Factsheet for GSMUA_Achr10P22260_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	plastid
EpiLoc:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P14490_001	Banana	cytosol	97.19	97.19
GSMUA_Achr7P14480_001	Banana	cytosol	97.19	97.19
EER95217	Sorghum	cytosol	93.72	93.87
Os11t0546000-01	Rice	plasma membrane	93.39	93.54
CDX76485	Canola	cytosol	93.22	93.22
Bra020966.1-P	Field mustard	cytosol	93.06	93.06
PGSC0003DMT400051207	Potato	cytosol	93.06	93.06
CDY01588	Canola	cytosol	93.06	93.06
CDX98609	Canola	cytosol	92.89	92.89
CDY09282	Canola	cytosol	91.07	92.61
Bra013385.1-P	Field mustard	cytosol	88.93	92.6
Bra012553.1-P	Field mustard	cytosol	92.4	92.4
AT4G19210.1	Thale cress	cytosol	92.4	92.4
CDX99388	Canola	cytosol	92.4	92.4
CDY05197	Canola	cytosol	92.23	92.23
CDX78930	Canola	cytosol	92.23	92.23
TraesCS4B01G160000.1	Wheat	cytosol, golgi	91.74	91.89
TraesCS4A01G143000.4	Wheat	cytosol, golgi	91.74	91.89
HORVU4Hr1G038380.19	Barley	cytosol	91.57	91.57
Solyc07g008340.2.1	Tomato	cytosol, nucleus, plastid	87.44	91.52
Solyc08g075360.1.1	Tomato	cytosol, plastid	90.25	90.1
TraesCS2D01G594500.1	Wheat	cytosol	89.26	89.4
TraesCS4D01G159400.1	Wheat	cytosol	86.28	89.23
TraesCS2B01G600300.1	Wheat	cytosol	88.93	89.07
TraesCSU01G036500.1	Wheat	cytosol	88.59	88.74
HORVU2Hr1G123150.4	Barley	cytosol	88.76	87.89
Zm00001d047534_P007	Maize	cytosol	93.72	87.37
Zm00001d029044_P006	Maize	cytosol	93.55	87.21
TraesCS1D01G220000.1	Wheat	cytosol	84.13	84.97
TraesCS1B01G231900.1	Wheat	cytosol	83.8	84.64
TraesCS1A01G218400.1	Wheat	cytosol	83.8	84.22
HORVU0Hr1G005840.5	Barley	cytosol, peroxisome	48.26	82.72
HORVU1Hr1G055810.1	Barley	mitochondrion	83.31	79.25
GSMUA_Achr5P06930_001	Banana	extracellular	17.02	78.03
Os02t0282900-01	Rice	plastid	74.21	73.85
KXG30050	Sorghum	cytosol	70.91	70.79
TraesCS7B01G045400.1	Wheat	cytosol	50.91	69.53

Protein Annotations

MapMan:17.6.1	Gene3D:3.40.50.300	InterPro:4Fe4S_Fe-S-bd	InterPro:4Fe4S_Fe_S_CS	InterPro:AAA+_ATPase	InterPro:ABC_transporter-like
InterPro:ABC_transporter_CS	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524
GO:GO:0016787	GO:GO:0016887	EnsemblPlantsGene:GSMUA_Achr10G22260_001	EnsemblPlants:GSMUA_Achr10P22260_001	EnsemblPlants:GSMUA_Achr10T22260_001	InterPro:IPR003439
InterPro:IPR017896	UniProt:M0RKF1	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF00037	PFAM:PF04068
PRINTS:PR01868	ScanProsite:PS00198	ScanProsite:PS00211	PFscan:PS50893	PFscan:PS51379	PANTHER:PTHR19248
PANTHER:PTHR19248:SF21	InterPro:RLI1	InterPro:RLI_dom_1	InterPro:RNaseL-inhib_metal-bd_dom	SMART:SM00382	SUPFAM:SSF52540
SUPFAM:SSF54862	UniParc:UPI0002953225	:	:	:	:

Description

ABC transporter E family member 2 [Source:GMGC_GENE;Acc:GSMUA_Achr10G22260_001]

Coordinates

chr10:-:27494045..27499990

Molecular Weight (calculated)

68391.0 Da

IEP (calculated)

8.145

GRAVY (calculated)

-0.234

Length

605 amino acids

Sequence
(BLAST)

001: MADRLTRIAI VSSDRCKPKK CRQECKKSCP VVKTGKLCIE VTPASKLAFI SEELCIGCGI CVKKCPFEAI QIINLPKDLD KDTTHRYGPN TFKLHRLPVP
101: RPGQVLGLVG TNGIGKSTAL KVLAGKLKPN LGRFNNPPDW QEILTYFRGS ELQNYFTRIL EDNLKAIIKP QYVDHIPKAV QGNVGQVLDQ KDEREKKAQL
201: CADLELNQVI DRNVGDLSGG ELQRFAIAVV AIQNAEIYMF DEPSSYLDVK QRLKAAQVVR SLLRPNSYVI VVEHDLSVLD YLSDFICCLY GKPGAYGVVT
301: LPFSVREGIN IFLAGFVPTE NLRFRDESLM FKVAETPQES AEEIQTYQRY RYPTMSKTQG NFKLKVIEGE FTDSQIIVML GENGTGKTTF IRMLAGLLKP
401: DTVEDSDVEM PEFNVSYKPQ KISPKFQYTV RHLLHLKIRD SYMHPQFVTD VMKPLQIEQL MDQEVVNLSG GELQRVALCL CLGKPADIYL IDEPSAYLDS
501: EQRIVASKVI KRFILHAKKT AFVVEHDFIM ATYLADKVIV YEGKPSVDCI ANAPQSLVSG MNLFLSHLDI TFRRDPTNYR PRINKLDSTK DREQKSAGSY
601: YYLDD

Best Arabidopsis Sequence Match ( AT4G19210.1 )
(BLAST)

001: MADRLTRIAI VSSDRCKPKK CRQECKKSCP VVKTGKLCIE VTVGSKLAFI SEELCIGCGI CVKKCPFEAI QIINLPRDLE KDTTHRYGAN TFKLHRLPVP
101: RPGQVLGLVG TNGIGKSTAL KILAGKLKPN LGRFTSPPDW QEILTHFRGS ELQNYFTRIL EDNLKAIIKP QYVDHIPRAV KGNVGEVLDQ KDERDKKAEL
201: CADLELNQVI DRDVENLSGG ELQRFAIAVV AIQNAEIYMF DEPSSYLDVK QRLKAAQVVR SLLRPNSYVI VVEHDLSVLD YLSDFICCLY GKPGAYGVVT
301: LPFSVREGIN IFLAGFVPTE NLRFRDESLT FKVAETPQES AEEIQSYARY KYPTMTKTQG NFRLRVSEGE FTDSQIIVML GENGTGKTTF IRMLAGLLKP
401: DDTEGPDREI PEFNVSYKPQ KISPKFQNSV RHLLHQKIRD SYMHPQFMSD VMKPLQIEQL MDQEVVNLSG GELQRVALTL CLGKPADIYL IDEPSAYLDS
501: EQRIVASKVI KRFILHAKKT AFVVEHDFIM ATYLADRVIV YEGQPSIDCT ANCPQSLLSG MNLFLSHLNI TFRRDPTNFR PRINKLESTK DREQKSAGSY
601: YYLDD

Arabidopsis Description

ABCE2ABC transporter E family member 2 [Source:UniProtKB/Swiss-Prot;Acc:Q8LPJ4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.