Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra017243.1-P | Field mustard | cytosol | 61.33 | 60.77 |
| CDY40521 | Canola | cytosol | 2.53 | 36.54 |
| CDX82529 | Canola | cytosol | 25.47 | 34.35 |
| CDX75723 | Canola | cytosol | 26.53 | 33.0 |
| CDX78930 | Canola | cytosol | 26.0 | 32.23 |
| CDX99388 | Canola | cytosol | 26.0 | 32.23 |
| CDY05197 | Canola | cytosol | 26.0 | 32.23 |
| CDY09282 | Canola | cytosol | 25.2 | 31.76 |
| CDX76485 | Canola | cytosol | 25.6 | 31.74 |
| CDX98609 | Canola | cytosol | 25.6 | 31.74 |
| CDY01588 | Canola | cytosol | 25.6 | 31.74 |
| CDY60809 | Canola | cytosol | 24.93 | 31.01 |
| CDY23627 | Canola | cytosol | 4.27 | 29.09 |
| CDY63778 | Canola | cytosol | 18.27 | 28.36 |
| CDX97503 | Canola | cytosol, extracellular | 3.87 | 25.22 |
| CDX71236 | Canola | cytosol | 6.8 | 19.1 |
| CDY53120 | Canola | nucleus | 8.53 | 13.03 |
| CDY40520 | Canola | cytosol | 5.73 | 9.64 |
Protein Annotations
| Gene3D:3.40.50.300 | MapMan:35.1 | GO:A0A078I3N3 | UniProt:A0A078I3N3 | InterPro:AAA+_ATPase | InterPro:ABC_transporter-like |
| EnsemblPlants:CDY43728 | ProteinID:CDY43728 | ProteinID:CDY43728.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0016787 | GO:GO:0016887 | EnsemblPlantsGene:GSBRNA2T00077217001 | InterPro:IPR003439 |
| InterPro:P-loop_NTPase | PFAM:PF00005 | PRINTS:PR01868 | PFscan:PS50893 | PANTHER:PTHR19248 | InterPro:RLI1 |
| SMART:SM00382 | SUPFAM:SSF52540 | UniParc:UPI0004EEDD96 | SEG:seg | : | : |
Description
BnaAnng07430DBnaAnng07430D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I3N3]
Coordinates
chrLK032567:+:95350..99941
Molecular Weight (calculated)
84073.8 Da
IEP (calculated)
6.079
GRAVY (calculated)
-0.324
Length
750 amino acids
Sequence
(BLAST)
(BLAST)
001: MQPEGGKSKM SHPGNTPKAF TGEDGSPEKH RSDSLTTGKT GQLVEVYHKC GSVSRGQLQH GADGIVLEMP SALMLLAIGE FERIPPTKTI IVPADEISKV
101: EYVEKHRWRR GEEEDWLLSA LSSAYNHMNL IAHDDGSPEK HRSDSLTTGK TGQLIEVYHK CGSMSRGQLQ HGADGIVLEM PFAYLKRVTG EIERIPPIKT
201: VFVPTDEVLE VVYVEKHRWL MGGGDLLPEF VDAVFSTRGL DTQKLYGAKI IPSVQDYVPR DLGNLEIERM TREARQPTNV ANDVPLDIPT HRYGPGSFDI
301: HGLPNLYLGT VVGLLGGKST GKTTCLKILA GQLKPNLGRF EDPPEWDEII DHFDTEHIRT YLTRLQTNTL NVALKSQDLT VYRSSLTVRT SLEESKGTGF
401: DSMEELIEDL DMTSMLDTYA RQKYQVARVI LSVVKPDRYV CITDNDMSVL DLVCDHILYT GEETTSGEVH LEHYPLTLEE LSEEIVTPPT YRYPETVVKG
501: GTFSLHVMGG DLRSSEITVV LGNTHTGKTL FLEWLNRISV GQDFSHKDQK MIKCEKRHDT VATHLYRLIR FSLVDRVFQE LVLKPLGIAK ILDKRIKEVS
