CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX78930	Canola	cytosol	100.0	100.0
CDX99388	Canola	cytosol	99.83	99.83
Bra013385.1-P	Field mustard	cytosol	95.87	99.83
CDY01588	Canola	cytosol	97.69	97.69
CDX76485	Canola	cytosol	97.52	97.52
CDX98609	Canola	cytosol	97.52	97.52
CDY09282	Canola	cytosol	95.54	97.14
AT4G19210.1	Thale cress	cytosol	96.86	96.86
PGSC0003DMT400051207	Potato	cytosol	94.05	94.05
GSMUA_Achr7P14490_001	Banana	cytosol	92.73	92.73
GSMUA_Achr7P14480_001	Banana	cytosol	92.73	92.73
GSMUA_Achr10P...	Banana	cytosol	92.23	92.23
KRH28995	Soybean	endoplasmic reticulum	91.9	91.75
Solyc07g008340.2.1	Tomato	cytosol, nucleus, plastid	87.6	91.7
EER95217	Sorghum	cytosol	91.24	91.39
Os11t0546000-01	Rice	plasma membrane	90.74	90.89
VIT_02s0087g00770.t01	Wine grape	cytosol, mitochondrion	93.72	90.72
Solyc08g075360.1.1	Tomato	cytosol, plastid	89.92	89.77
TraesCS4A01G143000.4	Wheat	cytosol, golgi	89.26	89.4
TraesCS4B01G160000.1	Wheat	cytosol, golgi	89.09	89.24
HORVU4Hr1G038380.19	Barley	cytosol	88.93	88.93
TraesCS2B01G600300.1	Wheat	cytosol	87.27	87.42
TraesCS2D01G594500.1	Wheat	cytosol	87.11	87.25
TraesCSU01G036500.1	Wheat	cytosol	86.78	86.92
TraesCS4D01G159400.1	Wheat	cytosol	83.8	86.67
HORVU2Hr1G123150.4	Barley	cytosol	87.11	86.25
Zm00001d029044_P006	Maize	cytosol	91.41	85.21
Zm00001d047534_P007	Maize	cytosol	91.24	85.05
TraesCS1D01G220000.1	Wheat	cytosol	81.49	82.3
CDY60809	Canola	cytosol	81.49	81.76
TraesCS1B01G231900.1	Wheat	cytosol	80.66	81.47
HORVU0Hr1G005840.5	Barley	cytosol, peroxisome	47.44	81.3
TraesCS1A01G218400.1	Wheat	cytosol	80.83	81.23
CDX75723	Canola	cytosol	77.36	77.61
HORVU1Hr1G055810.1	Barley	mitochondrion	80.33	76.42
CDX82529	Canola	cytosol	70.08	76.26
Os02t0282900-01	Rice	plastid	72.56	72.2
KXG30050	Sorghum	cytosol	68.76	68.65
TraesCS7B01G045400.1	Wheat	cytosol	50.08	68.4
CDY40521	Canola	cytosol	5.45	63.46
CDY23627	Canola	cytosol	9.92	54.55
CDX71236	Canola	cytosol	23.64	53.56
CDY63778	Canola	cytosol	40.17	50.31
CDX97503	Canola	cytosol, extracellular	9.42	49.57
CDY53120	Canola	nucleus	28.59	35.23
CDY40520	Canola	cytosol	20.99	28.48
CDY43728	Canola	cytosol	32.23	26.0

Protein Annotations

MapMan:17.6.1	Gene3D:3.40.50.300	InterPro:4Fe4S_Fe-S-bd	InterPro:4Fe4S_Fe_S_CS	GO:A0A078EW61	InterPro:AAA+_ATPase
InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	EnsemblPlants:CDY05197	ProteinID:CDY05197	ProteinID:CDY05197.1	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0016787	GO:GO:0016887
EnsemblPlantsGene:GSBRNA2T00120003001	InterPro:IPR003439	InterPro:IPR017896	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF00037
PFAM:PF04068	PRINTS:PR01868	ScanProsite:PS00198	ScanProsite:PS00211	PFscan:PS50893	PFscan:PS51379
PANTHER:PTHR19248	PANTHER:PTHR19248:SF21	InterPro:RLI1	InterPro:RLI_dom_1	InterPro:RNaseL-inhib_metal-bd_dom	SMART:SM00382
SUPFAM:SSF52540	SUPFAM:SSF54862	UniParc:UPI0004EF2CDA	:	:	:

