Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
Ath locusA | locusB | Ath locusB | Paper |
---|---|---|---|
AT2G17620.1 | CDX87588 | AT1G76540.1 | 12857813 |
AT2G17620.1 | CDX88294 | AT1G76540.1 | 12857813 |
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Bra037265.1-P | Field mustard | nucleus | 99.51 | 99.51 |
CDY26816 | Canola | nucleus | 93.89 | 94.35 |
CDY07838 | Canola | nucleus | 83.86 | 82.06 |
CDY29184 | Canola | nucleus | 83.86 | 81.86 |
AT2G17620.1 | Thale cress | nucleus | 84.35 | 80.42 |
CDX72551 | Canola | nucleus | 73.59 | 75.06 |
CDY67210 | Canola | nucleus | 73.59 | 74.14 |
CDY31481 | Canola | nucleus | 35.45 | 66.82 |
KRH28901 | Soybean | nucleus | 61.61 | 58.2 |
KRH76553 | Soybean | nucleus | 61.37 | 58.1 |
GSMUA_Achr5P19270_001 | Banana | cytosol | 29.34 | 55.3 |
PGSC0003DMT400093973 | Potato | nucleus | 44.01 | 54.55 |
Solyc02g061650.1.1 | Tomato | nucleus | 46.45 | 54.13 |
CDX85942 | Canola | nucleus | 53.3 | 53.43 |
CDY33634 | Canola | nucleus | 52.57 | 52.7 |
CDX68105 | Canola | nucleus | 50.86 | 52.66 |
CDX96631 | Canola | nucleus | 52.57 | 52.44 |
CDX88261 | Canola | nucleus | 54.52 | 51.86 |
CDX87612 | Canola | nucleus | 54.28 | 51.51 |
CDY29520 | Canola | nucleus | 51.34 | 51.22 |
GSMUA_Achr11P... | Banana | nucleus | 50.12 | 50.25 |
Os06t0726800-01 | Rice | nucleus | 51.1 | 49.88 |
KXG20945 | Sorghum | nucleus | 51.59 | 49.76 |
GSMUA_Achr8P13320_001 | Banana | nucleus | 50.86 | 49.52 |
Zm00001d036360_P002 | Maize | nucleus | 51.1 | 49.29 |
HORVU0Hr1G022770.1 | Barley | nucleus, plastid | 33.25 | 48.92 |
TraesCS7B01G472800.1 | Wheat | nucleus | 49.39 | 48.21 |
GSMUA_Achr5P19110_001 | Banana | nucleus | 49.88 | 48.11 |
HORVU7Hr1G121820.6 | Barley | nucleus | 49.39 | 48.1 |
Os04t0563700-01 | Rice | mitochondrion | 49.14 | 47.86 |
TraesCS7D01G536000.1 | Wheat | nucleus | 48.9 | 47.73 |
TraesCS2B01G422800.1 | Wheat | nucleus | 47.68 | 47.68 |
TraesCS2A01G404800.1 | Wheat | nucleus | 46.94 | 47.41 |
TraesCS7A01G549500.1 | Wheat | nucleus | 48.41 | 47.26 |
Zm00001d026129_P001 | Maize | nucleus | 48.66 | 46.71 |
TraesCS2D01G401700.1 | Wheat | nucleus, plastid | 47.68 | 46.32 |
EES12664 | Sorghum | nucleus | 48.9 | 46.3 |
Zm00001d002662_P010 | Maize | nucleus | 47.68 | 42.86 |
HORVU2Hr1G096070.2 | Barley | nucleus | 46.45 | 40.34 |
CDY62475 | Canola | nucleus | 33.25 | 38.75 |
CDY69551 | Canola | nucleus | 33.01 | 38.03 |
CDY06752 | Canola | nucleus | 24.94 | 35.79 |
CDX80988 | Canola | plastid | 36.43 | 34.81 |
