Factsheet for Bra020966.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
nucleus 2
cytosol 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX76485	Canola	cytosol	99.83	99.83
CDY09282	Canola	cytosol	97.52	99.16
Bra012553.1-P	Field mustard	cytosol	98.68	98.68
AT4G19210.1	Thale cress	cytosol	97.52	97.52
Bra013385.1-P	Field mustard	cytosol	93.39	97.25
PGSC0003DMT400051207	Potato	cytosol	93.72	93.72
GSMUA_Achr10P...	Banana	cytosol	93.06	93.06
GSMUA_Achr7P14490_001	Banana	cytosol	92.89	92.89
GSMUA_Achr7P14480_001	Banana	cytosol	92.56	92.56
KRH28995	Soybean	endoplasmic reticulum	92.23	92.08
EER95217	Sorghum	cytosol	91.57	91.72
Solyc07g008340.2.1	Tomato	cytosol, nucleus, plastid	87.27	91.35
Os11t0546000-01	Rice	plasma membrane	91.07	91.23
VIT_02s0087g00770.t01	Wine grape	cytosol, mitochondrion	93.55	90.56
Solyc08g075360.1.1	Tomato	cytosol, plastid	90.25	90.1
TraesCS4A01G143000.4	Wheat	cytosol, golgi	89.59	89.74
TraesCS4B01G160000.1	Wheat	cytosol, golgi	89.42	89.57
HORVU4Hr1G038380.19	Barley	cytosol	89.26	89.26
TraesCS2B01G600300.1	Wheat	cytosol	86.94	87.09
TraesCS4D01G159400.1	Wheat	cytosol	84.13	87.01
TraesCS2D01G594500.1	Wheat	cytosol	86.78	86.92
TraesCSU01G036500.1	Wheat	cytosol	86.45	86.59
HORVU2Hr1G123150.4	Barley	cytosol	86.78	85.92
Zm00001d029044_P006	Maize	cytosol	91.74	85.52
Zm00001d047534_P007	Maize	cytosol	91.57	85.36
TraesCS1D01G220000.1	Wheat	cytosol	80.99	81.8
TraesCS1B01G231900.1	Wheat	cytosol	80.66	81.47
Bra021494.1-P	Field mustard	cytosol	80.99	81.26
TraesCS1A01G218400.1	Wheat	cytosol	80.5	80.9
HORVU0Hr1G005840.5	Barley	cytosol, peroxisome	46.94	80.45
Bra001515.1-P	Field mustard	cytosol	76.86	77.11
HORVU1Hr1G055810.1	Barley	mitochondrion	80.0	76.1
Os02t0282900-01	Rice	plastid	71.9	71.55
KXG30050	Sorghum	cytosol	68.43	68.32
TraesCS7B01G045400.1	Wheat	cytosol	49.92	68.17
Bra017243.1-P	Field mustard	cytosol	31.74	25.36

Protein Annotations

MapMan:17.6.1	Gene3D:3.40.50.300	InterPro:4Fe4S_Fe-S-bd	InterPro:4Fe4S_Fe_S_CS	InterPro:AAA+_ATPase	ProteinID:AAO32059
ProteinID:AAO32059.1	EMBL:AB302979	EMBL:AB302980	EMBL:AB302981	EMBL:AB302982	InterPro:ABC_transporter-like
InterPro:ABC_transporter_CS	EMBL:AY185357	ProteinID:BAF92781	ProteinID:BAF92781.1	ProteinID:BAF92782	ProteinID:BAF92782.1
ProteinID:BAF92783	ProteinID:BAF92783.1	ProteinID:BAF92784	ProteinID:BAF92784.1	EnsemblPlantsGene:Bra020966	EnsemblPlants:Bra020966.1
EnsemblPlants:Bra020966.1-P	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524
GO:GO:0016787	GO:GO:0016887	InterPro:IPR003439	InterPro:IPR017896	UniProt:M4DWS0	InterPro:P-loop_NTPase
PFAM:PF00005	PFAM:PF00037	PFAM:PF04068	PRINTS:PR01868	ScanProsite:PS00198	ScanProsite:PS00211
PFscan:PS50893	PFscan:PS51379	PANTHER:PTHR19248	PANTHER:PTHR19248:SF21	InterPro:RLI1	InterPro:RLI_dom_1
InterPro:RNaseL-inhib_metal-bd_dom	SMART:SM00382	SUPFAM:SSF52540	SUPFAM:SSF54862	UniParc:UPI0002545679	:

