Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 1
- nucleus 2
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX85466 | Canola | plastid | 94.17 | 95.73 |
| Bra023606.1-P | Field mustard | plastid | 93.01 | 95.23 |
| CDY65994 | Canola | plastid | 82.28 | 79.68 |
| CDY25649 | Canola | plastid | 80.65 | 79.18 |
| AT1G44110.1 | Thale cress | plastid | 75.99 | 70.87 |
| Os05t0237100-01 | Rice | extracellular | 28.9 | 62.94 |
| CDX88368 | Canola | plastid | 48.72 | 55.0 |
| CDY41784 | Canola | plastid | 43.59 | 55.0 |
| CDX87520 | Canola | nucleus | 49.42 | 54.92 |
| CDY62408 | Canola | nucleus, plasma membrane, plastid | 26.81 | 54.5 |
| KRH64625 | Soybean | plastid | 61.31 | 54.34 |
| KRH53279 | Soybean | plastid | 60.61 | 54.17 |
| TraesCS1B01G151800.3 | Wheat | nucleus | 43.82 | 52.96 |
| VIT_18s0001g02060.t01 | Wine grape | plastid | 58.97 | 51.11 |
| Solyc11g005090.1.1 | Tomato | plastid | 57.34 | 50.2 |
| CDX92090 | Canola | mitochondrion, nucleus | 41.72 | 50.14 |
| PGSC0003DMT400015424 | Potato | plastid | 54.78 | 49.79 |
| KRH17986 | Soybean | plastid | 57.81 | 49.3 |
| KRH16410 | Soybean | plastid | 57.58 | 49.01 |
| Os12t0298950-00 | Rice | nucleus | 49.88 | 47.87 |
| Zm00001d032128_P001 | Maize | cytosol | 17.25 | 46.84 |
| Os01t0233100-00 | Rice | nucleus, plastid | 52.91 | 46.23 |
| GSMUA_Achr2P19220_001 | Banana | nucleus, plastid | 53.85 | 46.02 |
| GSMUA_Achr5P06960_001 | Banana | nucleus, plastid | 53.61 | 46.0 |
| CDY06752 | Canola | nucleus | 30.54 | 45.96 |
| Os01t0233500-01 | Rice | nucleus, plastid | 54.31 | 45.87 |
| TraesCS3B01G183400.1 | Wheat | plastid | 53.85 | 45.29 |
| TraesCS3D01G164600.1 | Wheat | plastid | 53.61 | 45.1 |
| TraesCS3A01G157000.1 | Wheat | plastid | 53.38 | 44.64 |
| TraesCS1D01G134100.2 | Wheat | nucleus, plastid | 49.42 | 44.44 |
| Zm00001d040381_P001 | Maize | plastid | 55.01 | 44.28 |
| CDY61993 | Canola | nucleus | 38.23 | 43.5 |
| CDY48212 | Canola | nucleus | 37.53 | 42.71 |
| CDY22369 | Canola | nucleus | 34.73 | 42.45 |
| KXG21616 | Sorghum | nucleus, plastid | 46.85 | 41.96 |
| CDY66770 | Canola | nucleus | 35.2 | 41.71 |
| CDY06757 | Canola | nucleus, plastid | 34.73 | 41.05 |
| CDY17091 | Canola | nucleus | 34.03 | 40.78 |
| CDY23653 | Canola | nucleus | 33.57 | 40.34 |
| CDX81722 | Canola | nucleus, plastid | 37.76 | 40.2 |
| CDY17037 | Canola | nucleus, plastid | 34.03 | 40.11 |
| CDY53304 | Canola | plastid | 38.23 | 40.1 |
| CDY47596 | Canola | nucleus | 33.8 | 39.94 |
| CDY17039 | Canola | nucleus | 33.57 | 39.67 |
