Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra021494.1-P | Field mustard | cytosol | 99.67 | 99.67 |
| CDX75723 | Canola | cytosol | 83.91 | 83.91 |
| CDX82529 | Canola | cytosol | 76.12 | 82.55 |
| CDX78930 | Canola | cytosol | 81.76 | 81.49 |
| CDX99388 | Canola | cytosol | 81.76 | 81.49 |
| CDY05197 | Canola | cytosol | 81.76 | 81.49 |
| CDX76485 | Canola | cytosol | 81.43 | 81.16 |
| CDY01588 | Canola | cytosol | 81.43 | 81.16 |
| CDX98609 | Canola | cytosol | 81.26 | 80.99 |
| CDY09282 | Canola | cytosol | 79.6 | 80.67 |
| CDY40521 | Canola | cytosol | 5.47 | 63.46 |
| CDY23627 | Canola | cytosol | 10.45 | 57.27 |
| CDX71236 | Canola | cytosol | 24.54 | 55.43 |
| CDX97503 | Canola | cytosol, extracellular | 9.95 | 52.17 |
| CDY63778 | Canola | cytosol | 39.3 | 49.07 |
| CDY53120 | Canola | nucleus | 32.17 | 39.51 |
| CDY40520 | Canola | cytosol | 22.89 | 30.94 |
| CDY43728 | Canola | cytosol | 31.01 | 24.93 |
Protein Annotations
| MapMan:17.6.1 | Gene3D:3.40.50.300 | InterPro:4Fe4S_Fe-S-bd | InterPro:4Fe4S_Fe_S_CS | GO:A0A078J9P9 | UniProt:A0A078J9P9 |
| InterPro:AAA+_ATPase | InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | EnsemblPlants:CDY60809 | ProteinID:CDY60809 | ProteinID:CDY60809.1 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0016787 |
| GO:GO:0016887 | EnsemblPlantsGene:GSBRNA2T00030095001 | InterPro:IPR003439 | InterPro:IPR017896 | InterPro:P-loop_NTPase | PFAM:PF00005 |
| PFAM:PF00037 | PFAM:PF04068 | PRINTS:PR01868 | ScanProsite:PS00198 | ScanProsite:PS00211 | PFscan:PS50893 |
| PFscan:PS51379 | PANTHER:PTHR19248 | PANTHER:PTHR19248:SF21 | InterPro:RLI1 | InterPro:RLI_dom_1 | InterPro:RNaseL-inhib_metal-bd_dom |
| SMART:SM00382 | SUPFAM:SSF52540 | SUPFAM:SSF54862 | UniParc:UPI0004EF01C3 | : | : |
Description
BnaA01g37290DBnaA01g37290D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J9P9]
Coordinates
chrLK033917:+:8727..11768
Molecular Weight (calculated)
68185.7 Da
IEP (calculated)
8.153
GRAVY (calculated)
-0.262
Length
603 amino acids
Sequence
(BLAST)
(BLAST)
001: MADRLTRIAI VSEDRCKPKK CRQECKKSCP VVKTGRLCIE VTPTSKTAFL SEELCIGCGI CVKKCPFEAI QIINLPKDLE KDTTHRYRSN AFKLHRLPVP
101: RPGQVLGLVG TNGIGKSTAL KILAGKLKPN LGRFDNPPDW QEILAHFRGS ELQSYFTRVV EENLKTAIKP QHVDQIKKIV QGDLGKMLEK LDERGMMEQI
201: VADLELNPVL DRRAKDVSGG ELQRFAIAAV FIKKAEIYMF DEPSSFLDVR QRLKAAQVVR SLLRPDSYVI VVEHDLSVLD YLSDFVCCLY GKPTAYGVVT
