Factsheet for HORVU0Hr1G005840.5

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol

Predictor Summary:

cytosol 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome
Any Predictor:	cytosol, peroxisome
MultiLoc:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G123150.4	Barley	cytosol	91.78	53.03
TraesCS2B01G600300.1	Wheat	cytosol	90.08	52.65
TraesCS2D01G594500.1	Wheat	cytosol	90.08	52.65
TraesCSU01G036500.1	Wheat	cytosol	89.52	52.32
HORVU4Hr1G038380.19	Barley	cytosol	86.69	50.58
Solyc07g008340.2.1	Tomato	cytosol, nucleus, plastid	82.15	50.17
Bra013385.1-P	Field mustard	cytosol	81.3	49.4
GSMUA_Achr7P14480_001	Banana	cytosol	84.14	49.09
GSMUA_Achr7P14490_001	Banana	cytosol	83.85	48.93
GSMUA_Achr10P...	Banana	cytosol	82.72	48.26
PGSC0003DMT400051207	Potato	cytosol	81.87	47.77
KRH28995	Soybean	endoplasmic reticulum	81.59	47.52
CDX78930	Canola	cytosol	81.3	47.44
CDX99388	Canola	cytosol	81.3	47.44
CDY05197	Canola	cytosol	81.3	47.44
CDX76485	Canola	cytosol	80.74	47.11
CDY01588	Canola	cytosol	80.74	47.11
CDX98609	Canola	cytosol	80.45	46.94
Bra020966.1-P	Field mustard	cytosol	80.45	46.94
VIT_02s0087g00770.t01	Wine grape	cytosol, mitochondrion	83.0	46.88
Solyc08g075360.1.1	Tomato	cytosol, plastid	80.45	46.86
Bra012553.1-P	Field mustard	cytosol	80.17	46.78
AT4G19210.1	Thale cress	cytosol	80.17	46.78
CDY09282	Canola	cytosol	77.34	45.88
HORVU1Hr1G055810.1	Barley	mitochondrion	79.6	44.18

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	InterPro:4Fe4S_Fe-S-bd	InterPro:4Fe4S_Fe_S_CS	UniProt:A0A287DWI1	InterPro:AAA+_ATPase
InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005524	GO:GO:0016787	GO:GO:0016887	EnsemblPlantsGene:HORVU0Hr1G005840	EnsemblPlants:HORVU0Hr1G005840.5	InterPro:IPR003439
InterPro:IPR017896	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF00037	PRINTS:PR01868	ScanProsite:PS00198
ScanProsite:PS00211	PFscan:PS50893	PFscan:PS51379	PANTHER:PTHR19248	PANTHER:PTHR19248:SF21	InterPro:RLI1
InterPro:RLI_dom_1	SMART:SM00382	SUPFAM:SSF52540	SUPFAM:SSF54862	UniParc:UPI000B477761	:

Description

No Description!

Coordinates

chrchrUn:+:31458750..31465676

Molecular Weight (calculated)

40030.6 Da

IEP (calculated)

7.291

GRAVY (calculated)

-0.093

Length

353 amino acids

Sequence
(BLAST)

001: ASKVSFISEE LCIGCGICVK KCPFDAIEII NLPKDLEKDT THRYGPNTFK LHRYVLLDQD FSICIKFRVI FHLCNYKFCT CRLPVPRPGQ VLGLVGTNGI
101: GKSTALKVLA GKLKPNLGRF KNPPDWQEIL TYFRGSELQN YFTRLLEDNL KAIIKPQYVD HIPKAVQGNV GQVLEQKDER DMKAELCVDL ELNQVIDRNV
201: GELSGGELQR FAIAVVAVQS AEIYMFDEPS SYLDVKQRLK AAQVIRSLLR SNSYVIVVEH DLSVLDYLSD FICCLYGKPG AYGVVTLPFS VREGINIFLA
301: GFVPTENLRF RDESLTFKIV DTQDNPEEIE AYQRYKYPAM SKTLGNFKLT VME

Best Arabidopsis Sequence Match ( AT3G13640.1 )
(BLAST)

001: MSDRLTRIAI VSEDRCKPKK CRQECKKSCP VVKTGKLCIE VGSTSKSAFI SEELCIGCGI CVKKCPFEAI QIINLPKDLA KDTTHRYGAN GFKLHRLPIP
101: RPGQVLGLVG TNGIGKSTAL KILAGKLKPN LGRFNTPPDW EEILTHFRGS ELQSYFIRVV EENLKTAIKP QHVDYIKEVV RGNLGKMLEK LDERGLMEEI
201: CADMELNQVL EREARQVSGG ELQRFAIAAV FVKKADIYMF DEPSSYLDVR QRLKAAQVIR SLLRHDSYVI VVEHDLSVLD YLSDFVCCLY GKPGAYGVVT
301: LPFSVREGIN VFLAGFIPTE NLRFRDESLT FRVSETTQEN DGEVKSYARY KYPNMTKQLG DFKLEVMEGE FTDSQIIVML GENGTGKTTF IRMLAGAFPR
401: EEGVQSEIPE FNVSYKPQGN DSKRECTVRQ LLHDKIRDAC AHPQFMSDVI RPLQIEQLMD QVVKTLSGGE KQRVAITLCL GKPADIYLID EPSAHLDSEQ
501: RITASKVIKR FILHAKKTAF IVEHDFIMAT YLADRVIVYE GQPAVKCIAH SPQSLLSGMN HFLSHLNITF RRDPTNFRPR INKLESIKDK EQKTAGSYYY
601: LDD

Arabidopsis Description

ABCE1ABC transporter E family member 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LID6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.