Factsheet for Os11t0546000-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 3
cytosol 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704
plasma membrane: 28056797

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 28056797 doi

N Yang, T Wang

Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER95217	Sorghum	cytosol	98.18	98.18
TraesCS4B01G160000.1	Wheat	cytosol, golgi	95.86	95.86
TraesCS4A01G143000.4	Wheat	cytosol, golgi	95.86	95.86
HORVU4Hr1G038380.19	Barley	cytosol	95.7	95.54
GSMUA_Achr7P14490_001	Banana	cytosol	94.21	94.05
GSMUA_Achr10P...	Banana	cytosol	93.54	93.39
GSMUA_Achr7P14480_001	Banana	cytosol	93.54	93.39
TraesCS4D01G159400.1	Wheat	cytosol	90.07	92.99
PGSC0003DMT400051207	Potato	cytosol	91.89	91.74
CDX76485	Canola	cytosol	91.39	91.24
CDY01588	Canola	cytosol	91.39	91.24
KRH28995	Soybean	endoplasmic reticulum	91.39	91.09
Bra020966.1-P	Field mustard	cytosol	91.23	91.07
CDX98609	Canola	cytosol	91.23	91.07
Zm00001d047534_P007	Maize	cytosol	97.85	91.06
Zm00001d029044_P006	Maize	cytosol	97.85	91.06
Bra013385.1-P	Field mustard	cytosol	87.42	90.88
CDY09282	Canola	cytosol	89.4	90.76
CDY05197	Canola	cytosol	90.89	90.74
CDX99388	Canola	cytosol	90.89	90.74
CDX78930	Canola	cytosol	90.89	90.74
AT4G19210.1	Thale cress	cytosol	90.89	90.74
Bra012553.1-P	Field mustard	cytosol	90.73	90.58
Solyc07g008340.2.1	Tomato	cytosol, nucleus, plastid	86.09	89.97
VIT_02s0087g00770.t01	Wine grape	cytosol, mitochondrion	92.72	89.6
Solyc08g075360.1.1	Tomato	cytosol, plastid	88.58	88.28
Os02t0282900-01	Rice	plastid	72.52	72.04

Protein Annotations

MapMan:17.6.1	Gene3D:3.40.50.300	EntrezGene:4350692	InterPro:4Fe4S_Fe-S-bd	InterPro:4Fe4S_Fe_S_CS	UniProt:A0A0P0Y344
InterPro:AAA+_ATPase	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	ProteinID:BAT14379.1	GO:GO:0000054	GO:GO:0000166
GO:GO:0003674	GO:GO:0003676	GO:GO:0003824	GO:GO:0005488	GO:GO:0005506	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005852	GO:GO:0006139
GO:GO:0006259	GO:GO:0006412	GO:GO:0006413	GO:GO:0006415	GO:GO:0006810	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0015074	GO:GO:0016043	GO:GO:0016787
GO:GO:0016887	GO:GO:0019538	GO:GO:0043024	InterPro:IPR003439	InterPro:IPR017896	EnsemblPlantsGene:Os11g0546000
EnsemblPlants:Os11t0546000-01	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF00037	PFAM:PF04068	PRINTS:PR01868
ScanProsite:PS00198	ScanProsite:PS00211	PFscan:PS50893	PFscan:PS51379	PANTHER:PTHR19248	PANTHER:PTHR19248:SF21
InterPro:RLI1	InterPro:RLI_dom_1	InterPro:RNaseL-inhib_metal-bd_dom	SMART:SM00382	SUPFAM:SSF52540	SUPFAM:SSF54862
UniParc:UPI000393C3D3	RefSeq:XP_015617612.1	:	:	:	:

Description

ABC TRANSPORTER E FAMILY MEMBER 2Similar to RNase L inhibitor-like protein. (Os11t0546000-01);Similar to RNase L inhibitor-like protein. (Os11t0546000-02)

Coordinates

chr11:+:20129027..20134231

Molecular Weight (calculated)

68106.5 Da

IEP (calculated)

7.907

GRAVY (calculated)

-0.235

Length

604 amino acids

Sequence
(BLAST)

001: MAERLTRIAI VSEDKCKPKK CRQECKKSCP VVKTGKLCIE VTPASKLAFI SEELCIGCGI CVKKCPFDAI EIINLPKDLE KDTTHRYGPN TFKLHRLPVP
101: RPGQVLGLVG TNGIGKSTAL KVLAGKLKPN LGRFKNPPDW QEILTYFRGS ELQNYFTRIL EDNLKAIIKP QYVDHIPKAV QGNVGQVLDQ KDERGVKAEL
201: CVDLELNQVI DRNVGDLSGG ELQRFAIAVV AVQNAEIFMF DEPSSYLDVK QRLKAAQVVR SLLRPNSYVI VVEHDLSVLD YLSDFICCLY GKPGAYGVVT
301: LPFSVREGIN IFLAGFVPTE NLRFRDESLT FKIAETQESA EEIETYQRYK YPTMSKTQGN FKLTVVEGEF TDSQIVVMLG ENGTGKTTFI RMLAGLLKPD
401: TVEGTEIEIP EFNVSYKPQK ISPKFQHSVR HLLHQKIRDS YTHPQFVSDV MKPLQIEQLM DQEVINLSGG ELQRVAICLC LGKPADIYLI DEPSAYLDSE
501: QRIVASKVIK RFILHAKKTA FIVEHDFIMA TYLADKVIVY EGRPSIDCTA NAPQSLVSGM NKFLSHLDIT FRRDPTNYRP RINKLDSTKD REQKSAGSYY
601: YLDD

Best Arabidopsis Sequence Match ( AT4G19210.1 )
(BLAST)

001: MADRLTRIAI VSSDRCKPKK CRQECKKSCP VVKTGKLCIE VTVGSKLAFI SEELCIGCGI CVKKCPFEAI QIINLPRDLE KDTTHRYGAN TFKLHRLPVP
101: RPGQVLGLVG TNGIGKSTAL KILAGKLKPN LGRFTSPPDW QEILTHFRGS ELQNYFTRIL EDNLKAIIKP QYVDHIPRAV KGNVGEVLDQ KDERDKKAEL
201: CADLELNQVI DRDVENLSGG ELQRFAIAVV AIQNAEIYMF DEPSSYLDVK QRLKAAQVVR SLLRPNSYVI VVEHDLSVLD YLSDFICCLY GKPGAYGVVT
301: LPFSVREGIN IFLAGFVPTE NLRFRDESLT FKVAETPQES AEEIQSYARY KYPTMTKTQG NFRLRVSEGE FTDSQIIVML GENGTGKTTF IRMLAGLLKP
401: DDTEGPDREI PEFNVSYKPQ KISPKFQNSV RHLLHQKIRD SYMHPQFMSD VMKPLQIEQL MDQEVVNLSG GELQRVALTL CLGKPADIYL IDEPSAYLDS
501: EQRIVASKVI KRFILHAKKT AFVVEHDFIM ATYLADRVIV YEGQPSIDCT ANCPQSLLSG MNLFLSHLNI TFRRDPTNFR PRINKLESTK DREQKSAGSY
601: YYLDD

Arabidopsis Description

ABCE2ABC transporter E family member 2 [Source:UniProtKB/Swiss-Prot;Acc:Q8LPJ4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.