Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 4
- plasma membrane 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY43728 | Canola | cytosol | 60.77 | 61.33 |
| Bra013385.1-P | Field mustard | cytosol | 25.5 | 33.22 |
| Bra001515.1-P | Field mustard | cytosol | 26.42 | 33.17 |
| Bra020966.1-P | Field mustard | cytosol | 25.36 | 31.74 |
| Bra012553.1-P | Field mustard | cytosol | 25.1 | 31.41 |
| Bra021494.1-P | Field mustard | cytosol | 24.97 | 31.34 |
Protein Annotations
| Gene3D:3.40.50.300 | MapMan:35.1 | InterPro:AAA+_ATPase | InterPro:ABC_transporter-like | EnsemblPlantsGene:Bra017243 | EnsemblPlants:Bra017243.1 |
| EnsemblPlants:Bra017243.1-P | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005524 |
| GO:GO:0016787 | GO:GO:0016887 | InterPro:IPR003439 | UniProt:M4DL62 | InterPro:P-loop_NTPase | PFAM:PF00005 |
| PRINTS:PR01868 | PFscan:PS50893 | PANTHER:PTHR19248 | InterPro:RLI1 | SMART:SM00382 | SUPFAM:SSF52540 |
| UniParc:UPI0002544067 | SEG:seg | : | : | : | : |
Description
AT3G13640 (E=6e-045) ATRLI1 | ATRLI1; transporter
Coordinates
chrA04:+:15777143..15784078
Molecular Weight (calculated)
84087.3 Da
IEP (calculated)
6.398
GRAVY (calculated)
-0.209
Length
757 amino acids
Sequence
(BLAST)
(BLAST)
001: MFSCPCLQDV GANFGNCFKL KREARELIIR SCRFAVLPGE QIPMYFLWQA TGSSLSLSTK WSGADDPMPL MGCVLVVNKV DGSPEKHRSD SLTTGKTGQL
101: IEVYHKCGSM SRGQLQHGAD GIVLEMPSAL MLLDGSPEKH RSDSLTTGKT GQLIEVYHKC GSMSRGQLQH GADGIVLEMP SALMLLDGSP EKHRSDSLTT
201: GKTGQLIEVY HKCGSMSRGQ LQHGADVTGE IERIPPIKTV FVPTDEVLEV VYVEKHRWLM GGGDLLPEFV DAVFSTRGLD TQKLYGAKEA RQPTNVANDV
301: PLDIPTHRYG PGSFDIHGLP NLYLGTVVGL LGGKSTGKTT CLKILAGQLK PNLGRFEDPP EWDEIIDHFD TEHIRTYLTR LQTNTLNVAL KSQDLTVYRS
401: SLTVRTSLEE SKGTGFDSME ELIEDLDMTS MLDTCVTDLS DAELQRFAIA STIVQMADVY LFDEPTIFLD ARQKYQVARV ILSVVKPDSE EIVTPPTYRY
501: PETVVKGGTF SLHVMGGDLR SSEITVVLGN THTGKTLFLE WLNRISVGQD FSHKDQKMIK CEKRHDTVAT HLYRLIRFSL VDRVFQELVL KPLGIAKILD
601: KRIKEVSQST LQKIAIATCL GQEGARVFLL DEPSIHLDAR ERVIAAQTIK RFIAYSRTAA LVVEQDFMMA TYLADRVIVV QGEPGVQSTV NSPVLMANGV
701: NQYLSDLNIT CRTDRFTSLA RMNKPRSVED EEQKTRGHFF EDLGRPVKNL GRVEDLV
