Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX82529 | Canola | cytosol | 90.05 | 97.66 |
| CDY60809 | Canola | cytosol | 83.91 | 83.91 |
| CDX99388 | Canola | cytosol | 77.78 | 77.52 |
| CDX78930 | Canola | cytosol | 77.61 | 77.36 |
| CDY05197 | Canola | cytosol | 77.61 | 77.36 |
| CDX76485 | Canola | cytosol | 76.95 | 76.69 |
| CDY01588 | Canola | cytosol | 76.95 | 76.69 |
| CDX98609 | Canola | cytosol | 76.78 | 76.53 |
| CDY09282 | Canola | cytosol | 75.12 | 76.13 |
| CDY40521 | Canola | cytosol | 5.8 | 67.31 |
| CDX71236 | Canola | cytosol | 29.02 | 65.54 |
| CDY23627 | Canola | cytosol | 11.61 | 63.64 |
| CDX97503 | Canola | cytosol, extracellular | 10.95 | 57.39 |
| CDY63778 | Canola | cytosol | 38.97 | 48.65 |
| CDY53120 | Canola | nucleus | 37.31 | 45.82 |
| CDY40520 | Canola | cytosol | 27.03 | 36.55 |
| CDY43728 | Canola | cytosol | 33.0 | 26.53 |
Protein Annotations
| MapMan:17.6.1 | Gene3D:3.40.50.300 | InterPro:4Fe4S_Fe-S-bd | InterPro:4Fe4S_Fe_S_CS | GO:A0A078CKX3 | InterPro:AAA+_ATPase |
| InterPro:ABC_transporter-like | EnsemblPlants:CDX75723 | ProteinID:CDX75723 | ProteinID:CDX75723.1 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0016787 | GO:GO:0016887 | EnsemblPlantsGene:GSBRNA2T00123640001 |
| InterPro:IPR003439 | InterPro:IPR017896 | InterPro:P-loop_NTPase | PFAM:PF00005 | PFAM:PF00037 | PFAM:PF04068 |
| PRINTS:PR01868 | ScanProsite:PS00198 | PFscan:PS50893 | PFscan:PS51379 | PANTHER:PTHR19248 | PANTHER:PTHR19248:SF21 |
| InterPro:RLI1 | InterPro:RLI_dom_1 | InterPro:RNaseL-inhib_metal-bd_dom | SMART:SM00382 | SUPFAM:SSF52540 | SUPFAM:SSF54862 |
| UniParc:UPI0004EF487B | : | : | : | : | : |
Description
BnaC03g38060D
Coordinates
chrLK031805:-:188401..191604
Molecular Weight (calculated)
67880.1 Da
IEP (calculated)
8.024
GRAVY (calculated)
-0.284
Length
603 amino acids
Sequence
(BLAST)
(BLAST)
001: MSDRLTRIAI VNSDRCKPKK CRQECKKSCP VVKTGKLCIE VTPASKTAFL SEELCIGCGI CVNKCPFEAI QIINLPKDLE KDTIHRYNSN GFKLHRLPVP
101: RPGQVLGLVG TNGIGKSTAL QVLAGKIKPN FGRYNNPPDW HEILAHFRGS ELQSYFIRLV EEKLKTAMKP QHVDVIKKVA KGTLGTVLEK LDERGMMAEI
201: CDAMDLNHLL DREATQVSGG ELQRFAIAAV CLKKADIYVF DEPSNFLDVR QRLKAAEVIR SLLRHDNYVI VVEHDLSVLD YLSDFVCCLY GKPTAYGVVT
301: LPFSVREGIN VFLAGFVPTE NLRFRDESLT FKVSDTPQES DGEVKSYARY KYPNMSKKLG DFKLDVMEGE FADSQIIVML GENGTGKTTF IRMLAGAFPS
