Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES12664 | Sorghum | nucleus | 90.14 | 88.89 |
| Zm00001d002662_P010 | Maize | nucleus | 88.5 | 82.86 |
| TraesCS2A01G404800.1 | Wheat | nucleus | 70.42 | 74.07 |
| TraesCS2B01G422800.1 | Wheat | nucleus | 70.42 | 73.35 |
| Os04t0563700-01 | Rice | mitochondrion | 71.83 | 72.86 |
| TraesCS2D01G401700.1 | Wheat | nucleus, plastid | 70.42 | 71.26 |
| PGSC0003DMT400075380 | Potato | nucleus | 37.79 | 67.93 |
| CDY31481 | Canola | nucleus | 34.04 | 66.82 |
| GSMUA_Achr5P19270_001 | Banana | cytosol | 32.86 | 64.52 |
| HORVU2Hr1G096070.2 | Barley | nucleus | 67.84 | 61.36 |
| GSMUA_Achr8P13320_001 | Banana | nucleus | 55.4 | 56.19 |
| GSMUA_Achr11P... | Banana | nucleus | 53.05 | 55.39 |
| GSMUA_Achr5P19110_001 | Banana | nucleus | 53.76 | 54.01 |
| Solyc04g082430.2.1 | Tomato | nucleus | 49.06 | 53.18 |
| KRH28901 | Soybean | nucleus | 53.52 | 52.66 |
| KRH76553 | Soybean | nucleus | 53.29 | 52.55 |
| VIT_18s0001g14170.t01 | Wine grape | nucleus | 53.99 | 52.15 |
| Zm00001d036360_P002 | Maize | nucleus | 51.88 | 52.12 |
| CDY33634 | Canola | nucleus | 49.53 | 51.72 |
| Bra016460.1-P | Field mustard | nucleus | 49.77 | 51.71 |
| CDX72551 | Canola | nucleus | 48.59 | 51.62 |
| CDX96631 | Canola | nucleus | 49.53 | 51.46 |
| Bra003727.1-P | Field mustard | nucleus | 46.01 | 51.17 |
| VIT_03s0038g02800.t01 | Wine grape | nucleus, plastid | 50.7 | 50.94 |
| CDY67210 | Canola | nucleus | 48.36 | 50.74 |
| CDX85942 | Canola | nucleus | 48.59 | 50.74 |
| PGSC0003DMT400048062 | Potato | nucleus | 51.17 | 50.58 |
| Solyc03g032190.2.1 | Tomato | nucleus | 51.17 | 50.58 |
| Bra017726.1-P | Field mustard | nucleus | 48.12 | 50.49 |
| Zm00001d019469_P001 | Maize | extracellular | 16.9 | 50.35 |
| PGSC0003DMT400093973 | Potato | nucleus | 38.97 | 50.3 |
| AT1G20610.1 | Thale cress | nucleus | 50.47 | 50.12 |
| PGSC0003DMT400025854 | Potato | nucleus | 51.88 | 50.11 |
| CDY07838 | Canola | nucleus | 49.06 | 50.0 |
| AT4G35620.1 | Thale cress | nucleus | 50.23 | 49.88 |
| Solyc12g094600.1.1 | Tomato | nucleus | 49.77 | 49.88 |
| Bra024504.1-P | Field mustard | nucleus | 49.06 | 49.88 |
| CDY29184 | Canola | nucleus | 49.06 | 49.88 |
| Solyc02g061650.1.1 | Tomato | nucleus | 41.08 | 49.86 |
| CDY26816 | Canola | nucleus | 47.42 | 49.63 |
| CDX68105 | Canola | nucleus | 46.01 | 49.62 |