| CDY31481 | Canola | nucleus | 20.05 | 39.63 |
| Zm00001d009011_P001 | Maize | nucleus, plastid | 46.85 | 39.41 |
| CDY47595 | Canola | nucleus, plastid | 34.03 | 39.35 |
| Zm00001d021353_P002 | Maize | mitochondrion, nucleus | 18.18 | 39.0 |
| CDX79389 | Canola | plastid | 38.69 | 38.34 |
| CDY66415 | Canola | nucleus | 38.69 | 38.25 |
| CDX67944 | Canola | plastid | 38.46 | 38.19 |
| CDX87087 | Canola | plastid | 37.06 | 38.13 |
| TraesCS1A01G138300.1 | Wheat | nucleus, plastid | 46.62 | 38.1 |
| CDY36574 | Canola | mitochondrion, nucleus | 38.46 | 37.84 |
| CDY39984 | Canola | plastid | 39.16 | 37.5 |
| CDX69768 | Canola | nucleus, plastid | 38.0 | 37.3 |
| CDX97090 | Canola | nucleus | 37.76 | 37.16 |
| CDY38664 | Canola | nucleus, plastid | 39.39 | 37.14 |
| CDX96836 | Canola | nucleus, plastid | 38.0 | 37.05 |
| CDY37592 | Canola | mitochondrion, plastid | 39.16 | 36.76 |
| CDX87305 | Canola | plastid | 38.69 | 35.93 |
| Zm00001d010404_P001 | Maize | nucleus | 37.53 | 33.2 |
| CDY62475 | Canola | nucleus | 25.17 | 30.77 |
| CDY69551 | Canola | nucleus | 25.41 | 30.7 |
| CDX72551 | Canola | nucleus | 28.67 | 30.67 |
| CDY67210 | Canola | nucleus | 28.44 | 30.05 |
| CDX85942 | Canola | nucleus | 28.44 | 29.9 |
| CDX96631 | Canola | nucleus | 28.44 | 29.76 |
| CDY07838 | Canola | nucleus | 28.9 | 29.67 |
| CDY33634 | Canola | nucleus | 28.21 | 29.66 |
| CDY29184 | Canola | nucleus | 28.9 | 29.59 |
| CDY29520 | Canola | nucleus | 27.74 | 29.02 |
| CDY30357 | Canola | nucleus | 27.51 | 28.85 |
| CDX88261 | Canola | nucleus | 28.9 | 28.84 |
| CDX87612 | Canola | nucleus | 28.9 | 28.77 |
| CDY26816 | Canola | nucleus | 27.27 | 28.75 |
| CDX68105 | Canola | nucleus | 26.34 | 28.61 |
| CDY11354 | Canola | plastid | 28.21 | 27.94 |
| CDX80988 | Canola | plastid | 27.74 | 27.8 |
| CDX69311 | Canola | nucleus | 26.57 | 27.21 |
| CDX75659 | Canola | nucleus | 26.81 | 26.87 |
| CDY14091 | Canola | plastid | 27.74 | 18.14 |
| CDY33338 | Canola | nucleus | 24.48 | 17.98 |
| CDY35083 | Canola | cytosol, endoplasmic reticulum, nucleus | 24.24 | 17.08 |
| CDY04980 | Canola | nucleus | 27.51 | 16.43 |
| CDY19803 | Canola | golgi, nucleus, plasma membrane, plastid | 37.53 | 16.28 |
| CDX96819 | Canola | nucleus | 24.01 | 15.97 |
| CDX83953 | Canola | nucleus | 23.31 | 15.27 |
Protein Annotations
| Gene3D:1.10.472.10 | MapMan:13.1.1.1.1 | GO:A0A078EPW7 | EnsemblPlants:CDY02719 | ProteinID:CDY02719 | ProteinID:CDY02719.1 |
