Factsheet for HORVU2Hr1G123150.4

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G594500.1	Wheat	cytosol	96.73	97.85
TraesCSU01G036500.1	Wheat	cytosol	96.56	97.68
TraesCS2B01G600300.1	Wheat	cytosol	96.56	97.68
HORVU4Hr1G038380.19	Barley	cytosol	91.0	91.9
HORVU0Hr1G005840.5	Barley	cytosol, peroxisome	53.03	91.78
GSMUA_Achr7P14490_001	Banana	cytosol	89.36	90.25
GSMUA_Achr7P14480_001	Banana	cytosol	88.87	89.75
GSMUA_Achr10P...	Banana	cytosol	87.89	88.76
Bra013385.1-P	Field mustard	cytosol	82.98	87.26
PGSC0003DMT400051207	Potato	cytosol	86.25	87.11
CDX78930	Canola	cytosol	86.25	87.11
CDX99388	Canola	cytosol	86.25	87.11
CDY05197	Canola	cytosol	86.25	87.11
KRH28995	Soybean	endoplasmic reticulum	86.25	86.96
CDX76485	Canola	cytosol	86.09	86.94
CDY01588	Canola	cytosol	86.09	86.94
CDX98609	Canola	cytosol	85.92	86.78
Bra020966.1-P	Field mustard	cytosol	85.92	86.78
AT4G19210.1	Thale cress	cytosol	85.76	86.61
Bra012553.1-P	Field mustard	cytosol	85.43	86.28
CDY09282	Canola	cytosol	83.96	86.22
VIT_02s0087g00770.t01	Wine grape	cytosol, mitochondrion	87.72	85.76
Solyc07g008340.2.1	Tomato	cytosol, nucleus, plastid	80.85	85.47
Solyc08g075360.1.1	Tomato	cytosol, plastid	83.63	84.32
HORVU1Hr1G055810.1	Barley	mitochondrion	82.65	79.4

Protein Annotations

MapMan:17.6.1	Gene3D:3.40.50.300	InterPro:4Fe4S_Fe-S-bd	InterPro:4Fe4S_Fe_S_CS	UniProt:A0A287JRE8	InterPro:AAA+_ATPase
InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005524	GO:GO:0016787	GO:GO:0016887	EnsemblPlantsGene:HORVU2Hr1G123150	EnsemblPlants:HORVU2Hr1G123150.4	InterPro:IPR003439
InterPro:IPR017896	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF00037	PFAM:PF04068	PRINTS:PR01868
ScanProsite:PS00198	ScanProsite:PS00211	PFscan:PS50893	PFscan:PS51379	PANTHER:PTHR19248	PANTHER:PTHR19248:SF21
InterPro:RLI1	InterPro:RLI_dom_1	InterPro:RNaseL-inhib_metal-bd_dom	SMART:SM00382	SUPFAM:SSF52540	SUPFAM:SSF54862
UniParc:UPI000B460385	:	:	:	:	:

Description

No Description!

Coordinates

chrchr2H:-:754735268..754741671

Molecular Weight (calculated)

68791.4 Da

IEP (calculated)

7.560

GRAVY (calculated)

-0.231

Length

611 amino acids

Sequence
(BLAST)

001: PPPLAGEMAD RLTRIAIVNE DRCKPKKCRQ ECKKSCPVVK TGKLCIEVGP ASKVSFISEE LCIGCGICVK KCPFDAIEII NLPKDLEKDT THRYGPNTFK
101: LHRLPVPRPG QVLGLVGTNG IGKSTALKVL AGKLKPNLGR FKNPPDWQEI LTYFRGSELQ NYFTRLLEDN LKAIIKPQYV DHIPKAVQGN VGQVLEQKDE
201: RDMKAELCVD LELNQVIDRN VGELSGGELQ RFAIAVVAVQ SAEIYMFDEP SSYLDVKQRL KAAQVIRSLL RSNSYVIVVE HDLSVLDYLS DFICCLYGKP
301: GAYGVVTLPF SVREGINIFL AGFVPTENLR FRDESLTFKI VDTQDNPEEI EAYQRYKYPA MSKTLGNFKL TVMEGEFTDS QIVVMLGENG TGKTTFIRLL
401: AGHLKPDAVE GVEIEIPEFN VSYKPQKISP KFPGSVRQLL HKKIRDSYTH PQFISDVVKP LQIEQLMDQE VMNLSGGELQ RVALCLCLGQ PAEIYLIDEP
501: SAYLDSEQRI VASKVIKRFI LHAKKTAFIV EHDFIMATYL ADKVVVYEGR PSVECTACTP QSLVSGMNRF LSHLDITFRR DPTNYRPRIN KMDSTKDREQ
601: KAAGSYYYLD D

Best Arabidopsis Sequence Match ( AT3G13640.1 )
(BLAST)

001: MSDRLTRIAI VSEDRCKPKK CRQECKKSCP VVKTGKLCIE VGSTSKSAFI SEELCIGCGI CVKKCPFEAI QIINLPKDLA KDTTHRYGAN GFKLHRLPIP
101: RPGQVLGLVG TNGIGKSTAL KILAGKLKPN LGRFNTPPDW EEILTHFRGS ELQSYFIRVV EENLKTAIKP QHVDYIKEVV RGNLGKMLEK LDERGLMEEI
201: CADMELNQVL EREARQVSGG ELQRFAIAAV FVKKADIYMF DEPSSYLDVR QRLKAAQVIR SLLRHDSYVI VVEHDLSVLD YLSDFVCCLY GKPGAYGVVT
301: LPFSVREGIN VFLAGFIPTE NLRFRDESLT FRVSETTQEN DGEVKSYARY KYPNMTKQLG DFKLEVMEGE FTDSQIIVML GENGTGKTTF IRMLAGAFPR
401: EEGVQSEIPE FNVSYKPQGN DSKRECTVRQ LLHDKIRDAC AHPQFMSDVI RPLQIEQLMD QVVKTLSGGE KQRVAITLCL GKPADIYLID EPSAHLDSEQ
501: RITASKVIKR FILHAKKTAF IVEHDFIMAT YLADRVIVYE GQPAVKCIAH SPQSLLSGMN HFLSHLNITF RRDPTNFRPR INKLESIKDK EQKTAGSYYY
601: LDD

Arabidopsis Description

ABCE1ABC transporter E family member 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LID6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.