Description

AT4G19210 (E=0.0) ATRLI2, RLI2 | ATRLI2; transporter

Coordinates

chrA08:+:10893369..10896111

Molecular Weight (calculated)

68389.8 Da

IEP (calculated)

7.762

GRAVY (calculated)

-0.253

Length

605 amino acids

Sequence
(BLAST)

001: MADRLTRIAI VSSDRCKPKK CRQECKKSCP VVKTGKLCIE VTVGSKLAFI SEELCIGCGI CVKKCPFEAI QIINLPRDLE KDTTHRYGAN TFKLHRLPVP
101: RPGQVLGLVG TNGIGKSTAL KILAGKLKPN LGRFTNPPDW QEILTHFRGS ELQNYFTRIL EDNLKAIIKP QYVDHIPKAV RGNVGEVLDQ KDERDKKAEL
201: CADLELNQVI DRAVENLSGG ELQRFAIAVV AIQNAEIYMF DEPSSYLDVK QRLKAAQVVR SLLRPNSYVI VEEHDLSVLD YLSDFICCLY GKPGAYGVVT
301: LPFSVREGIN IFLAGFVPTE NLRFRDESLT FKVAETPQES AEEIQSYARY KYPTMTKTQG NFRLKVTEGE FTDSQIIVML GENGTGKTTF IRMLAGLLKP
401: DETEESDIEI PEFNVSYKPQ KISPKFQNSV RHLLHQKIRD SYMHPQFVSD VMKPLQIEQL MDQEVVNLSG GELQRVALAL CLGKPADIYL IDEPSAYLDS
501: EQRIVASKVI KRFILHAKKT AFIVEHDFIM ATYLADRVIV YEGQPSIDCI ANCPQSLLSG MNLFLSHLNI TFRRDPTNFR PRINKLESTK DREQKSAGSY
601: YYLDD

Best Arabidopsis Sequence Match ( AT4G19210.1 )
(BLAST)

001: MADRLTRIAI VSSDRCKPKK CRQECKKSCP VVKTGKLCIE VTVGSKLAFI SEELCIGCGI CVKKCPFEAI QIINLPRDLE KDTTHRYGAN TFKLHRLPVP
101: RPGQVLGLVG TNGIGKSTAL KILAGKLKPN LGRFTSPPDW QEILTHFRGS ELQNYFTRIL EDNLKAIIKP QYVDHIPRAV KGNVGEVLDQ KDERDKKAEL
201: CADLELNQVI DRDVENLSGG ELQRFAIAVV AIQNAEIYMF DEPSSYLDVK QRLKAAQVVR SLLRPNSYVI VVEHDLSVLD YLSDFICCLY GKPGAYGVVT
301: LPFSVREGIN IFLAGFVPTE NLRFRDESLT FKVAETPQES AEEIQSYARY KYPTMTKTQG NFRLRVSEGE FTDSQIIVML GENGTGKTTF IRMLAGLLKP
401: DDTEGPDREI PEFNVSYKPQ KISPKFQNSV RHLLHQKIRD SYMHPQFMSD VMKPLQIEQL MDQEVVNLSG GELQRVALTL CLGKPADIYL IDEPSAYLDS
501: EQRIVASKVI KRFILHAKKT AFVVEHDFIM ATYLADRVIV YEGQPSIDCT ANCPQSLLSG MNLFLSHLNI TFRRDPTNFR PRINKLESTK DREQKSAGSY
601: YYLDD

Arabidopsis Description

ABCE2ABC transporter E family member 2 [Source:UniProtKB/Swiss-Prot;Acc:Q8LPJ4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.