| InterPro:Cyclin-like | InterPro:Cyclin-like_sf | InterPro:Cyclin_C-dom | InterPro:Cyclin_N | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | EnsemblPlantsGene:GSBRNA2T00114871001 | PFAM:PF00134 | PFAM:PF02984 | PIRSF:PIRSF001771 |
| ScanProsite:PS00292 | PANTHER:PTHR10177 | PANTHER:PTHR10177:SF239 | SMART:SM00385 | SMART:SM01332 | SUPFAM:SSF47954 |
| UniParc:UPI0004EF2469 | SEG:seg | : | : | : | : |
Description
BnaC02g07160D
Coordinates
chrLK031936:-:1067584..1069712
Molecular Weight (calculated)
48278.7 Da
IEP (calculated)
7.703
GRAVY (calculated)
-0.378
Length
429 amino acids
Sequence
(BLAST)
(BLAST)
001: MSKTTNQNRR PSFTSSAESS MRKRHGPPPP SSSSVKPISN TAVMVAKKRA PLGNITNQRK DSRIFPNSSS ADSAHCPNKS AKLKLAPPTT QPVCVNACET
101: KSTCEEEVSA VERKAFSNLH ITPCSDTTTN VRRDVLSETE NKEDKFMNID NGDDADPQLC ATFACDIYNH LRAAEAKKQP AVDYMETVQK DVNSTMRGIL
201: VDWLVEVSEE YRLVPETLYL TVNYIDRYLS GNVISRQKLQ LLGVACMMIA AKYEEVCAPQ VEEFCYITDN TYLKDEVLDM ESAVLNYLKF EMSAPTVKCF
301: LRRFSRAAQG VHEAPCMQLE CMASYIAELS LLEYTMLSHP PSLVAASAIF LAKYTLDPTR RPWNSTLQHY TQYEALELRG CVMDLQRLCS NAHVSTLPAV
401: RDKYSQHKYK FVAKKFCPSI IPPEFFKNC
101: KSTCEEEVSA VERKAFSNLH ITPCSDTTTN VRRDVLSETE NKEDKFMNID NGDDADPQLC ATFACDIYNH LRAAEAKKQP AVDYMETVQK DVNSTMRGIL
201: VDWLVEVSEE YRLVPETLYL TVNYIDRYLS GNVISRQKLQ LLGVACMMIA AKYEEVCAPQ VEEFCYITDN TYLKDEVLDM ESAVLNYLKF EMSAPTVKCF
301: LRRFSRAAQG VHEAPCMQLE CMASYIAELS LLEYTMLSHP PSLVAASAIF LAKYTLDPTR RPWNSTLQHY TQYEALELRG CVMDLQRLCS NAHVSTLPAV
401: RDKYSQHKYK FVAKKFCPSI IPPEFFKNC
001: MSNILQNRRS SFSSSTKSSL AKRQAPSSSE NSVKLMPAMT KKRAPLSNIT NQKIASRLQN SDSVHCSNKS AKLKIAPSVC VNASFSSNLQ QSIVPHKVAS
101: SPSKSDDGSV SMDETRSSSD SYKSPQVEYI ENDDVSAVVS IERKALSNLF ITPNSETIDN YCSRDVLSDM KKMDKNQIVN IDSNNGDPQL CATFACDIYK
201: HLRASEAKKR PDVDYMERVQ KDVNSSMRGI LVDWLIEVSE EYRLVPETLY LTVNYIDRYL SGNVISRQKL QLLGVACMMI AAKYEEICAP QVEEFCYITD
301: NTYLKDEVLD MESDVLNYLK FEMTAPTTKC FLRRFVRAAH GVHEAPLMQL ECMANYIAEL SLLEYTMLSH SPSLVAASAI FLAKYILDPT RRPWNSTLQH
401: YTQYKAMELR GCVKDLQRLC STAHGSTLPA VREKYSQHKY KFVAKKFCPS VIPQEFFNNS
101: SPSKSDDGSV SMDETRSSSD SYKSPQVEYI ENDDVSAVVS IERKALSNLF ITPNSETIDN YCSRDVLSDM KKMDKNQIVN IDSNNGDPQL CATFACDIYK
201: HLRASEAKKR PDVDYMERVQ KDVNSSMRGI LVDWLIEVSE EYRLVPETLY LTVNYIDRYL SGNVISRQKL QLLGVACMMI AAKYEEICAP QVEEFCYITD
301: NTYLKDEVLD MESDVLNYLK FEMTAPTTKC FLRRFVRAAH GVHEAPLMQL ECMANYIAEL SLLEYTMLSH SPSLVAASAI FLAKYILDPT RRPWNSTLQH
401: YTQYKAMELR GCVKDLQRLC STAHGSTLPA VREKYSQHKY KFVAKKFCPS VIPQEFFNNS
Arabidopsis Description
CYCA1-1CYCA1 [Source:UniProtKB/TrEMBL;Acc:A0A178W0H5]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.