Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G230900.1 | Wheat | nucleus | 91.89 | 92.39 |
| TraesCS1A01G231200.1 | Wheat | nucleus | 83.78 | 86.11 |
| HORVU1Hr1G058940.4 | Barley | nucleus, plastid | 71.89 | 71.51 |
| Zm00001d037941_P001 | Maize | nucleus | 65.41 | 62.69 |
| Os05t0361700-01 | Rice | nucleus | 64.32 | 60.1 |
| EES18078 | Sorghum | nucleus | 63.78 | 59.3 |
| GSMUA_Achr3P08180_001 | Banana | nucleus | 54.59 | 51.27 |
| AT2G47520.1 | Thale cress | nucleus | 26.49 | 28.66 |
| CDY51428 | Canola | nucleus | 27.57 | 26.02 |
| CDY27480 | Canola | nucleus | 27.03 | 25.91 |
| TraesCS5B01G315500.2 | Wheat | nucleus | 28.65 | 25.24 |
| GSMUA_Achr8P22500_001 | Banana | nucleus | 33.51 | 25.2 |
| Bra021401.1-P | Field mustard | nucleus | 27.57 | 23.94 |
| KRH12100 | Soybean | nucleus | 27.03 | 22.42 |
| TraesCS6B01G350000.1 | Wheat | nucleus | 22.7 | 22.34 |
| TraesCS6B01G350100.1 | Wheat | nucleus | 22.16 | 21.93 |
| TraesCS6B01G126700.1 | Wheat | nucleus, plastid | 27.57 | 21.61 |
| VIT_05s0077g01860.t01 | Wine grape | nucleus | 28.65 | 20.46 |
| KRH37061 | Soybean | nucleus | 25.95 | 20.25 |
| TraesCS2B01G304800.1 | Wheat | nucleus | 27.57 | 20.16 |
| TraesCS7B01G162100.1 | Wheat | plastid | 24.32 | 20.09 |
| TraesCS5B01G236900.1 | Wheat | nucleus | 25.95 | 19.83 |
| TraesCS1B01G389800.1 | Wheat | nucleus | 27.57 | 19.69 |
| TraesCS1B01G389900.1 | Wheat | nucleus | 28.11 | 19.48 |
| TraesCS6B01G350400.1 | Wheat | nucleus | 26.49 | 19.37 |
| Solyc01g065980.2.1 | Tomato | nucleus | 26.49 | 19.29 |
| TraesCS1B01G389700.1 | Wheat | nucleus | 25.41 | 18.73 |
| PGSC0003DMT400043311 | Potato | nucleus | 26.49 | 18.56 |
| TraesCS5B01G118200.1 | Wheat | nucleus | 32.97 | 17.89 |
| TraesCS7B01G062200.1 | Wheat | nucleus | 30.81 | 16.06 |
| TraesCS7B01G283900.1 | Wheat | nucleus | 23.78 | 15.77 |
| TraesCS4B01G299400.1 | Wheat | nucleus | 26.49 | 15.65 |
| TraesCS5B01G214400.1 | Wheat | nucleus | 30.81 | 14.77 |
| TraesCS4B01G299500.1 | Wheat | nucleus | 24.86 | 14.56 |
| TraesCS6B01G126600.1 | Wheat | nucleus | 28.11 | 14.21 |
| TraesCS7B01G324400.1 | Wheat | nucleus | 22.7 | 13.46 |
| TraesCS6B01G375400.1 | Wheat | nucleus | 28.11 | 13.07 |
| TraesCS6B01G427100.1 | Wheat | nucleus | 22.16 | 12.39 |
| TraesCS6B01G125900.1 | Wheat | nucleus | 25.41 | 12.21 |
| TraesCS7B01G278700.1 | Wheat | nucleus | 24.32 | 11.75 |
Protein Annotations
| Gene3D:3.30.730.10 | MapMan:35.1 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001471 | InterPro:IPR036955 |
| PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31190 | PANTHER:PTHR31190:SF70 | SMART:SM00380 |
| SUPFAM:SSF54171 | EnsemblPlantsGene:TraesCS1B01G243200 | EnsemblPlants:TraesCS1B01G243200.1 | TIGR:cd00018 | SEG:seg | : |
Description
No Description!
Coordinates
chr1B:+:432116718..432117475
Molecular Weight (calculated)
19239.6 Da
IEP (calculated)
9.114
GRAVY (calculated)
-0.423
Length
185 amino acids
Sequence
(BLAST)
(BLAST)
001: MCGGAVTADF VPAGARRPDG SSADVPGSSL TVTGEEVTEK SPAPGRKTAY RGIRRRPWGR WAAEIRDPRK GARVWLGTYA SAEEAARAYD VAARDIRGPK
101: AKLNFPPAVG APQEAAAVAG AGAPKKRRIV AAEESSASWS PLPAPASGGG GGTDSLRERM SGLEAFLGLE DGNVEPWEAV NLIME
101: AKLNFPPAVG APQEAAAVAG AGAPKKRRIV AAEESSASWS PLPAPASGGG GGTDSLRERM SGLEAFLGLE DGNVEPWEAV NLIME
001: MCGGAIISDY APLVTKAKGR KLTAEELWSE LDASAADDFW GFYSTSKLHP TNQVNVKEEA VKKEQATEPG KRRKRKNVYR GIRKRPWGKW AAEIRDPRKG
101: VRVWLGTFNT AEEAAMAYDV AAKQIRGDKA KLNFPDLHHP PPPNYTPPPS SPRSTDQPPA KKVCVVSQSE SELSQPSFPV ECIGFGNGDE FQNLSYGFEP
201: DYDLKQQISS LESFLELDGN TAEQPSQLDE SVSEVDMWML DDVIASYE
101: VRVWLGTFNT AEEAAMAYDV AAKQIRGDKA KLNFPDLHHP PPPNYTPPPS SPRSTDQPPA KKVCVVSQSE SELSQPSFPV ECIGFGNGDE FQNLSYGFEP
201: DYDLKQQISS LESFLELDGN TAEQPSQLDE SVSEVDMWML DDVIASYE
Arabidopsis Description
RAP2-3Ethylene-responsive transcription factor RAP2-3 [Source:UniProtKB/Swiss-Prot;Acc:P42736]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.