101: IEVYHKCGSM SRGQLQHGAD GIVLEMPSAL MLLDGSPEKH RSDSLTTGKT GQLIEVYHKC GSMSRGQLQH GADGIVLEMP SALMLLDGSP EKHRSDSLTT
201: GKTGQLIEVY HKCGSMSRGQ LQHGADVTGE IERIPPIKTV FVPTDEVLEV VYVEKHRWLM GGGDLLPEFV DAVFSTRGLD TQKLYGAKEA RQPTNVANDV
301: PLDIPTHRYG PGSFDIHGLP NLYLGTVVGL LGGKSTGKTT CLKILAGQLK PNLGRFEDPP EWDEIIDHFD TEHIRTYLTR LQTNTLNVAL KSQDLTVYRS
401: SLTVRTSLEE SKGTGFDSME ELIEDLDMTS MLDTCVTDLS DAELQRFAIA STIVQMADVY LFDEPTIFLD ARQKYQVARV ILSVVKPDSE EIVTPPTYRY
501: PETVVKGGTF SLHVMGGDLR SSEITVVLGN THTGKTLFLE WLNRISVGQD FSHKDQKMIK CEKRHDTVAT HLYRLIRFSL VDRVFQELVL KPLGIAKILD
601: KRIKEVSQST LQKIAIATCL GQEGARVFLL DEPSIHLDAR ERVIAAQTIK RFIAYSRTAA LVVEQDFMMA TYLADRVIVV QGEPGVQSTV NSPVLMANGV
701: NQYLSDLNIT CRTDRFTSLA RMNKPRSVED EEQKTRGHFF EDLGRPVKNL GRVEDLV
001: MSDRLTRIAI VSEDRCKPKK CRQECKKSCP VVKTGKLCIE VGSTSKSAFI SEELCIGCGI CVKKCPFEAI QIINLPKDLA KDTTHRYGAN GFKLHRLPIP
101: RPGQVLGLVG TNGIGKSTAL KILAGKLKPN LGRFNTPPDW EEILTHFRGS ELQSYFIRVV EENLKTAIKP QHVDYIKEVV RGNLGKMLEK LDERGLMEEI
201: CADMELNQVL EREARQVSGG ELQRFAIAAV FVKKADIYMF DEPSSYLDVR QRLKAAQVIR SLLRHDSYVI VVEHDLSVLD YLSDFVCCLY GKPGAYGVVT
301: LPFSVREGIN VFLAGFIPTE NLRFRDESLT FRVSETTQEN DGEVKSYARY KYPNMTKQLG DFKLEVMEGE FTDSQIIVML GENGTGKTTF IRMLAGAFPR
401: EEGVQSEIPE FNVSYKPQGN DSKRECTVRQ LLHDKIRDAC AHPQFMSDVI RPLQIEQLMD QVVKTLSGGE KQRVAITLCL GKPADIYLID EPSAHLDSEQ
501: RITASKVIKR FILHAKKTAF IVEHDFIMAT YLADRVIVYE GQPAVKCIAH SPQSLLSGMN HFLSHLNITF RRDPTNFRPR INKLESIKDK EQKTAGSYYY
601: LDD
101: RPGQVLGLVG TNGIGKSTAL KILAGKLKPN LGRFNTPPDW EEILTHFRGS ELQSYFIRVV EENLKTAIKP QHVDYIKEVV RGNLGKMLEK LDERGLMEEI
201: CADMELNQVL EREARQVSGG ELQRFAIAAV FVKKADIYMF DEPSSYLDVR QRLKAAQVIR SLLRHDSYVI VVEHDLSVLD YLSDFVCCLY GKPGAYGVVT
301: LPFSVREGIN VFLAGFIPTE NLRFRDESLT FRVSETTQEN DGEVKSYARY KYPNMTKQLG DFKLEVMEGE FTDSQIIVML GENGTGKTTF IRMLAGAFPR
401: EEGVQSEIPE FNVSYKPQGN DSKRECTVRQ LLHDKIRDAC AHPQFMSDVI RPLQIEQLMD QVVKTLSGGE KQRVAITLCL GKPADIYLID EPSAHLDSEQ
501: RITASKVIKR FILHAKKTAF IVEHDFIMAT YLADRVIVYE GQPAVKCIAH SPQSLLSGMN HFLSHLNITF RRDPTNFRPR INKLESIKDK EQKTAGSYYY
601: LDD
Arabidopsis Description
ABCE1ABC transporter E family member 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LID6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.