CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra001515.1-P	Field mustard	cytosol	99.1	91.38
CDX75723	Canola	cytosol	97.66	90.05
CDY60809	Canola	cytosol	82.55	76.12
CDX99388	Canola	cytosol	76.44	70.25
CDX78930	Canola	cytosol	76.26	70.08
CDY05197	Canola	cytosol	76.26	70.08
CDX76485	Canola	cytosol	75.54	69.42
CDX98609	Canola	cytosol	75.54	69.42
CDY01588	Canola	cytosol	75.54	69.42
CDY40521	Canola	cytosol	6.47	69.23
CDY09282	Canola	cytosol	73.38	68.57
CDY23627	Canola	cytosol	11.87	60.0
CDX97503	Canola	cytosol, extracellular	11.51	55.65
CDX71236	Canola	cytosol	26.26	54.68
CDY63778	Canola	cytosol	37.23	42.86
CDY53120	Canola	nucleus	36.33	41.14
CDY40520	Canola	cytosol	25.0	31.17
CDY43728	Canola	cytosol	34.35	25.47

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	InterPro:4Fe4S_Fe-S-bd	InterPro:4Fe4S_Fe_S_CS	GO:A0A078D2T4	InterPro:AAA+_ATPase
InterPro:ABC_transporter-like	EnsemblPlants:CDX82529	ProteinID:CDX82529	ProteinID:CDX82529.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0016787	GO:GO:0016887	EnsemblPlantsGene:GSBRNA2T00137682001
InterPro:IPR003439	InterPro:IPR017896	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF00037	PFAM:PF04068
PRINTS:PR01868	ScanProsite:PS00198	PFscan:PS50893	PFscan:PS51379	PANTHER:PTHR19248	PANTHER:PTHR19248:SF21
InterPro:RLI1	InterPro:RNaseL-inhib_metal-bd_dom	SMART:SM00382	SUPFAM:SSF52540	SUPFAM:SSF54862	UniParc:UPI0004EECE28

Description

BnaA03g32920D

Coordinates

chrLK031828:+:1745713..1748371

Molecular Weight (calculated)

62536.8 Da

IEP (calculated)

8.792

GRAVY (calculated)

-0.351

Length

556 amino acids

Sequence
(BLAST)

001: MSDRLTRIAI VNSDRCKPKK CRQECKKSCP VVKTGKLCIE VTPASKTAFL SEELCIGCGI CVKKCPFEAI QIINLPKDLE KDTIHRYNSN GFKLHRLPVP
101: RPGQVLGLVG TNGIGKSTAL QILAGKIKPN FGRYNNPPDW HEILAHFRGS ELQSYFIRLV EEKLKTAMKP QHVDAIKKVA KGTLGTVLEK LDEKGMMAEI
201: CDAMDLNHLL DREATQVSGG ELQRFAIAAV CLKKADIYVF DEPSNFLDVR QRLKAADVIR SLLKHDKFPT AYGVVTLPFS SLTFKVSDTP QESDGEVKSY
301: ARYKYPNMSK KLGDFKLDVM EGEFTDSQII VMLGENGTGK TTFIRMLAGA FPSEEGVESE MPEFNVSYKP QGNDSKRECT VRQLLHDRIR DAYTHPQFMS
401: DVMKPLRIEE LLDQAVNKLS GGERQRVAIT LCLGKPADIY LLDEPSAHLD SEQRITASKV IKRFILHAKK TAFVVEHDFM MATYLADKVI VYEGQPGVKC
501: TAHSPQSLSS GMNLFLSHLN ITFRRDPTNF RPRINKLEST KDREQKLAGS YYFLDD

Best Arabidopsis Sequence Match ( AT3G13640.1 )
(BLAST)

001: MSDRLTRIAI VSEDRCKPKK CRQECKKSCP VVKTGKLCIE VGSTSKSAFI SEELCIGCGI CVKKCPFEAI QIINLPKDLA KDTTHRYGAN GFKLHRLPIP
101: RPGQVLGLVG TNGIGKSTAL KILAGKLKPN LGRFNTPPDW EEILTHFRGS ELQSYFIRVV EENLKTAIKP QHVDYIKEVV RGNLGKMLEK LDERGLMEEI
201: CADMELNQVL EREARQVSGG ELQRFAIAAV FVKKADIYMF DEPSSYLDVR QRLKAAQVIR SLLRHDSYVI VVEHDLSVLD YLSDFVCCLY GKPGAYGVVT
301: LPFSVREGIN VFLAGFIPTE NLRFRDESLT FRVSETTQEN DGEVKSYARY KYPNMTKQLG DFKLEVMEGE FTDSQIIVML GENGTGKTTF IRMLAGAFPR
401: EEGVQSEIPE FNVSYKPQGN DSKRECTVRQ LLHDKIRDAC AHPQFMSDVI RPLQIEQLMD QVVKTLSGGE KQRVAITLCL GKPADIYLID EPSAHLDSEQ
501: RITASKVIKR FILHAKKTAF IVEHDFIMAT YLADRVIVYE GQPAVKCIAH SPQSLLSGMN HFLSHLNITF RRDPTNFRPR INKLESIKDK EQKTAGSYYY
601: LDD

Arabidopsis Description

ABCE1ABC transporter E family member 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LID6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.