Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 1
- nucleus 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX87520 | Canola | nucleus | 94.74 | 93.26 |
| CDY41784 | Canola | plastid | 82.37 | 92.06 |
| CDY62408 | Canola | nucleus, plasma membrane, plastid | 42.89 | 77.25 |
| AT1G77390.1 | Thale cress | plastid | 79.74 | 68.55 |
| CDX92090 | Canola | mitochondrion, nucleus | 63.68 | 67.79 |
| Os05t0237100-01 | Rice | extracellular | 28.42 | 54.82 |
| CDY02719 | Canola | plastid | 55.0 | 48.72 |
| CDX85466 | Canola | plastid | 53.68 | 48.34 |
| CDY06752 | Canola | nucleus | 35.0 | 46.67 |
| CDY25649 | Canola | plastid | 53.16 | 46.22 |
| CDY65994 | Canola | plastid | 53.68 | 46.05 |
| TraesCS1B01G151800.3 | Wheat | nucleus | 40.79 | 43.66 |
| VIT_18s0001g02060.t01 | Wine grape | plastid | 56.58 | 43.43 |
| KRH64625 | Soybean | plastid | 55.26 | 43.39 |
| KRH53279 | Soybean | plastid | 54.74 | 43.33 |
| Solyc11g005090.1.1 | Tomato | plastid | 55.79 | 43.27 |
| Zm00001d032128_P001 | Maize | cytosol | 17.89 | 43.04 |
| PGSC0003DMT400015424 | Potato | plastid | 53.42 | 43.01 |
| CDY22369 | Canola | nucleus | 38.68 | 41.88 |
| CDY17091 | Canola | nucleus | 38.42 | 40.78 |
| KRH17986 | Soybean | plastid | 53.95 | 40.76 |
| KRH16410 | Soybean | plastid | 53.95 | 40.67 |
| CDY48212 | Canola | nucleus | 40.26 | 40.58 |
| Os12t0298950-00 | Rice | nucleus | 47.63 | 40.49 |
| CDY23653 | Canola | nucleus | 37.89 | 40.34 |
| CDY61993 | Canola | nucleus | 40.0 | 40.32 |
| CDY17037 | Canola | nucleus, plastid | 38.16 | 39.84 |
| CDY47595 | Canola | nucleus, plastid | 38.42 | 39.35 |
| CDY53304 | Canola | plastid | 42.11 | 39.12 |
| CDY06757 | Canola | nucleus, plastid | 37.37 | 39.12 |
| Os01t0233100-00 | Rice | nucleus, plastid | 50.53 | 39.1 |
| CDY66770 | Canola | nucleus | 37.11 | 38.95 |
| CDY47596 | Canola | nucleus | 37.11 | 38.84 |
| CDX81722 | Canola | nucleus, plastid | 41.05 | 38.71 |
| CDY17039 | Canola | nucleus | 36.84 | 38.57 |
| GSMUA_Achr5P06960_001 | Banana | nucleus, plastid | 50.26 | 38.2 |
| GSMUA_Achr2P19220_001 | Banana | nucleus, plastid | 50.26 | 38.05 |
| TraesCS3D01G164600.1 | Wheat | plastid | 51.05 | 38.04 |
| Os01t0233500-01 | Rice | nucleus, plastid | 50.79 | 37.99 |
| TraesCS3B01G183400.1 | Wheat | plastid | 50.79 | 37.84 |
| TraesCS3A01G157000.1 | Wheat | plastid | 51.05 | 37.82 |
| CDX87087 | Canola | plastid | 41.32 | 37.65 |
| Zm00001d040381_P001 | Maize | plastid | 52.11 | 37.15 |
