Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 5
- golgi 5
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr7P14480_001 | Banana | cytosol | 78.79 | 17.19 |
| GSMUA_Achr7P14490_001 | Banana | cytosol | 78.79 | 17.19 |
| GSMUA_Achr10P... | Banana | cytosol | 78.03 | 17.02 |
| VIT_02s0087g00770.t01 | Wine grape | cytosol, mitochondrion | 78.79 | 16.64 |
| KRH28995 | Soybean | endoplasmic reticulum | 75.76 | 16.5 |
Protein Annotations
| Gene3D:3.40.50.300 | MapMan:35.1 | InterPro:ABC_transporter-like | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0016787 | GO:GO:0016887 | EnsemblPlantsGene:GSMUA_Achr5G06930_001 | EnsemblPlants:GSMUA_Achr5P06930_001 |
| EnsemblPlants:GSMUA_Achr5T06930_001 | InterPro:IPR003439 | UniProt:M0SWC2 | InterPro:P-loop_NTPase | PFAM:PF00005 | PRINTS:PR01868 |
| PANTHER:PTHR19248 | PANTHER:PTHR19248:SF21 | InterPro:RLI1 | SUPFAM:SSF52540 | SUPFAM:SSF54862 | SignalP:SignalP-noTM |
| UniParc:UPI00029675A1 | SEG:seg | : | : | : | : |
Description
ABC transporter E family member 2 [Source:GMGC_GENE;Acc:GSMUA_Achr5G06930_001]
Coordinates
chr5:-:5033409..5037311
Molecular Weight (calculated)
15103.6 Da
IEP (calculated)
9.113
GRAVY (calculated)
-0.064
Length
132 amino acids
Sequence
(BLAST)
(BLAST)
001: MYIYIYILYY FIFLPLTGKL CIEVTPGSKI AFISEELCIG CHICDSDYQS FNLPKDLDKD TTYRYGPNIF KLHRLPVPRP GRVLGLVGTN GIGKSTALKV
101: LAGKLKPNLR RFNNPPDWQE ILMYIRGSEL QN
101: LAGKLKPNLR RFNNPPDWQE ILMYIRGSEL QN
001: MADRLTRIAI VSSDRCKPKK CRQECKKSCP VVKTGKLCIE VTVGSKLAFI SEELCIGCGI CVKKCPFEAI QIINLPRDLE KDTTHRYGAN TFKLHRLPVP
101: RPGQVLGLVG TNGIGKSTAL KILAGKLKPN LGRFTSPPDW QEILTHFRGS ELQNYFTRIL EDNLKAIIKP QYVDHIPRAV KGNVGEVLDQ KDERDKKAEL
201: CADLELNQVI DRDVENLSGG ELQRFAIAVV AIQNAEIYMF DEPSSYLDVK QRLKAAQVVR SLLRPNSYVI VVEHDLSVLD YLSDFICCLY GKPGAYGVVT
301: LPFSVREGIN IFLAGFVPTE NLRFRDESLT FKVAETPQES AEEIQSYARY KYPTMTKTQG NFRLRVSEGE FTDSQIIVML GENGTGKTTF IRMLAGLLKP
401: DDTEGPDREI PEFNVSYKPQ KISPKFQNSV RHLLHQKIRD SYMHPQFMSD VMKPLQIEQL MDQEVVNLSG GELQRVALTL CLGKPADIYL IDEPSAYLDS
501: EQRIVASKVI KRFILHAKKT AFVVEHDFIM ATYLADRVIV YEGQPSIDCT ANCPQSLLSG MNLFLSHLNI TFRRDPTNFR PRINKLESTK DREQKSAGSY
601: YYLDD
101: RPGQVLGLVG TNGIGKSTAL KILAGKLKPN LGRFTSPPDW QEILTHFRGS ELQNYFTRIL EDNLKAIIKP QYVDHIPRAV KGNVGEVLDQ KDERDKKAEL
201: CADLELNQVI DRDVENLSGG ELQRFAIAVV AIQNAEIYMF DEPSSYLDVK QRLKAAQVVR SLLRPNSYVI VVEHDLSVLD YLSDFICCLY GKPGAYGVVT
301: LPFSVREGIN IFLAGFVPTE NLRFRDESLT FKVAETPQES AEEIQSYARY KYPTMTKTQG NFRLRVSEGE FTDSQIIVML GENGTGKTTF IRMLAGLLKP
401: DDTEGPDREI PEFNVSYKPQ KISPKFQNSV RHLLHQKIRD SYMHPQFMSD VMKPLQIEQL MDQEVVNLSG GELQRVALTL CLGKPADIYL IDEPSAYLDS
501: EQRIVASKVI KRFILHAKKT AFVVEHDFIM ATYLADRVIV YEGQPSIDCT ANCPQSLLSG MNLFLSHLNI TFRRDPTNFR PRINKLESTK DREQKSAGSY
601: YYLDD
Arabidopsis Description
ABCE2ABC transporter E family member 2 [Source:UniProtKB/Swiss-Prot;Acc:Q8LPJ4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.