Factsheet for PGSC0003DMT400051207

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc07g008340.2.1	Tomato	cytosol, nucleus, plastid	92.56	96.89
Bra013385.1-P	Field mustard	cytosol	90.41	94.15
CDX78930	Canola	cytosol	94.05	94.05
CDY05197	Canola	cytosol	94.05	94.05
CDX76485	Canola	cytosol	93.88	93.88
CDX99388	Canola	cytosol	93.88	93.88
CDY01588	Canola	cytosol	93.88	93.88
Bra020966.1-P	Field mustard	cytosol	93.72	93.72
CDX98609	Canola	cytosol	93.72	93.72
AT4G19210.1	Thale cress	cytosol	93.22	93.22
Bra012553.1-P	Field mustard	cytosol	93.22	93.22
CDY09282	Canola	cytosol	91.57	93.11
GSMUA_Achr10P...	Banana	cytosol	93.06	93.06
GSMUA_Achr7P14480_001	Banana	cytosol	93.06	93.06
GSMUA_Achr7P14490_001	Banana	cytosol	93.06	93.06
KRH28995	Soybean	endoplasmic reticulum	92.56	92.41
EER95217	Sorghum	cytosol	92.07	92.22
Os11t0546000-01	Rice	plasma membrane	91.74	91.89
VIT_02s0087g00770.t01	Wine grape	cytosol, mitochondrion	94.88	91.84
TraesCS4A01G143000.4	Wheat	cytosol, golgi	90.08	90.23
TraesCS4B01G160000.1	Wheat	cytosol, golgi	90.08	90.23
HORVU4Hr1G038380.19	Barley	cytosol	89.92	89.92
TraesCS4D01G159400.1	Wheat	cytosol	84.79	87.69
TraesCS2D01G594500.1	Wheat	cytosol	87.27	87.42
TraesCS2B01G600300.1	Wheat	cytosol	86.78	86.92
TraesCSU01G036500.1	Wheat	cytosol	86.78	86.92
Zm00001d029044_P006	Maize	cytosol	92.56	86.29
HORVU2Hr1G123150.4	Barley	cytosol	87.11	86.25
Zm00001d047534_P007	Maize	cytosol	92.07	85.82
TraesCS1D01G220000.1	Wheat	cytosol	82.98	83.81
TraesCS1B01G231900.1	Wheat	cytosol	82.31	83.14
TraesCS1A01G218400.1	Wheat	cytosol	82.48	82.89
HORVU0Hr1G005840.5	Barley	cytosol, peroxisome	47.77	81.87
HORVU1Hr1G055810.1	Barley	mitochondrion	82.31	78.3
Os02t0282900-01	Rice	plastid	72.89	72.53
KXG30050	Sorghum	cytosol	69.59	69.47
TraesCS7B01G045400.1	Wheat	cytosol	49.75	67.95

Protein Annotations

EntrezGene:102595871	MapMan:17.6.1	Gene3D:3.40.50.300	InterPro:4Fe4S_Fe-S-bd	InterPro:4Fe4S_Fe_S_CS	InterPro:AAA+_ATPase
InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005524	GO:GO:0016787	GO:GO:0016887	InterPro:IPR003439	InterPro:IPR017896	UniProt:M1BRF5
InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF00037	PFAM:PF04068	EnsemblPlantsGene:PGSC0003DMG400019889	PGSC:PGSC0003DMG400019889
EnsemblPlants:PGSC0003DMT400051207	PRINTS:PR01868	ScanProsite:PS00198	ScanProsite:PS00211	PFscan:PS50893	PFscan:PS51379
PANTHER:PTHR19248	PANTHER:PTHR19248:SF21	InterPro:RLI1	InterPro:RLI_dom_1	InterPro:RNaseL-inhib_metal-bd_dom	SMART:SM00382
SUPFAM:SSF52540	SUPFAM:SSF54862	UniParc:UPI000294D340	RefSeq:XP_006366958.1	RefSeq:XP_006366960.1	:

Description

ABC transporter E family member 2 [Source:PGSC_GENE;Acc:PGSC0003DMG400019889]

Coordinates

chr7:+:4843628..4850372

Molecular Weight (calculated)

68101.5 Da

IEP (calculated)

8.037

GRAVY (calculated)

-0.224

Length

605 amino acids

Sequence
(BLAST)

001: MSDRLTRIAI VSADKCKPKK CRQECKKSCP VVKTGKLCIE VTVGSKIAFI SEELCIGCGI CVKKCPFEAI QIINLPKDLD KDTTHRYGPN TFKLHRLPVP
101: RPGQVLGLVG TNGIGKSTAL KVLAGKLKPN LGRFTNPPDW QEILTHFRGS ELQNYFTRIL EDNLKAIIKP QYVDHIPKAV QGNVGQVLDQ KDERDVKEKL
201: CFDLELNQVL DRNVGDLSGG ELQRFAIAVV AIQNAEIYMF DEPSSYLDVK QRLKAAQVVR SLLRPNSYVI VVEHDLSVLD YLSDFICCLY GKPGAYGVVT
301: LPFSVREGIN IFLAGFVPTE NLRFRDESLT FKVAETPQEA AEEIESYARY RYPTMTKTQG NFKLKVAEGE FTDSQIVVML GENGTGKTTF IRMLAGLLKP
401: DVVEGSDIDI PEFNVSYKPQ KISPKFQSTV RHLLHQKIRD SYQHPQFCSD VMKPLQIEQL MDQEVVNLSG GELQRVALAL CLGKPADIYL IDEPSAYLDS
501: EQRIVASKVI KRFILHAKKT AFVVEHDFIM ATYLADRVIV YEGTPSIDCN ANAPQSLLTG MNLFLSHLNI TFRRDPTNFR PRINKLESTK DREQKSAGSY
601: YYLDD

Best Arabidopsis Sequence Match ( AT4G19210.1 )
(BLAST)

001: MADRLTRIAI VSSDRCKPKK CRQECKKSCP VVKTGKLCIE VTVGSKLAFI SEELCIGCGI CVKKCPFEAI QIINLPRDLE KDTTHRYGAN TFKLHRLPVP
101: RPGQVLGLVG TNGIGKSTAL KILAGKLKPN LGRFTSPPDW QEILTHFRGS ELQNYFTRIL EDNLKAIIKP QYVDHIPRAV KGNVGEVLDQ KDERDKKAEL
201: CADLELNQVI DRDVENLSGG ELQRFAIAVV AIQNAEIYMF DEPSSYLDVK QRLKAAQVVR SLLRPNSYVI VVEHDLSVLD YLSDFICCLY GKPGAYGVVT
301: LPFSVREGIN IFLAGFVPTE NLRFRDESLT FKVAETPQES AEEIQSYARY KYPTMTKTQG NFRLRVSEGE FTDSQIIVML GENGTGKTTF IRMLAGLLKP
401: DDTEGPDREI PEFNVSYKPQ KISPKFQNSV RHLLHQKIRD SYMHPQFMSD VMKPLQIEQL MDQEVVNLSG GELQRVALTL CLGKPADIYL IDEPSAYLDS
501: EQRIVASKVI KRFILHAKKT AFVVEHDFIM ATYLADRVIV YEGQPSIDCT ANCPQSLLSG MNLFLSHLNI TFRRDPTNFR PRINKLESTK DREQKSAGSY
601: YYLDD

Arabidopsis Description

ABCE2ABC transporter E family member 2 [Source:UniProtKB/Swiss-Prot;Acc:Q8LPJ4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.