| TraesCS1D01G134100.2 | Wheat | nucleus, plastid | 46.05 | 36.69 |
| KXG21616 | Sorghum | nucleus, plastid | 46.05 | 36.53 |
| Zm00001d021353_P002 | Maize | mitochondrion, nucleus | 19.21 | 36.5 |
| CDX79389 | Canola | plastid | 41.05 | 36.03 |
| CDY36574 | Canola | mitochondrion, nucleus | 41.32 | 36.01 |
| CDY66415 | Canola | nucleus | 41.05 | 35.94 |
| CDY31481 | Canola | nucleus | 20.53 | 35.94 |
| CDX96836 | Canola | nucleus, plastid | 41.32 | 35.68 |
| CDX67944 | Canola | plastid | 40.53 | 35.65 |
| CDX97090 | Canola | nucleus | 40.26 | 35.09 |
| CDY39984 | Canola | plastid | 41.05 | 34.82 |
| CDX69768 | Canola | nucleus, plastid | 40.0 | 34.78 |
| CDY37592 | Canola | mitochondrion, plastid | 41.32 | 34.35 |
| CDY38664 | Canola | nucleus, plastid | 41.05 | 34.29 |
| CDX87305 | Canola | plastid | 41.05 | 33.77 |
| Zm00001d009011_P001 | Maize | nucleus, plastid | 44.74 | 33.33 |
| CDX72551 | Canola | nucleus | 33.16 | 31.42 |
| CDY67210 | Canola | nucleus | 33.42 | 31.28 |
| TraesCS1A01G138300.1 | Wheat | nucleus, plastid | 42.89 | 31.05 |
| CDY62475 | Canola | nucleus | 27.63 | 29.91 |
| CDY69551 | Canola | nucleus | 27.63 | 29.58 |
| CDX69311 | Canola | nucleus | 32.37 | 29.36 |
| Zm00001d010404_P001 | Maize | nucleus | 37.37 | 29.28 |
| CDY26816 | Canola | nucleus | 31.05 | 28.99 |
| CDX75659 | Canola | nucleus | 32.63 | 28.97 |
| CDY07838 | Canola | nucleus | 31.84 | 28.95 |
| CDY29184 | Canola | nucleus | 31.84 | 28.88 |
| CDY30357 | Canola | nucleus | 30.53 | 28.36 |
| CDX85942 | Canola | nucleus | 30.0 | 27.94 |
| CDY11354 | Canola | plastid | 31.32 | 27.48 |
| CDY33634 | Canola | nucleus | 29.47 | 27.45 |
| CDY29520 | Canola | nucleus | 29.47 | 27.32 |
| CDX96631 | Canola | nucleus | 29.47 | 27.32 |
| CDX88261 | Canola | nucleus | 30.79 | 27.21 |
| CDX87612 | Canola | nucleus | 30.79 | 27.15 |
| CDX80988 | Canola | plastid | 30.53 | 27.1 |
| CDX68105 | Canola | nucleus | 27.89 | 26.84 |
| CDY14091 | Canola | plastid | 30.53 | 17.68 |
| CDY33338 | Canola | nucleus | 26.58 | 17.29 |
| CDY35083 | Canola | cytosol, endoplasmic reticulum, nucleus | 26.58 | 16.58 |
| CDY04980 | Canola | nucleus | 30.53 | 16.16 |
| CDX96819 | Canola | nucleus | 27.37 | 16.12 |
| CDY19803 | Canola | golgi, nucleus, plasma membrane, plastid | 41.58 | 15.98 |
| CDX83953 | Canola | nucleus | 26.84 | 15.57 |
Protein Annotations
| Gene3D:1.10.472.10 | MapMan:13.1.1.1.1 | GO:A0A078DM82 | EnsemblPlants:CDX88368 | ProteinID:CDX88368 | ProteinID:CDX88368.1 |