CDY11354 | Canola | plastid | 36.67 | 34.64 |
CDX69311 | Canola | nucleus | 34.47 | 33.65 |
CDX75659 | Canola | nucleus | 34.96 | 33.41 |
GSMUA_Achr11P... | Banana | endoplasmic reticulum, vacuole | 52.08 | 31.89 |
CDY17091 | Canola | nucleus | 27.87 | 31.84 |
CDY17039 | Canola | nucleus | 28.12 | 31.68 |
CDY47596 | Canola | nucleus | 28.12 | 31.68 |
CDY06757 | Canola | nucleus, plastid | 27.87 | 31.41 |
CDY23653 | Canola | nucleus | 27.38 | 31.37 |
CDY17037 | Canola | nucleus, plastid | 27.87 | 31.32 |
CDY66770 | Canola | nucleus | 27.63 | 31.22 |
CDY22369 | Canola | nucleus | 26.65 | 31.05 |
CDY47595 | Canola | nucleus, plastid | 27.87 | 30.73 |
CDX88368 | Canola | plastid | 28.36 | 30.53 |
CDX87520 | Canola | nucleus | 28.12 | 29.79 |
CDY41784 | Canola | plastid | 24.69 | 29.71 |
CDY62408 | Canola | nucleus, plasma membrane, plastid | 15.16 | 29.38 |
CDY53304 | Canola | plastid | 29.34 | 29.34 |
CDY61993 | Canola | nucleus | 26.65 | 28.91 |
CDY48212 | Canola | nucleus | 26.41 | 28.65 |
CDX85466 | Canola | plastid | 28.85 | 27.96 |
CDX97090 | Canola | nucleus | 29.58 | 27.75 |
CDX81722 | Canola | nucleus, plastid | 27.14 | 27.54 |
CDY02719 | Canola | plastid | 28.85 | 27.51 |
CDX69768 | Canola | nucleus, plastid | 29.34 | 27.46 |
CDY36574 | Canola | mitochondrion, nucleus | 29.1 | 27.29 |
CDX79389 | Canola | plastid | 28.61 | 27.02 |
CDX67944 | Canola | plastid | 28.36 | 26.85 |
CDX96836 | Canola | nucleus, plastid | 28.85 | 26.82 |
CDX92090 | Canola | mitochondrion, nucleus | 23.23 | 26.61 |
CDY66415 | Canola | nucleus | 28.12 | 26.5 |
CDX87087 | Canola | plastid | 26.89 | 26.38 |
CDY38664 | Canola | nucleus, plastid | 28.61 | 25.71 |
CDY65994 | Canola | plastid | 27.38 | 25.28 |
CDY39984 | Canola | plastid | 27.63 | 25.22 |
CDY37592 | Canola | mitochondrion, plastid | 27.87 | 24.95 |
CDY25649 | Canola | plastid | 26.65 | 24.94 |
CDY33338 | Canola | nucleus | 34.72 | 24.32 |
CDX87305 | Canola | plastid | 27.38 | 24.24 |
CDY14091 | Canola | plastid | 36.92 | 23.02 |
CDY35083 | Canola | cytosol, endoplasmic reticulum, nucleus | 33.99 | 22.82 |
CDX96819 | Canola | nucleus | 33.99 | 21.55 |
CDX83953 | Canola | nucleus | 34.23 | 21.37 |
CDY04980 | Canola | nucleus | 36.67 | 20.89 |
CDY19803 | Canola | golgi, nucleus, plasma membrane, plastid | 27.14 | 11.22 |
Protein Annotations
Gene3D:1.10.472.10 | MapMan:13.1.1.1.2 | GO:A0A078GYN2 | UniProt:A0A078GYN2 | EnsemblPlants:CDY30357 | ProteinID:CDY30357 |
ProteinID:CDY30357.1 | InterPro:Cyclin-like | InterPro:Cyclin-like_sf | InterPro:Cyclin_C-dom | InterPro:Cyclin_N | GO:GO:0005575 |
GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | EnsemblPlantsGene:GSBRNA2T00045041001 | PFAM:PF00134 | PFAM:PF02984 |
PIRSF:PIRSF001771 | ScanProsite:PS00292 | PANTHER:PTHR10177 | PANTHER:PTHR10177:SF336 | SMART:SM00385 | SMART:SM01332 |
SUPFAM:SSF47954 | UniParc:UPI0004EF1D28 | SEG:seg | : | : | : |
Description
BnaA09g09200DBnaA09g09200D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GYN2]
Coordinates
chrLK032252:-:426838..428771
Molecular Weight (calculated)
46919.5 Da
IEP (calculated)
4.722
GRAVY (calculated)
-0.229
Length
409 amino acids
Sequence
(BLAST)
(BLAST)
001: MVNSCENNIV VEATTTSILQ DETTSRKFGQ EMKREKRRVL GVINQNVVGA RGVVNKRGNL SKSRVEEPLY HQEDAKKLKT SVPSENYFGD SIFIDDEEEE
101: EEATLDHTMP MSLEKPYTEA DPMEEVEMED VIVEEEPILD IDLSDAKNSL AAVEYVQDLY SFYRTMERFS CVPVDYMMQQ MDLNEKMRAI LIDWLIEVHD
201: KFDLMKETLF LTVNLIDRFL SKKAVMRKKL QLVGLVALLL ACKYEEVSVP VVEDLVLISD KAYTRNDVLD MEKTMLSTLQ FNVSLPTQYP FLKRFLKAAQ
301: ADKKCEMLAS FLIELALVEY EMLQFQPSLL AATAVYTAQC TVGGFRQWSS TCEFHSHYSE DQLIECCRKM VSLHQRAPTG KLTGVYRKYN TSKFGYIAKC
401: EAAHFLVSA
101: EEATLDHTMP MSLEKPYTEA DPMEEVEMED VIVEEEPILD IDLSDAKNSL AAVEYVQDLY SFYRTMERFS CVPVDYMMQQ MDLNEKMRAI LIDWLIEVHD
201: KFDLMKETLF LTVNLIDRFL SKKAVMRKKL QLVGLVALLL ACKYEEVSVP VVEDLVLISD KAYTRNDVLD MEKTMLSTLQ FNVSLPTQYP FLKRFLKAAQ
301: ADKKCEMLAS FLIELALVEY EMLQFQPSLL AATAVYTAQC TVGGFRQWSS TCEFHSHYSE DQLIECCRKM VSLHQRAPTG KLTGVYRKYN TSKFGYIAKC
401: EAAHFLVSA
001: MVNSCENKIF VKPTSTTILQ DETRSRKFGQ EMKREKRRVL RVINQNLAGA RVYPCVVNKR GSLLSNKQEE EEGCQKKKFD SLRPSVTRSG VEEETNKKLK
101: PSVPSANDFG DCIFIDEEEA TLDLPMPMSL EKPYIEADPM EEVEMEDVTV EEPIVDIDVL DSKNSLAAVE YVQDLYAFYR TMERFSCVPV DYMMQQIDLN
201: EKMRAILIDW LIEVHDKFDL INETLFLTVN LIDRFLSKQN VMRKKLQLVG LVALLLACKY EEVSVPVVED LVLISDKAYT RNDVLEMEKT MLSTLQFNIS
301: LPTQYPFLKR FLKAAQADKK CEVLASFLIE LALVEYEMLR FPPSLLAATS VYTAQCTLDG SRKWNSTCEF HCHYSEDQLM ECSRKLVSLH QRAATGNLTG
401: VYRKYSTSKF GYIAKCEAAH FLVSESHHS
101: PSVPSANDFG DCIFIDEEEA TLDLPMPMSL EKPYIEADPM EEVEMEDVTV EEPIVDIDVL DSKNSLAAVE YVQDLYAFYR TMERFSCVPV DYMMQQIDLN
201: EKMRAILIDW LIEVHDKFDL INETLFLTVN LIDRFLSKQN VMRKKLQLVG LVALLLACKY EEVSVPVVED LVLISDKAYT RNDVLEMEKT MLSTLQFNIS
301: LPTQYPFLKR FLKAAQADKK CEVLASFLIE LALVEYEMLR FPPSLLAATS VYTAQCTLDG SRKWNSTCEF HCHYSEDQLM ECSRKLVSLH QRAATGNLTG
401: VYRKYSTSKF GYIAKCEAAH FLVSESHHS
Arabidopsis Description
CYCB2-1Cyclin-B2-1 [Source:UniProtKB/Swiss-Prot;Acc:Q39068]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.