Factsheet for TraesCS6B01G350400.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G319600.1	Wheat	nucleus	88.14	90.28
TraesCS6D01G299100.1	Wheat	nucleus, plastid	93.28	79.46
TraesCS6B01G350000.1	Wheat	nucleus	54.15	72.87
TraesCS6B01G350100.1	Wheat	nucleus	53.36	72.19
KXG31168	Sorghum	nucleus	64.43	65.46
HORVU6Hr1G078510.5	Barley	nucleus	65.61	64.59
Os02t0764700-01	Rice	nucleus	58.89	61.57
Zm00001d052167_P001	Maize	nucleus	54.55	60.0
Zm00001d018158_P001	Maize	nucleus	54.55	58.47
TraesCS5B01G236900.1	Wheat	nucleus	37.94	39.67
TraesCS1B01G389700.1	Wheat	nucleus	37.15	37.45
TraesCS1B01G389900.1	Wheat	nucleus	38.34	36.33
TraesCS1B01G389800.1	Wheat	nucleus	35.18	34.36
TraesCS7B01G162100.1	Wheat	plastid	24.9	28.12
TraesCS1B01G243200.1	Wheat	nucleus	19.37	26.49
TraesCS5B01G315500.2	Wheat	nucleus	20.95	25.24
TraesCS6B01G126700.1	Wheat	nucleus, plastid	21.34	22.88
TraesCS5B01G118200.1	Wheat	nucleus	28.85	21.41
TraesCS2B01G304800.1	Wheat	nucleus	20.95	20.95
TraesCS4B01G299400.1	Wheat	nucleus	21.74	17.57
TraesCS4B01G299500.1	Wheat	nucleus	20.95	16.77
TraesCS7B01G283900.1	Wheat	nucleus	17.79	16.13
TraesCS6B01G375400.1	Wheat	nucleus	24.9	15.83
TraesCS6B01G126600.1	Wheat	nucleus	22.13	15.3
TraesCS6B01G125900.1	Wheat	nucleus	22.92	15.06
TraesCS7B01G062200.1	Wheat	nucleus	20.95	14.93
TraesCS5B01G214400.1	Wheat	nucleus	21.74	14.25
TraesCS7B01G278700.1	Wheat	nucleus	19.76	13.05
TraesCS6B01G427100.1	Wheat	nucleus	16.6	12.69
TraesCS7B01G324400.1	Wheat	nucleus	15.41	12.5

Protein Annotations

MapMan:15.5.7.1	Gene3D:3.30.730.10	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0006139	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955
PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31190	PANTHER:PTHR31190:SF80	SMART:SM00380
SUPFAM:SSF54171	EnsemblPlantsGene:TraesCS6B01G350400	EnsemblPlants:TraesCS6B01G350400.1	TIGR:cd00018	SEG:seg	:

Description

No Description!

Coordinates

chr6B:+:615605338..615606258

Molecular Weight (calculated)

26700.2 Da

IEP (calculated)

9.165

GRAVY (calculated)

-0.494

Length

253 amino acids

Sequence
(BLAST)

001: MVPRLERGGF QLPNSEQENS LFLRALISVV SGDTAAPAPH QLAPSTPPFA PAPATAAAAC ARCGVDGCLG CEFVAAAAAT TGSSSEGEEC SAASFVKNGG
101: VGKRRAGGGG SKFRGVRQRP WGKWAAEIRD PHRAVRKWLG TFDTAAEAAR AYDVAALEFR GHRAKLNFPA SSSSASASAS ATASSRAATQ PHPQRQQRPE
201: SPREKCGSNA SSPVHVPRLP EQGRPVAREQ EIWDGLHEIM MMDDGNFWSN PKP

Best Arabidopsis Sequence Match ( AT4G34410.1 )
(BLAST)

001: MHYPNNRTEF VGAPAPTRYQ KEQLSPEQEL SVIVSALQHV ISGENETAPC QGFSSDSTVI SAGMPRLDSD TCQVCRIEGC LGCNYFFAPN QRIEKNHQQE
101: EEITSSSNRR RESSPVAKKA EGGGKIRKRK NKKNGYRGVR QRPWGKFAAE IRDPKRATRV WLGTFETAED AARAYDRAAI GFRGPRAKLN FPFVDYTSSV
201: SSPVAADDIG AKASASASVS ATDSVEAEQW NGGGGDCNME EWMNMMMMMD FGNGDSSDSG NTIADMFQ

Arabidopsis Description

ERF109Ethylene-responsive transcription factor ERF109 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZ06]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.