601: QSTLQKIAIA TCLGQEGARI FLLDEPSIHL DARERVIAAQ TIKRFIAYSR TAALVVEQDF MMATYLADRV IVVQGEPGVQ STVNSPVLMA NGVNQYLSDL
701: NITCRTDRFT SLARMNKPRS VEDEEQKTRG HFFEDLGRPV KNLGRVEDLV
101: EYVEKHRWRR GEEEDWLLSA LSSAYNHMNL IAHDDGSPEK HRSDSLTTGK TGQLIEVYHK CGSMSRGQLQ HGADGIVLEM PFAYLKRVTG EIERIPPIKT
201: VFVPTDEVLE VVYVEKHRWL MGGGDLLPEF VDAVFSTRGL DTQKLYGAKI IPSVQDYVPR DLGNLEIERM TREARQPTNV ANDVPLDIPT HRYGPGSFDI
301: HGLPNLYLGT VVGLLGGKST GKTTCLKILA GQLKPNLGRF EDPPEWDEII DHFDTEHIRT YLTRLQTNTL NVALKSQDLT VYRSSLTVRT SLEESKGTGF
401: DSMEELIEDL DMTSMLDTYA RQKYQVARVI LSVVKPDRYV CITDNDMSVL DLVCDHILYT GEETTSGEVH LEHYPLTLEE LSEEIVTPPT YRYPETVVKG
501: GTFSLHVMGG DLRSSEITVV LGNTHTGKTL FLEWLNRISV GQDFSHKDQK MIKCEKRHDT VATHLYRLIR FSLVDRVFQE LVLKPLGIAK ILDKRIKEVS
601: QSTLQKIAIA TCLGQEGARI FLLDEPSIHL DARERVIAAQ TIKRFIAYSR TAALVVEQDF MMATYLADRV IVVQGEPGVQ STVNSPVLMA NGVNQYLSDL
701: NITCRTDRFT SLARMNKPRS VEDEEQKTRG HFFEDLGRPV KNLGRVEDLV
001: MSDRLTRIAI VSEDRCKPKK CRQECKKSCP VVKTGKLCIE VGSTSKSAFI SEELCIGCGI CVKKCPFEAI QIINLPKDLA KDTTHRYGAN GFKLHRLPIP
101: RPGQVLGLVG TNGIGKSTAL KILAGKLKPN LGRFNTPPDW EEILTHFRGS ELQSYFIRVV EENLKTAIKP QHVDYIKEVV RGNLGKMLEK LDERGLMEEI
201: CADMELNQVL EREARQVSGG ELQRFAIAAV FVKKADIYMF DEPSSYLDVR QRLKAAQVIR SLLRHDSYVI VVEHDLSVLD YLSDFVCCLY GKPGAYGVVT
301: LPFSVREGIN VFLAGFIPTE NLRFRDESLT FRVSETTQEN DGEVKSYARY KYPNMTKQLG DFKLEVMEGE FTDSQIIVML GENGTGKTTF IRMLAGAFPR
401: EEGVQSEIPE FNVSYKPQGN DSKRECTVRQ LLHDKIRDAC AHPQFMSDVI RPLQIEQLMD QVVKTLSGGE KQRVAITLCL GKPADIYLID EPSAHLDSEQ
501: RITASKVIKR FILHAKKTAF IVEHDFIMAT YLADRVIVYE GQPAVKCIAH SPQSLLSGMN HFLSHLNITF RRDPTNFRPR INKLESIKDK EQKTAGSYYY
601: LDD
101: RPGQVLGLVG TNGIGKSTAL KILAGKLKPN LGRFNTPPDW EEILTHFRGS ELQSYFIRVV EENLKTAIKP QHVDYIKEVV RGNLGKMLEK LDERGLMEEI
201: CADMELNQVL EREARQVSGG ELQRFAIAAV FVKKADIYMF DEPSSYLDVR QRLKAAQVIR SLLRHDSYVI VVEHDLSVLD YLSDFVCCLY GKPGAYGVVT
301: LPFSVREGIN VFLAGFIPTE NLRFRDESLT FRVSETTQEN DGEVKSYARY KYPNMTKQLG DFKLEVMEGE FTDSQIIVML GENGTGKTTF IRMLAGAFPR
401: EEGVQSEIPE FNVSYKPQGN DSKRECTVRQ LLHDKIRDAC AHPQFMSDVI RPLQIEQLMD QVVKTLSGGE KQRVAITLCL GKPADIYLID EPSAHLDSEQ
501: RITASKVIKR FILHAKKTAF IVEHDFIMAT YLADRVIVYE GQPAVKCIAH SPQSLLSGMN HFLSHLNITF RRDPTNFRPR INKLESIKDK EQKTAGSYYY
601: LDD
Arabidopsis Description
ABCE1ABC transporter E family member 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LID6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.