CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os02t0282900-01	Rice	plastid	83.33	83.06
TraesCS7B01G045400.1	Wheat	cytosol	58.91	80.59
GSMUA_Achr7P14490_001	Banana	cytosol	71.62	71.74
GSMUA_Achr7P14480_001	Banana	cytosol	71.12	71.24
GSMUA_Achr10P...	Banana	cytosol	70.79	70.91
EER95217	Sorghum	cytosol	70.13	70.36
KRH28995	Soybean	endoplasmic reticulum	70.3	70.3
TraesCS1D01G220000.1	Wheat	cytosol	69.31	70.12
TraesCS1A01G218400.1	Wheat	cytosol	69.31	69.77
Bra013385.1-P	Field mustard	cytosol	66.83	69.71
PGSC0003DMT400051207	Potato	cytosol	69.47	69.59
VIT_02s0087g00770.t01	Wine grape	cytosol, mitochondrion	70.96	68.8
CDY05197	Canola	cytosol	68.65	68.76
CDX99388	Canola	cytosol	68.65	68.76
CDX98609	Canola	cytosol	68.65	68.76
CDX78930	Canola	cytosol	68.65	68.76
CDY01588	Canola	cytosol	68.48	68.59
CDX76485	Canola	cytosol	68.48	68.59
Bra020966.1-P	Field mustard	cytosol	68.32	68.43
AT4G19210.1	Thale cress	cytosol	68.32	68.43
Solyc07g008340.2.1	Tomato	cytosol, nucleus, plastid	65.18	68.34
Bra012553.1-P	Field mustard	cytosol	68.15	68.26
CDY09282	Canola	cytosol	67.0	68.24
Solyc08g075360.1.1	Tomato	cytosol, plastid	67.82	67.82
HORVU1Hr1G055810.1	Barley	mitochondrion	68.81	65.57

Protein Annotations

MapMan:17.6.1	Gene3D:3.40.50.300	InterPro:4Fe4S_Fe-S-bd	InterPro:4Fe4S_Fe_S_CS	UniProt:A0A194YQE8	InterPro:AAA+_ATPase
InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005524	GO:GO:0016787	GO:GO:0016887	InterPro:IPR003439	InterPro:IPR017896	EnsemblPlants:KXG30050
ProteinID:KXG30050	ProteinID:KXG30050.1	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF00037	PFAM:PF04068
PRINTS:PR01868	ScanProsite:PS00198	ScanProsite:PS00211	PFscan:PS50893	PFscan:PS51379	PANTHER:PTHR19248
PANTHER:PTHR19248:SF18	InterPro:RLI1	InterPro:RLI_dom_1	InterPro:RNaseL-inhib_metal-bd_dom	SMART:SM00382	EnsemblPlantsGene:SORBI_3004G128100
SUPFAM:SSF52540	SUPFAM:SSF54862	UniParc:UPI0007F226EC	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr4:-:16068918..16075291

Molecular Weight (calculated)

68101.7 Da

IEP (calculated)

8.224

GRAVY (calculated)

-0.238

Length

606 amino acids

Sequence
(BLAST)

001: MSGRSSRIAV VVEDRCRPSK CGQECRRRCP VNATGRQCIE VTQSSKVSLI SEDLCVGCGI CVKVCPFNAI QIINLPKELD KETTHRYGPN SFKLHRLPVP
101: RPGKVLGLVG TNGIGKSTAL NILAGMLKPN LGKFMDPPNW DDILKHFHGK ELQKYFTCFL EDKMKTTIKP QFVEHIAKSV QGTVGNQLNK IDKRQAQDTL
201: CDFLDLNQIM DRNISDLSGG ELQRFAIAAR AMEDVDVYMF DEPSCYLDVK QRLKAAQVIR SLLQPKNYVI VVEHDLSILD YLSDYICCLY GSPGAYGVVT
301: LPFSVREGIN IFLNGFIPTE NMRFREEKLT FRVTESAEET TEGETYQSYK YPTMIKTSSG FKLSVMKGSF NDSQIIVLLG ENGTGKTTFI RMLAGQVKPD
401: RVGDEEVDMP AYVVSYKPQE LILIPKISAT VRELLHRKIP GSCSDAQFRS DVMKPLKIEE LMDRKVKNFS GGELQRVALC LCLGKAADIY LIDEPSAHLD
501: SEQRLLAAKV IKRFILHQKK TAFIVEHDFI MATYLADKVV VFEGKPSVDC TANVPEPLVS GMNRFLSHLD VTFRTDPTTH RPRINKLGST KDTEQKASGC
601: HYYLDY

Best Arabidopsis Sequence Match ( AT4G19210.1 )
(BLAST)

001: MADRLTRIAI VSSDRCKPKK CRQECKKSCP VVKTGKLCIE VTVGSKLAFI SEELCIGCGI CVKKCPFEAI QIINLPRDLE KDTTHRYGAN TFKLHRLPVP
101: RPGQVLGLVG TNGIGKSTAL KILAGKLKPN LGRFTSPPDW QEILTHFRGS ELQNYFTRIL EDNLKAIIKP QYVDHIPRAV KGNVGEVLDQ KDERDKKAEL
201: CADLELNQVI DRDVENLSGG ELQRFAIAVV AIQNAEIYMF DEPSSYLDVK QRLKAAQVVR SLLRPNSYVI VVEHDLSVLD YLSDFICCLY GKPGAYGVVT
301: LPFSVREGIN IFLAGFVPTE NLRFRDESLT FKVAETPQES AEEIQSYARY KYPTMTKTQG NFRLRVSEGE FTDSQIIVML GENGTGKTTF IRMLAGLLKP
401: DDTEGPDREI PEFNVSYKPQ KISPKFQNSV RHLLHQKIRD SYMHPQFMSD VMKPLQIEQL MDQEVVNLSG GELQRVALTL CLGKPADIYL IDEPSAYLDS
501: EQRIVASKVI KRFILHAKKT AFVVEHDFIM ATYLADRVIV YEGQPSIDCT ANCPQSLLSG MNLFLSHLNI TFRRDPTNFR PRINKLESTK DREQKSAGSY
601: YYLDD

Arabidopsis Description

ABCE2ABC transporter E family member 2 [Source:UniProtKB/Swiss-Prot;Acc:Q8LPJ4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.