| InterPro:Cyclin-like | InterPro:Cyclin-like_sf | InterPro:Cyclin_C-dom | InterPro:Cyclin_N | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | EnsemblPlantsGene:GSBRNA2T00147891001 | PFAM:PF00134 | PFAM:PF02984 | PIRSF:PIRSF001771 |
| ScanProsite:PS00292 | PANTHER:PTHR10177 | PANTHER:PTHR10177:SF239 | SMART:SM00385 | SMART:SM01332 | SUPFAM:SSF47954 |
| UniParc:UPI0004EE2D8D | SEG:seg | : | : | : | : |
Description
BnaC06g38120D
Coordinates
chrLK031855:-:594463..596495
Molecular Weight (calculated)
42672.2 Da
IEP (calculated)
7.988
GRAVY (calculated)
-0.262
Length
380 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSSSSSRNL PKENPLSRPS VVAKTRAPLG DVVNRRNPLG DITNQKTGSR ISAPSSTLVH CSNKIGKSKK APKPPKSNVL VPYEDIESSL DAESDLGNEV
101: DDIDSNLVDP QLCGAFACDI YEHLRSSEVK KRPDFDYMER VQSNINASMR TILIDWLVEV AEEYRLLPET LYLAVNCLDR YLSGNVITKQ NLQLLGVSCM
201: MIASKYEEVC VPQVESFCYI TDNTYSRNEL LEMESSVLNY LKFELTTPTA KCFLRRFVRA AKGKKEVTSL LFESLASYLS ELSLLDYAML RYAPSLVAAS
301: AVFLAQCILH PSRKPWSSTL EHYTSYRAKH LEGCVKNLLQ LCHESPSADV VAVRKKYSQD KYKFAAKKFC PTSLPQELFL
101: DDIDSNLVDP QLCGAFACDI YEHLRSSEVK KRPDFDYMER VQSNINASMR TILIDWLVEV AEEYRLLPET LYLAVNCLDR YLSGNVITKQ NLQLLGVSCM
201: MIASKYEEVC VPQVESFCYI TDNTYSRNEL LEMESSVLNY LKFELTTPTA KCFLRRFVRA AKGKKEVTSL LFESLASYLS ELSLLDYAML RYAPSLVAAS
301: AVFLAQCILH PSRKPWSSTL EHYTSYRAKH LEGCVKNLLQ LCHESPSADV VAVRKKYSQD KYKFAAKKFC PTSLPQELFL
001: MSSSSRNLSQ ENPIPRPNLA KTRTSLRDVG NRRAPLGDIT NQKNGSRNPS PSSTLVNCSN KIGQSKKAPK PALSRNWNLG ILDSGLPPKP NAKSNIIVPY
101: EDTELLQSDD SLLCSSPALS LDASPTQSDP SISTHDSLTN HVVDYMVEST TDDGNDDDDD EIVNIDSDLM DPQLCASFAC DIYEHLRVSE VNKRPALDYM
201: ERTQSSINAS MRSILIDWLV EVAEEYRLSP ETLYLAVNYV DRYLTGNAIN KQNLQLLGVT CMMIAAKYEE VCVPQVEDFC YITDNTYLRN ELLEMESSVL
301: NYLKFELTTP TAKCFLRRFL RAAQGRKEVP SLLSECLACY LTELSLLDYA MLRYAPSLVA ASAVFLAQYT LHPSRKPWNA TLEHYTSYRA KHMEACVKNL
401: LQLCNEKLSS DVVAIRKKYS QHKYKFAAKK LCPTSLPQEL FL
101: EDTELLQSDD SLLCSSPALS LDASPTQSDP SISTHDSLTN HVVDYMVEST TDDGNDDDDD EIVNIDSDLM DPQLCASFAC DIYEHLRVSE VNKRPALDYM
201: ERTQSSINAS MRSILIDWLV EVAEEYRLSP ETLYLAVNYV DRYLTGNAIN KQNLQLLGVT CMMIAAKYEE VCVPQVEDFC YITDNTYLRN ELLEMESSVL
301: NYLKFELTTP TAKCFLRRFL RAAQGRKEVP SLLSECLACY LTELSLLDYA MLRYAPSLVA ASAVFLAQYT LHPSRKPWNA TLEHYTSYRA KHMEACVKNL
401: LQLCNEKLSS DVVAIRKKYS QHKYKFAAKK LCPTSLPQEL FL
Arabidopsis Description
CYCA1-2TAM [Source:UniProtKB/TrEMBL;Acc:A0A178WDV8]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.