Factsheet for HORVU4Hr1G038380.19

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G160000.1	Wheat	cytosol, golgi	99.67	99.83
TraesCS4A01G143000.4	Wheat	cytosol, golgi	99.34	99.5
TraesCS4D01G159400.1	Wheat	cytosol	93.55	96.75
EER95217	Sorghum	cytosol	95.54	95.7
Os11t0546000-01	Rice	plasma membrane	95.54	95.7
GSMUA_Achr7P14490_001	Banana	cytosol	92.56	92.56
GSMUA_Achr7P14480_001	Banana	cytosol	91.9	91.9
GSMUA_Achr10P...	Banana	cytosol	91.57	91.57
HORVU2Hr1G123150.4	Barley	cytosol	91.9	91.0
KRH28995	Soybean	endoplasmic reticulum	90.25	90.1
PGSC0003DMT400051207	Potato	cytosol	89.92	89.92
CDY01588	Canola	cytosol	89.42	89.42
CDX76485	Canola	cytosol	89.42	89.42
CDX98609	Canola	cytosol	89.26	89.26
Bra020966.1-P	Field mustard	cytosol	89.26	89.26
Zm00001d029044_P006	Maize	cytosol	95.7	89.21
Bra013385.1-P	Field mustard	cytosol	85.62	89.16
AT4G19210.1	Thale cress	cytosol	89.09	89.09
CDY05197	Canola	cytosol	88.93	88.93
CDX99388	Canola	cytosol	88.93	88.93
CDX78930	Canola	cytosol	88.93	88.93
Bra012553.1-P	Field mustard	cytosol	88.76	88.76
Zm00001d047534_P007	Maize	cytosol	95.21	88.75
CDY09282	Canola	cytosol	87.27	88.74
VIT_02s0087g00770.t01	Wine grape	cytosol, mitochondrion	91.24	88.32
Solyc07g008340.2.1	Tomato	cytosol, nucleus, plastid	84.13	88.06
Solyc08g075360.1.1	Tomato	cytosol, plastid	87.11	86.96
HORVU0Hr1G005840.5	Barley	cytosol, peroxisome	50.58	86.69
HORVU1Hr1G055810.1	Barley	mitochondrion	82.98	78.93

Protein Annotations

MapMan:17.6.1	Gene3D:3.40.50.300	InterPro:4Fe4S_Fe-S-bd	InterPro:4Fe4S_Fe_S_CS	UniProt:A0A287NTT5	InterPro:AAA+_ATPase
InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005524	GO:GO:0016787	GO:GO:0016887	EnsemblPlantsGene:HORVU4Hr1G038380	EnsemblPlants:HORVU4Hr1G038380.19	InterPro:IPR003439
InterPro:IPR017896	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF00037	PFAM:PF04068	PRINTS:PR01868
ScanProsite:PS00198	ScanProsite:PS00211	PFscan:PS50893	PFscan:PS51379	PANTHER:PTHR19248	PANTHER:PTHR19248:SF21
InterPro:RLI1	InterPro:RLI_dom_1	InterPro:RNaseL-inhib_metal-bd_dom	SMART:SM00382	SUPFAM:SSF52540	SUPFAM:SSF54862
UniParc:UPI000B465F10	:	:	:	:	:

Description

No Description!

Coordinates

chrchr4H:+:289569022..289590391

Molecular Weight (calculated)

68271.7 Da

IEP (calculated)

7.907

GRAVY (calculated)

-0.244

Length

605 amino acids

Sequence
(BLAST)

001: QMADRLTRIA IVSEDKCKPK KCRQECKKSC PVVKTGKLCI EVSPAAKLAF ISEELCIGCG ICVKKCPFDA IEIINLPKDL EKDTTHRYGP NTFKLHRLPV
101: PRPGQVLGLV GTNGIGKSTA LKVLAGKLKP NLGRFKNPPD WQEILTYFRG SELQNYFTRI LEDNLKAIIK PQYVDHIPKA VQGNVGQVLE QKDERDMKNE
201: LCVDLELNQV IDRNVGDLSG GELQRFAIAV VAVQSAEIYM FDEPSSYLDV KQRLKAARVI RSLLRSNSYV IVVEHDLSVL DYLSDFICCL YGKPGAYGVV
301: TLPFSVREGI NIFLAGFVPT ENLRFRDESL TFKIAETQEN AEEVATYQRY KYPNMSKTQG NFKLSVVEGE FTDSQIVVML GENGTGKTTF IRMLAGLLKP
401: DTMEGTEVEI PEFNVSYKPQ KISPKFQHPV RHLLHSKIRD SYTHPQFVSD VMKPLQIEQL MDQEVINLSG GELQRVALCL CLGKPADIYL IDEPSAYLDS
501: EQRIVASKVI KRFILHAKKT AFIVEHDFIM ATYLADKVIV YEGLASIDCT ANAPQSLVSG MNKFLSHLDI TFRRDPTNYR PRINKLESTK DREQKNAGSY
601: YYLDD

Best Arabidopsis Sequence Match ( AT3G13640.1 )
(BLAST)

001: MSDRLTRIAI VSEDRCKPKK CRQECKKSCP VVKTGKLCIE VGSTSKSAFI SEELCIGCGI CVKKCPFEAI QIINLPKDLA KDTTHRYGAN GFKLHRLPIP
101: RPGQVLGLVG TNGIGKSTAL KILAGKLKPN LGRFNTPPDW EEILTHFRGS ELQSYFIRVV EENLKTAIKP QHVDYIKEVV RGNLGKMLEK LDERGLMEEI
201: CADMELNQVL EREARQVSGG ELQRFAIAAV FVKKADIYMF DEPSSYLDVR QRLKAAQVIR SLLRHDSYVI VVEHDLSVLD YLSDFVCCLY GKPGAYGVVT
301: LPFSVREGIN VFLAGFIPTE NLRFRDESLT FRVSETTQEN DGEVKSYARY KYPNMTKQLG DFKLEVMEGE FTDSQIIVML GENGTGKTTF IRMLAGAFPR
401: EEGVQSEIPE FNVSYKPQGN DSKRECTVRQ LLHDKIRDAC AHPQFMSDVI RPLQIEQLMD QVVKTLSGGE KQRVAITLCL GKPADIYLID EPSAHLDSEQ
501: RITASKVIKR FILHAKKTAF IVEHDFIMAT YLADRVIVYE GQPAVKCIAH SPQSLLSGMN HFLSHLNITF RRDPTNFRPR INKLESIKDK EQKTAGSYYY
601: LDD

Arabidopsis Description

ABCE1ABC transporter E family member 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LID6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.