401: EDGVESDMPE FNVSYKPQGN DSKRECTVRQ LLHDRIRDAY THPQFMSDVM KPLQIEELLD QAVNKLSGGE RQRVAITLCL GKPADIYLLD EPSAHLDSEQ
501: RITASKVIKR FILHAKKTAF VVEHDFMMAT YLADKVIVYE GQPGVKCTAH SPQSLASGMN LFLSHLNITF RRDPTNFRPR INKLESTKDR EQKLAGSYYF
601: LDD
101: RPGQVLGLVG TNGIGKSTAL QVLAGKIKPN FGRYNNPPDW HEILAHFRGS ELQSYFIRLV EEKLKTAMKP QHVDVIKKVA KGTLGTVLEK LDERGMMAEI
201: CDAMDLNHLL DREATQVSGG ELQRFAIAAV CLKKADIYVF DEPSNFLDVR QRLKAAEVIR SLLRHDNYVI VVEHDLSVLD YLSDFVCCLY GKPTAYGVVT
301: LPFSVREGIN VFLAGFVPTE NLRFRDESLT FKVSDTPQES DGEVKSYARY KYPNMSKKLG DFKLDVMEGE FADSQIIVML GENGTGKTTF IRMLAGAFPS
401: EDGVESDMPE FNVSYKPQGN DSKRECTVRQ LLHDRIRDAY THPQFMSDVM KPLQIEELLD QAVNKLSGGE RQRVAITLCL GKPADIYLLD EPSAHLDSEQ
501: RITASKVIKR FILHAKKTAF VVEHDFMMAT YLADKVIVYE GQPGVKCTAH SPQSLASGMN LFLSHLNITF RRDPTNFRPR INKLESTKDR EQKLAGSYYF
601: LDD
001: MSDRLTRIAI VSEDRCKPKK CRQECKKSCP VVKTGKLCIE VGSTSKSAFI SEELCIGCGI CVKKCPFEAI QIINLPKDLA KDTTHRYGAN GFKLHRLPIP
101: RPGQVLGLVG TNGIGKSTAL KILAGKLKPN LGRFNTPPDW EEILTHFRGS ELQSYFIRVV EENLKTAIKP QHVDYIKEVV RGNLGKMLEK LDERGLMEEI
201: CADMELNQVL EREARQVSGG ELQRFAIAAV FVKKADIYMF DEPSSYLDVR QRLKAAQVIR SLLRHDSYVI VVEHDLSVLD YLSDFVCCLY GKPGAYGVVT
301: LPFSVREGIN VFLAGFIPTE NLRFRDESLT FRVSETTQEN DGEVKSYARY KYPNMTKQLG DFKLEVMEGE FTDSQIIVML GENGTGKTTF IRMLAGAFPR
401: EEGVQSEIPE FNVSYKPQGN DSKRECTVRQ LLHDKIRDAC AHPQFMSDVI RPLQIEQLMD QVVKTLSGGE KQRVAITLCL GKPADIYLID EPSAHLDSEQ
501: RITASKVIKR FILHAKKTAF IVEHDFIMAT YLADRVIVYE GQPAVKCIAH SPQSLLSGMN HFLSHLNITF RRDPTNFRPR INKLESIKDK EQKTAGSYYY
601: LDD
101: RPGQVLGLVG TNGIGKSTAL KILAGKLKPN LGRFNTPPDW EEILTHFRGS ELQSYFIRVV EENLKTAIKP QHVDYIKEVV RGNLGKMLEK LDERGLMEEI
201: CADMELNQVL EREARQVSGG ELQRFAIAAV FVKKADIYMF DEPSSYLDVR QRLKAAQVIR SLLRHDSYVI VVEHDLSVLD YLSDFVCCLY GKPGAYGVVT
301: LPFSVREGIN VFLAGFIPTE NLRFRDESLT FRVSETTQEN DGEVKSYARY KYPNMTKQLG DFKLEVMEGE FTDSQIIVML GENGTGKTTF IRMLAGAFPR
401: EEGVQSEIPE FNVSYKPQGN DSKRECTVRQ LLHDKIRDAC AHPQFMSDVI RPLQIEQLMD QVVKTLSGGE KQRVAITLCL GKPADIYLID EPSAHLDSEQ
501: RITASKVIKR FILHAKKTAF IVEHDFIMAT YLADRVIVYE GQPAVKCIAH SPQSLLSGMN HFLSHLNITF RRDPTNFRPR INKLESIKDK EQKTAGSYYY
601: LDD
Arabidopsis Description
ABCE1ABC transporter E family member 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LID6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.