| Bra025831.1-P | Field mustard | nucleus | 47.65 | 49.51 |
| PGSC0003DMT400003868 | Potato | nucleus | 50.23 | 49.42 |
| KRH60628 | Soybean | nucleus | 46.95 | 49.38 |
| Solyc02g082820.2.1 | Tomato | nucleus | 49.77 | 48.85 |
| Bra015762.1-P | Field mustard | nucleus | 49.3 | 48.72 |
| AT1G20590.1 | Thale cress | cytosol, golgi, nucleus, plastid | 30.28 | 48.68 |
| KRH51329 | Soybean | nucleus, plastid | 47.42 | 48.67 |
| CDY30357 | Canola | nucleus | 46.71 | 48.66 |
| CDY29520 | Canola | nucleus | 46.71 | 48.54 |
| CDX87612 | Canola | nucleus | 49.06 | 48.49 |
| Bra037265.1-P | Field mustard | nucleus | 46.48 | 48.41 |
| CDX88261 | Canola | nucleus | 48.83 | 48.37 |
| AT2G17620.1 | Thale cress | nucleus | 48.59 | 48.25 |
| AT1G76310.3 | Thale cress | nucleus | 51.64 | 47.93 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, vacuole | 55.16 | 35.18 |
| Zm00001d012560_P002 | Maize | nucleus, plastid | 34.51 | 32.74 |
| Zm00001d008221_P001 | Maize | nucleus | 35.92 | 31.94 |
| Zm00001d010656_P001 | Maize | nucleus | 31.92 | 30.49 |
| Zm00001d043164_P002 | Maize | nucleus | 34.27 | 30.17 |
| Zm00001d020033_P001 | Maize | nucleus | 35.21 | 27.57 |
| Zm00001d020996_P001 | Maize | nucleus | 34.51 | 27.02 |
| Zm00001d033365_P002 | Maize | nucleus | 23.0 | 26.34 |
| Zm00001d013744_P001 | Maize | nucleus | 21.13 | 25.21 |
| Zm00001d032128_P001 | Maize | cytosol | 9.15 | 24.68 |
| Zm00001d014756_P006 | Maize | nucleus, plastid | 29.11 | 23.8 |
| Zm00001d030849_P001 | Maize | nucleus | 22.77 | 22.93 |
| Zm00001d041334_P001 | Maize | nucleus, plastid | 22.77 | 22.2 |
| Zm00001d023732_P002 | Maize | mitochondrion, nucleus, plastid | 24.88 | 21.86 |
| Zm00001d021353_P002 | Maize | mitochondrion, nucleus | 9.86 | 21.0 |
| Zm00001d010404_P001 | Maize | nucleus | 23.71 | 20.82 |
| Zm00001d040381_P001 | Maize | plastid | 25.82 | 20.64 |
| Zm00001d009011_P001 | Maize | nucleus, plastid | 21.6 | 18.04 |
| Zm00001d048127_P001 | Maize | plastid | 19.95 | 17.75 |
Protein Annotations
| Gene3D:1.10.472.10 | EntrezGene:100272768 | MapMan:13.1.1.1.2 | ProteinID:AQK45693.1 | UniProt:B4FQJ4 | EMBL:BT039382 |
| EMBL:BT067828 | InterPro:Cyclin-like | InterPro:Cyclin-like_sf | InterPro:Cyclin_C-dom | InterPro:Cyclin_N | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | PFAM:PF00134 | PFAM:PF02984 | PIRSF:PIRSF001771 |