301: LPFSVREGIN VFLAGFIPTE NLRFRDESLT FKVSETPQES DGEVKSYARY KYPNMSKTLG SFKLEVMEGD FTDSQIVVML GENGTGKTTF IRMLAGALKP
401: DEGVEEDMPV FNVSYKPQTY DAQRECSVRQ LLHERIRDAY MHPQFVSDVM KPLQIEQLLD QAICTLSGGE SQRVGITLCL GKPADIYLID EPSAYLDSEQ
501: RITASKVIKR FILHAKKTAF IVEHDFIMAT YLADRVIVYE GQPSIKCMAH SPQSLLSGMN LFLSHLNITF RRDPTNFRPR INKLESTKDR EQKSAGSYYY
601: LDD
101: RPGQVLGLVG TNGIGKSTAL KILAGKLKPN LGRFDNPPDW QEILAHFRGS ELQSYFTRVV EENLKTAIKP QHVDQIKKIV QGDLGKMLEK LDERGMMEQI
201: VADLELNPVL DRRAKDVSGG ELQRFAIAAV FIKKAEIYMF DEPSSFLDVR QRLKAAQVVR SLLRPDSYVI VVEHDLSVLD YLSDFVCCLY GKPTAYGVVT
301: LPFSVREGIN VFLAGFIPTE NLRFRDESLT FKVSETPQES DGEVKSYARY KYPNMSKTLG SFKLEVMEGD FTDSQIVVML GENGTGKTTF IRMLAGALKP
401: DEGVEEDMPV FNVSYKPQTY DAQRECSVRQ LLHERIRDAY MHPQFVSDVM KPLQIEQLLD QAICTLSGGE SQRVGITLCL GKPADIYLID EPSAYLDSEQ
501: RITASKVIKR FILHAKKTAF IVEHDFIMAT YLADRVIVYE GQPSIKCMAH SPQSLLSGMN LFLSHLNITF RRDPTNFRPR INKLESTKDR EQKSAGSYYY
601: LDD
001: MSDRLTRIAI VSEDRCKPKK CRQECKKSCP VVKTGKLCIE VGSTSKSAFI SEELCIGCGI CVKKCPFEAI QIINLPKDLA KDTTHRYGAN GFKLHRLPIP
101: RPGQVLGLVG TNGIGKSTAL KILAGKLKPN LGRFNTPPDW EEILTHFRGS ELQSYFIRVV EENLKTAIKP QHVDYIKEVV RGNLGKMLEK LDERGLMEEI
201: CADMELNQVL EREARQVSGG ELQRFAIAAV FVKKADIYMF DEPSSYLDVR QRLKAAQVIR SLLRHDSYVI VVEHDLSVLD YLSDFVCCLY GKPGAYGVVT
301: LPFSVREGIN VFLAGFIPTE NLRFRDESLT FRVSETTQEN DGEVKSYARY KYPNMTKQLG DFKLEVMEGE FTDSQIIVML GENGTGKTTF IRMLAGAFPR
401: EEGVQSEIPE FNVSYKPQGN DSKRECTVRQ LLHDKIRDAC AHPQFMSDVI RPLQIEQLMD QVVKTLSGGE KQRVAITLCL GKPADIYLID EPSAHLDSEQ
501: RITASKVIKR FILHAKKTAF IVEHDFIMAT YLADRVIVYE GQPAVKCIAH SPQSLLSGMN HFLSHLNITF RRDPTNFRPR INKLESIKDK EQKTAGSYYY
601: LDD
101: RPGQVLGLVG TNGIGKSTAL KILAGKLKPN LGRFNTPPDW EEILTHFRGS ELQSYFIRVV EENLKTAIKP QHVDYIKEVV RGNLGKMLEK LDERGLMEEI
201: CADMELNQVL EREARQVSGG ELQRFAIAAV FVKKADIYMF DEPSSYLDVR QRLKAAQVIR SLLRHDSYVI VVEHDLSVLD YLSDFVCCLY GKPGAYGVVT
301: LPFSVREGIN VFLAGFIPTE NLRFRDESLT FRVSETTQEN DGEVKSYARY KYPNMTKQLG DFKLEVMEGE FTDSQIIVML GENGTGKTTF IRMLAGAFPR
401: EEGVQSEIPE FNVSYKPQGN DSKRECTVRQ LLHDKIRDAC AHPQFMSDVI RPLQIEQLMD QVVKTLSGGE KQRVAITLCL GKPADIYLID EPSAHLDSEQ
501: RITASKVIKR FILHAKKTAF IVEHDFIMAT YLADRVIVYE GQPAVKCIAH SPQSLLSGMN HFLSHLNITF RRDPTNFRPR INKLESIKDK EQKTAGSYYY
601: LDD
Arabidopsis Description
ABCE1ABC transporter E family member 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LID6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.