Description

BnaC05g46060D

Coordinates

chrLK031960:+:275440..278818

Molecular Weight (calculated)

68289.7 Da

IEP (calculated)

8.038

GRAVY (calculated)

-0.236

Length

605 amino acids

Sequence
(BLAST)

001: MADRLTRIAI VSADRCKPKK CRQECKKSCP VVKTGKLCIE VTVGSKVAFI SEELCIGCGI CVKKCPFEAI QIINLPRDLE KDTTHRYGPN TFKLHRLPVP
101: RPGQVLGLVG TNGIGKSTAL KILAGKLKPN LGRFTNPPDW QEILTHFRGS ELQNYFTRIL EDNLKAIIKP QYVDHIPKAV RGNVGEVLDQ KDERNMKAEL
201: CADLELNQVI DRDVVNLSGG ELQRFAIAVV AIQNAEIYMF DEPSSYLDVK QRLKAAQVVR SLLRPNSYVI VVEHDLSVLD YLSDFICCLY GKPGAYGVVT
301: LPFSVREGIN IFLAGFVPTE NLRFRDESLT FKVSETPQES AEEIQSYARY KYPTMTKTQG NFRLKVSEGE FTDSQIIVML GENGTGKTTF IRMLAGLLKP
401: DETEGSDIEI PEFNVSYKPQ KISPKFENSV RHLLHQKIRD SYMHPQFVSD VMKPLQIEQL MDQQVVNLSG GELQRVALAL CLGKPADIYL IDEPSAYLDS
501: EQRIVASKVI KRFILHAKKT AFVVEHDFIM ATYLADRVIV YEGQPSIDCT ANCPQSLLTG MNLFLSHLNI TFRRDPTNFR PRINKLESTK DREQKSAGSY
601: YYLDD

Best Arabidopsis Sequence Match ( AT4G19210.1 )
(BLAST)

001: MADRLTRIAI VSSDRCKPKK CRQECKKSCP VVKTGKLCIE VTVGSKLAFI SEELCIGCGI CVKKCPFEAI QIINLPRDLE KDTTHRYGAN TFKLHRLPVP
101: RPGQVLGLVG TNGIGKSTAL KILAGKLKPN LGRFTSPPDW QEILTHFRGS ELQNYFTRIL EDNLKAIIKP QYVDHIPRAV KGNVGEVLDQ KDERDKKAEL
201: CADLELNQVI DRDVENLSGG ELQRFAIAVV AIQNAEIYMF DEPSSYLDVK QRLKAAQVVR SLLRPNSYVI VVEHDLSVLD YLSDFICCLY GKPGAYGVVT
301: LPFSVREGIN IFLAGFVPTE NLRFRDESLT FKVAETPQES AEEIQSYARY KYPTMTKTQG NFRLRVSEGE FTDSQIIVML GENGTGKTTF IRMLAGLLKP
401: DDTEGPDREI PEFNVSYKPQ KISPKFQNSV RHLLHQKIRD SYMHPQFMSD VMKPLQIEQL MDQEVVNLSG GELQRVALTL CLGKPADIYL IDEPSAYLDS
501: EQRIVASKVI KRFILHAKKT AFVVEHDFIM ATYLADRVIV YEGQPSIDCT ANCPQSLLSG MNLFLSHLNI TFRRDPTNFR PRINKLESTK DREQKSAGSY
601: YYLDD

Arabidopsis Description

ABCE2ABC transporter E family member 2 [Source:UniProtKB/Swiss-Prot;Acc:Q8LPJ4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.