Factsheet for TraesCS1D01G220000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G231900.1	Wheat	cytosol	98.16	98.16
TraesCS1A01G218400.1	Wheat	cytosol	98.33	97.84
HORVU1Hr1G055810.1	Barley	mitochondrion	97.83	92.14
TraesCS2D01G594500.1	Wheat	cytosol	85.14	84.44
GSMUA_Achr7P14490_001	Banana	cytosol	85.14	84.3
GSMUA_Achr7P14480_001	Banana	cytosol	84.97	84.13
GSMUA_Achr10P...	Banana	cytosol	84.97	84.13
PGSC0003DMT400051207	Potato	cytosol	83.81	82.98
KRH28995	Soybean	endoplasmic reticulum	82.97	82.01
Bra013385.1-P	Field mustard	cytosol	79.47	81.93
TraesCS4D01G159400.1	Wheat	cytosol	79.63	81.54
Solyc07g008340.2.1	Tomato	cytosol, nucleus, plastid	78.63	81.49
CDY05197	Canola	cytosol	82.3	81.49
CDX99388	Canola	cytosol	82.3	81.49
CDX78930	Canola	cytosol	82.3	81.49
CDY01588	Canola	cytosol	81.97	81.16
CDX76485	Canola	cytosol	81.97	81.16
AT4G19210.1	Thale cress	cytosol	81.97	81.16
CDX98609	Canola	cytosol	81.8	80.99
Bra020966.1-P	Field mustard	cytosol	81.8	80.99
VIT_02s0087g00770.t01	Wine grape	cytosol, mitochondrion	84.14	80.64
CDY09282	Canola	cytosol	79.97	80.5
Bra012553.1-P	Field mustard	cytosol	81.3	80.5
Solyc08g075360.1.1	Tomato	cytosol, plastid	81.14	80.2
Os02t0282900-01	Rice	plastid	72.45	71.38
KXG30050	Sorghum	cytosol	70.12	69.31

Protein Annotations

MapMan:17.6.1	Gene3D:3.40.50.300	InterPro:4Fe4S_Fe-S-bd	InterPro:4Fe4S_Fe_S_CS	InterPro:AAA+_ATPase	InterPro:ABC_transporter-like
InterPro:ABC_transporter_CS	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524
GO:GO:0016787	GO:GO:0016887	InterPro:IPR003439	InterPro:IPR017896	InterPro:P-loop_NTPase	PFAM:PF00005
PFAM:PF00037	PFAM:PF04068	PRINTS:PR01868	ScanProsite:PS00198	ScanProsite:PS00211	PFscan:PS50893
PFscan:PS51379	PANTHER:PTHR19248	PANTHER:PTHR19248:SF21	InterPro:RLI1	InterPro:RLI_dom_1	InterPro:RNaseL-inhib_metal-bd_dom
SMART:SM00382	SUPFAM:SSF52540	SUPFAM:SSF54862	EnsemblPlantsGene:TraesCS1D01G220000	EnsemblPlants:TraesCS1D01G220000.1	TIGR:cd03236
TIGR:cd03237	:	:	:	:	:

Description

No Description!

Coordinates

chr1D:+:307826629..307831137

Molecular Weight (calculated)

67270.6 Da

IEP (calculated)

8.280

GRAVY (calculated)

-0.244

Length

599 amino acids

Sequence
(BLAST)

001: MAARIAIINE DRCKPKKCRQ ECRKSCPVVK TGKHCIEVTP ESKTAFISEE LCIGCGICVK KCPFGAIQII NLPKDLDKDT THRYGPNTFK LHRLPVPRPG
101: QVLGLVGANG IGKSTALKVL CGKLKPNLGK FDNPPDWQEI LTYFRGSELQ NYFTRLLEDN LKAIIKRQDV ESIPKAVQGN VGQLLDKLDQ RGVKAQLCID
201: LELNQVLDRN VEDLSGGELQ RFAIAGTAAQ SAEIYMFDEP SVYLDVKQRL KAAQVIRSLL RANSYVIVVE HDLSVLDYMS DFICCSYGKP GAFGVVTLPF
301: SVREGINVFL AGFVPTENLR FRDESLTFKI VEAQENAEEI ETYQRYKYPT MSKIIGNFKL TVMEGEFTDS QIVVMLGENG TGKTTFIKML AGRLKPDTVE
401: GAEIEIPKFY VSHKPQELET KFQGTVSQLL HQKIPDSCAH PQFRSDVIKP LQIEQLMDRQ VTNLSGGERQ RVALCLCLGK PADIYLIDEP SASLDSEQRI
501: VASKVIKRFI LHAKKTAFVV EHDFIMATYL ADKVIVYEGR PSVDCTANAP QTLLSGMNKF LSQLDITFRR DPTNYRPRIN KLDSTKDKEQ KSVGSYYYL

Best Arabidopsis Sequence Match ( AT3G13640.1 )
(BLAST)

001: MSDRLTRIAI VSEDRCKPKK CRQECKKSCP VVKTGKLCIE VGSTSKSAFI SEELCIGCGI CVKKCPFEAI QIINLPKDLA KDTTHRYGAN GFKLHRLPIP
101: RPGQVLGLVG TNGIGKSTAL KILAGKLKPN LGRFNTPPDW EEILTHFRGS ELQSYFIRVV EENLKTAIKP QHVDYIKEVV RGNLGKMLEK LDERGLMEEI
201: CADMELNQVL EREARQVSGG ELQRFAIAAV FVKKADIYMF DEPSSYLDVR QRLKAAQVIR SLLRHDSYVI VVEHDLSVLD YLSDFVCCLY GKPGAYGVVT
301: LPFSVREGIN VFLAGFIPTE NLRFRDESLT FRVSETTQEN DGEVKSYARY KYPNMTKQLG DFKLEVMEGE FTDSQIIVML GENGTGKTTF IRMLAGAFPR
401: EEGVQSEIPE FNVSYKPQGN DSKRECTVRQ LLHDKIRDAC AHPQFMSDVI RPLQIEQLMD QVVKTLSGGE KQRVAITLCL GKPADIYLID EPSAHLDSEQ
501: RITASKVIKR FILHAKKTAF IVEHDFIMAT YLADRVIVYE GQPAVKCIAH SPQSLLSGMN HFLSHLNITF RRDPTNFRPR INKLESIKDK EQKTAGSYYY
601: LDD

Arabidopsis Description

ABCE1ABC transporter E family member 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LID6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.