Factsheet for TraesCS4D01G159400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G160000.1	Wheat	cytosol, golgi	96.92	93.87
HORVU4Hr1G038380.19	Barley	cytosol	96.75	93.55
TraesCS4A01G143000.4	Wheat	cytosol, golgi	96.58	93.54
Os11t0546000-01	Rice	plasma membrane	92.99	90.07
EER95217	Sorghum	cytosol	92.99	90.07
Solyc07g008340.2.1	Tomato	cytosol, nucleus, plastid	87.35	88.41
GSMUA_Achr7P14490_001	Banana	cytosol	90.26	87.27
GSMUA_Achr7P14480_001	Banana	cytosol	89.74	86.78
TraesCS2D01G594500.1	Wheat	cytosol	89.57	86.75
GSMUA_Achr10P...	Banana	cytosol	89.23	86.28
KRH28995	Soybean	endoplasmic reticulum	88.03	84.98
PGSC0003DMT400051207	Potato	cytosol	87.69	84.79
CDY01588	Canola	cytosol	87.18	84.3
CDX76485	Canola	cytosol	87.18	84.3
CDX98609	Canola	cytosol	87.01	84.13
Bra020966.1-P	Field mustard	cytosol	87.01	84.13
Zm00001d029044_P006	Maize	cytosol	92.99	83.82
CDY05197	Canola	cytosol	86.67	83.8
CDX99388	Canola	cytosol	86.67	83.8
CDX78930	Canola	cytosol	86.67	83.8
AT4G19210.1	Thale cress	cytosol	86.67	83.8
CDY09282	Canola	cytosol	85.13	83.7
Bra013385.1-P	Field mustard	cytosol	83.08	83.65
Bra012553.1-P	Field mustard	cytosol	86.5	83.64
Zm00001d047534_P007	Maize	cytosol	92.65	83.51
VIT_02s0087g00770.t01	Wine grape	cytosol, mitochondrion	88.89	83.2
Solyc08g075360.1.1	Tomato	cytosol, plastid	84.96	82.01
TraesCS1D01G220000.1	Wheat	cytosol	81.54	79.63

Protein Annotations

MapMan:17.6.1	Gene3D:3.40.50.300	InterPro:4Fe4S_Fe-S-bd	InterPro:4Fe4S_Fe_S_CS	InterPro:AAA+_ATPase	InterPro:ABC_transporter-like
InterPro:ABC_transporter_CS	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524
GO:GO:0016787	GO:GO:0016887	InterPro:IPR003439	InterPro:IPR017896	InterPro:P-loop_NTPase	PFAM:PF00005
PFAM:PF00037	PFAM:PF04068	PRINTS:PR01868	ScanProsite:PS00198	ScanProsite:PS00211	PFscan:PS50893
PFscan:PS51379	PANTHER:PTHR19248	PANTHER:PTHR19248:SF21	InterPro:RLI1	InterPro:RLI_dom_1	InterPro:RNaseL-inhib_metal-bd_dom
SMART:SM00382	SUPFAM:SSF52540	SUPFAM:SSF54862	EnsemblPlantsGene:TraesCS4D01G159400	EnsemblPlants:TraesCS4D01G159400.1	TIGR:cd03236

Description

No Description!

Coordinates

chr4D:+:226558460..226565429

Molecular Weight (calculated)

65666.1 Da

IEP (calculated)

7.905

GRAVY (calculated)

-0.120

Length

585 amino acids

Sequence
(BLAST)

001: MADRLTRIAI VSEDKCKPKK CRQECKKSCP VVKTGKLCIE VSPAAKLAFI SEELCIGCGI CVKKCPFDAI EIINLPKDLE KDTTHRYGPN TFKLHRLPVP
101: RPGQVLGLVG TNGIGKSTAL KVLAGKLKPN LGRFKNPPDW QEILTYFRGS ELQNYFTRIL EDNLKAIIKP QYVDHIPKAV QGNVGQVLEQ KDERDMKNEL
201: CVDLELNQVI DRNVGDLSGG ELQRFAIAVV AVQSAEIYMF DEPSSYLDVK QRLKAARVIR SLLRSNSYVI VVEHDLSVLD YLSDFICCLY GKPGAYGVVT
301: LPFSVREGIN IFLAGFVPTE NLRFRDESLT FKIAETQENA EEVATYQRYK YPTMSKTQGN FKLSVVEGEF TDSQIVVMLG ENGTGKTTFI RMLAGLLKPD
401: TMEGSEVEIP EFNVSYKPQK ISPKFQHPVR HLLHSKIRDS YTHPQFVSDV MKPLQIEQLM DQEVINLSGG ELQRVALCLC LGKPADIYLI DEPSAYLDSE
501: QRIVASKVIK RFILHAKKTA FIVEHDFIMA TYLADKVIVY EGLASIDCTA NAPQSLVSGM NKFLSEQQII QPIGKMLVIL KVFQN

Best Arabidopsis Sequence Match ( AT4G30300.1 )
(BLAST)

001: MTITRGDFKL RLNQGEFTDS QIIVMLGENG TGKTTFIKML AGSKLDIDEE GSQVHEIPQF SVSYKNQHMS NRKFEITVRD LIHRKIPNAY AEHQFVSDVM
101: KPLKIEELMD KSFNKLSGGE KQRVALALCL GKSADIYLID EPSAFLDSEQ RIIASKVIKR FILQMKKAAF ARFHNGYVFG R

Arabidopsis Description

ABCE3NAP15 [Source:UniProtKB/TrEMBL;Acc:A0A178V187]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.