CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX76485	Canola	cytosol	99.33	97.69
Bra020966.1-P	Field mustard	cytosol	99.16	97.52
CDY01588	Canola	cytosol	98.99	97.36
CDX98609	Canola	cytosol	98.82	97.19
CDX99388	Canola	cytosol	97.31	95.7
CDX78930	Canola	cytosol	97.14	95.54
CDY05197	Canola	cytosol	97.14	95.54
AT4G19210.1	Thale cress	cytosol	96.97	95.37
PGSC0003DMT400051207	Potato	cytosol	93.11	91.57
GSMUA_Achr10P...	Banana	cytosol	92.61	91.07
GSMUA_Achr7P14490_001	Banana	cytosol	92.44	90.91
GSMUA_Achr7P14480_001	Banana	cytosol	92.1	90.58
KRH28995	Soybean	endoplasmic reticulum	91.76	90.1
EER95217	Sorghum	cytosol	91.09	89.74
Os11t0546000-01	Rice	plasma membrane	90.76	89.4
Solyc07g008340.2.1	Tomato	cytosol, nucleus, plastid	86.72	89.27
VIT_02s0087g00770.t01	Wine grape	cytosol, mitochondrion	92.94	88.48
Solyc08g075360.1.1	Tomato	cytosol, plastid	89.58	87.95
TraesCS4A01G143000.4	Wheat	cytosol, golgi	89.08	87.75
TraesCS4B01G160000.1	Wheat	cytosol, golgi	88.91	87.58
HORVU4Hr1G038380.19	Barley	cytosol	88.74	87.27
TraesCS4D01G159400.1	Wheat	cytosol	83.7	85.13
TraesCS2B01G600300.1	Wheat	cytosol	86.39	85.1
TraesCS2D01G594500.1	Wheat	cytosol	86.22	84.93
TraesCSU01G036500.1	Wheat	cytosol	86.05	84.77
HORVU2Hr1G123150.4	Barley	cytosol	86.22	83.96
Zm00001d029044_P006	Maize	cytosol	91.26	83.67
Zm00001d047534_P007	Maize	cytosol	91.09	83.51
TraesCS1D01G220000.1	Wheat	cytosol	80.5	79.97
TraesCS1B01G231900.1	Wheat	cytosol	80.17	79.63
CDY60809	Canola	cytosol	80.67	79.6
TraesCS1A01G218400.1	Wheat	cytosol	80.0	79.07
HORVU0Hr1G005840.5	Barley	cytosol, peroxisome	45.88	77.34
CDX75723	Canola	cytosol	76.13	75.12
HORVU1Hr1G055810.1	Barley	mitochondrion	79.5	74.37
CDX82529	Canola	cytosol	68.57	73.38
Os02t0282900-01	Rice	plastid	71.76	70.23
TraesCS7B01G045400.1	Wheat	cytosol	50.92	68.4
KXG30050	Sorghum	cytosol	68.24	67.0
CDY40521	Canola	cytosol	5.38	61.54
CDY23627	Canola	cytosol	10.08	54.55
CDX71236	Canola	cytosol	23.03	51.31
CDY63778	Canola	cytosol	40.34	49.69
CDX97503	Canola	cytosol, extracellular	9.58	49.57
CDY53120	Canola	nucleus	28.07	34.01
CDY40520	Canola	cytosol	20.5	27.35
CDY43728	Canola	cytosol	31.76	25.2

Protein Annotations

MapMan:17.6.1	Gene3D:3.40.50.300	GO:A0A078F852	UniProt:A0A078F852	InterPro:AAA+_ATPase	InterPro:ABC_transporter-like
InterPro:ABC_transporter_CS	EnsemblPlants:CDY09282	ProteinID:CDY09282	ProteinID:CDY09282.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0016787	GO:GO:0016887	EnsemblPlantsGene:GSBRNA2T00001571001
InterPro:IPR003439	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF04068	PRINTS:PR01868	ScanProsite:PS00211
PFscan:PS50893	PANTHER:PTHR19248	PANTHER:PTHR19248:SF21	InterPro:RLI1	InterPro:RLI_dom_1	InterPro:RNaseL-inhib_metal-bd_dom
SMART:SM00382	SUPFAM:SSF52540	UniParc:UPI0004EEE4C0	:	:	:

Description

BnaC03g63120DBnaC03g63120D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F852]

Coordinates

chrLK031994:+:346046..349603

Molecular Weight (calculated)

67286.4 Da

IEP (calculated)

7.970

GRAVY (calculated)

-0.239

Length

595 amino acids

Sequence
(BLAST)

001: MADRLTRIAI VSSDRCKPKK CRQECKKSCP VVKTGKLCIE VTVGSKLAFI SEELCIGCAI QIINLPRDLE KDTTHRYGAN TFKLHRLPVP RPGQVLGFVG
101: TNGIGKSTAL KILAGKLKPN LGRFTNPPDW QEILTHFRGS ELQNYFTRIL EDNLKAIIKP QYVDHIPKAV RGNVGEVLDQ KDERNKKAEL CADLELNQVI
201: DRAVENLSGG ELQRFAIAVV AIQNAEIYMF DEPSSYLDVK QRLKAAQVVR SLLRPNSYVI VVEHDLSVLD YLSDFICCLY GKPGAYGVVT LPFSVREGIN
301: IFLAGFVPTE NLRFRDESLT FKVAETPQES AEEIQSYARY KYPTMTKTQG SFRLKVTEGE FTDSQIIVML GENGTGKTTF IRMLAGLLKP DETEESDIEI
401: PEFNVSYKPQ KISPKFQNSV RHLLHQKIRD SYMHPQFVSD VMKPLQIEQL MDQEVVNLSG GELQRVALAL CLGKPADIYL IDEPSAYLDS EQRIVASKVI
501: KRFILHAKKT AFIVEHDFIM ATYLADRVIV YEGQPSIDCI ANCPQSLLSG MNLFLSHLNI TFRRDPTNFR PRINKLESTK DREQKSAGLY YYLDD

Best Arabidopsis Sequence Match ( AT3G13640.1 )
(BLAST)

001: MSDRLTRIAI VSEDRCKPKK CRQECKKSCP VVKTGKLCIE VGSTSKSAFI SEELCIGCGI CVKKCPFEAI QIINLPKDLA KDTTHRYGAN GFKLHRLPIP
101: RPGQVLGLVG TNGIGKSTAL KILAGKLKPN LGRFNTPPDW EEILTHFRGS ELQSYFIRVV EENLKTAIKP QHVDYIKEVV RGNLGKMLEK LDERGLMEEI
201: CADMELNQVL EREARQVSGG ELQRFAIAAV FVKKADIYMF DEPSSYLDVR QRLKAAQVIR SLLRHDSYVI VVEHDLSVLD YLSDFVCCLY GKPGAYGVVT
301: LPFSVREGIN VFLAGFIPTE NLRFRDESLT FRVSETTQEN DGEVKSYARY KYPNMTKQLG DFKLEVMEGE FTDSQIIVML GENGTGKTTF IRMLAGAFPR
401: EEGVQSEIPE FNVSYKPQGN DSKRECTVRQ LLHDKIRDAC AHPQFMSDVI RPLQIEQLMD QVVKTLSGGE KQRVAITLCL GKPADIYLID EPSAHLDSEQ
501: RITASKVIKR FILHAKKTAF IVEHDFIMAT YLADRVIVYE GQPAVKCIAH SPQSLLSGMN HFLSHLNITF RRDPTNFRPR INKLESIKDK EQKTAGSYYY
601: LDD

Arabidopsis Description

ABCE1ABC transporter E family member 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LID6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.