| ScanProsite:PS00292 | PANTHER:PTHR10177 | PANTHER:PTHR10177:SF350 | SMART:SM00385 | SMART:SM01332 | SUPFAM:SSF47954 |
| UniParc:UPI00017B8167 | EnsemblPlantsGene:Zm00001d026129 | EnsemblPlants:Zm00001d026129_P001 | EnsemblPlants:Zm00001d026129_T001 | SEG:seg | : |
Description
Cyclin-B2-4
Coordinates
chr10:+:139294768..139298735
Molecular Weight (calculated)
47671.4 Da
IEP (calculated)
4.977
GRAVY (calculated)
-0.300
Length
426 amino acids
Sequence
(BLAST)
(BLAST)
001: MAARAADENR RPGVGRPAPC VRDMGSRRAL TDIKNLVGVA PNPCAVAKKP VLQKSRRDEK KTALPSSRPM TRKFVASLAS KGQPECQPTG ADPEPGVDQR
101: KEPIGDGIID IDVELDEPVD DSDCDVDMGD ETENKDIMNQ DESLMDIDSA DSGNPLAATE YVEELYKFYR ENEAKSCVNP DYMSSQQDIN AKMRAILIDW
201: LIEVHYKFEL MDETLFLTVN VIDRFLEKEV VPRKKLQLVG ITALLLACKY EEVSVPVVED LVLISDRAYT KGQILEMEKL ILNTLQFNMS VPTPYVFMKR
301: FLKAADADKQ LELVSFFMLE LCLVEYQMLN YRPSHLAAAA VYTAQCAINR CQQWTKVCES HSRYTGDQLL ECSRMMVDFH QKAGTGKLTG VHRKYSTYKF
401: GCAAKILPAQ FMLELGGTAP PPSGAI
101: KEPIGDGIID IDVELDEPVD DSDCDVDMGD ETENKDIMNQ DESLMDIDSA DSGNPLAATE YVEELYKFYR ENEAKSCVNP DYMSSQQDIN AKMRAILIDW
201: LIEVHYKFEL MDETLFLTVN VIDRFLEKEV VPRKKLQLVG ITALLLACKY EEVSVPVVED LVLISDRAYT KGQILEMEKL ILNTLQFNMS VPTPYVFMKR
301: FLKAADADKQ LELVSFFMLE LCLVEYQMLN YRPSHLAAAA VYTAQCAINR CQQWTKVCES HSRYTGDQLL ECSRMMVDFH QKAGTGKLTG VHRKYSTYKF
401: GCAAKILPAQ FMLELGGTAP PPSGAI
001: MGGSDENRHG VIGPMNRQQG GLRGGKVIPT NGQTRRALSN INKNIIGAPV YPCAVKRPFT EKNGICNKKI PPVPVHRPVT RKFAAQLAEN NLQIHKEETK
101: KPDLISNEAL DRIITDVEEG DFNEPMFVQH TEAMLEEIDK MEGIEMQDSN DIDAEVEESV MDIDSCDKNN PLSVVEYIND IYCFYKKNEC RSCVPPNYME
201: NQHDINERMR GILFDWLIEV HYKFELMEET LYLTINLIDR FLAVHQHIAR KKLQLVGVTA MLLACKYEEV SVPVVDDLIL ISDKAYTRTE ILDMEKLMAN
301: TLQFNFCLPT PYVFMRRFLK AAQSDKKLEL LSFFMIELCL VEYEMLQYTP SQLAASAIYT AQSTLKGYED WSKTSEFHSG YTEEALLECS RKMVGLHHKA
401: GTGKLTGVHR KYNTSKFGYA ARIEPAGFLL L
101: KPDLISNEAL DRIITDVEEG DFNEPMFVQH TEAMLEEIDK MEGIEMQDSN DIDAEVEESV MDIDSCDKNN PLSVVEYIND IYCFYKKNEC RSCVPPNYME
201: NQHDINERMR GILFDWLIEV HYKFELMEET LYLTINLIDR FLAVHQHIAR KKLQLVGVTA MLLACKYEEV SVPVVDDLIL ISDKAYTRTE ILDMEKLMAN
301: TLQFNFCLPT PYVFMRRFLK AAQSDKKLEL LSFFMIELCL VEYEMLQYTP SQLAASAIYT AQSTLKGYED WSKTSEFHSG YTEEALLECS RKMVGLHHKA
401: GTGKLTGVHR KYNTSKFGYA ARIEPAGFLL L
Arabidopsis Description
CYCB2;4CYCLIN B2;4 [Source:TAIR;Acc:AT1G76310]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.