Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER93483 | Sorghum | nucleus | 93.45 | 93.32 |
| Os03t0740700-01 | Rice | nucleus | 69.59 | 69.96 |
| TraesCS5B01G384000.1 | Wheat | nucleus | 67.63 | 65.57 |
| TraesCS5D01G390200.1 | Wheat | nucleus | 68.28 | 64.96 |
| TraesCS5A01G380400.2 | Wheat | nucleus | 66.84 | 64.48 |
| HORVU5Hr1G094010.1 | Barley | plastid | 65.14 | 56.74 |
| CDY41723 | Canola | nucleus | 42.99 | 48.81 |
| Bra027946.1-P | Field mustard | nucleus | 42.86 | 48.73 |
| CDY53572 | Canola | nucleus | 42.73 | 48.73 |
| GSMUA_Achr3P29250_001 | Banana | nucleus | 51.25 | 48.45 |
| AT1G56290.1 | Thale cress | nucleus | 42.99 | 47.4 |
| VIT_05s0020g04950.t01 | Wine grape | nucleus | 48.1 | 45.31 |
| KRG90984 | Soybean | nucleus | 45.48 | 44.26 |
| KRH35769 | Soybean | nucleus | 45.35 | 44.02 |
| PGSC0003DMT400039096 | Potato | nucleus | 44.04 | 43.41 |
| Solyc09g083420.2.1 | Tomato | nucleus | 43.91 | 43.28 |
| Zm00001d020242_P002 | Maize | plastid | 11.8 | 15.6 |
Protein Annotations
| EnsemblPlants:Zm00001d033954_P001 | EnsemblPlants:Zm00001d033954_T001 | EnsemblPlantsGene:Zm00001d033954 | InterPro:Cwf19-like_C_dom-1 | InterPro:Cwf19-like_C_dom-2 | InterPro:HIT-like_sf |
| InterPro:IPR036265 | ncoils:Coil | PANTHER:PTHR12072 | PANTHER:PTHR12072:SF5 | PFAM:PF04676 | PFAM:PF04677 |
| ProteinID:ONM09038.1 | SEG:seg | SUPFAM:SSF54197 | UniParc:UPI000221A7A3 | UniProt:A0A1D6L3L6 | MapMan:35.1 |
Description
umc106aCwfJ-like family protein
Coordinates
chr1:+:279578119..279582280
Molecular Weight (calculated)
87356.9 Da
IEP (calculated)
9.166
GRAVY (calculated)
-1.170
Length
763 amino acids
Sequence
(BLAST)
(BLAST)
001: MLSGVKLVPR DQIQSDQKRR GDQGSDSDSS DGKRPWKHSK RGRDKKEKKR RSSRRQRRRS KRYSSEDSLG SDTDDSIGEE EEDDVSRSKR RGKDRRRRRN
101: FSDDDDSESG ESDRGRASRR GKQRRDDEDE EEETEGDGLR ASEVVRREMG LEWMLKPASS SQTEGTGVRK VDNVEKDESA HEEIMRPNPK ELNPYLKDNG
201: TGYPEESTPS NAGSQLLASS VVGDGGASWR LKALKRAKEQ AAREGRKLEE VVEERWSSLG DLAVSVSASR AAHSHAHLHA IRGRKSGNAD NSEERVKRNP
301: EGQLDGSSGR REYLRDVSSQ HHAMRKPKPD SVPWKKRRQN ISSEDQALIS SAVASLNKFS DDGSFMEKIS NVESKNTNVS TASASADEQR DNGQKTPKES
401: SNKVQLVSTQ KLNANQMAAK ILQLRMKGKH QEAEQLSREM EALLENQDTA HEKPGHGKER SSIRPTLKPT AADHRRREDD ADLHLANKIM HNKQYNMSKS
501: IEDEYDFGDA PTKKDKRKNK EARDERKSTD RRMLTQKERC MYCFENPSRP KHLVVAIGNF SYLMLPQFEP VVPGHCIILP LQHESGTRTV DQNVWGEIRN
601: FKKCLLKMFA QQDKDVLFME TVISLARQRR HCMIECIPVP CEVSSNAPMY FKKAIDEAEE EWTQHEMKKV IPTSASRNLR QVIPENFAYF HVEFGLDRGF
701: VHVIDDESKF SAGFGLNVIR GMLQLPEEDM HRRRRHESMD NQRQAVASFM KDWEPFDWTK QLD
101: FSDDDDSESG ESDRGRASRR GKQRRDDEDE EEETEGDGLR ASEVVRREMG LEWMLKPASS SQTEGTGVRK VDNVEKDESA HEEIMRPNPK ELNPYLKDNG
201: TGYPEESTPS NAGSQLLASS VVGDGGASWR LKALKRAKEQ AAREGRKLEE VVEERWSSLG DLAVSVSASR AAHSHAHLHA IRGRKSGNAD NSEERVKRNP
301: EGQLDGSSGR REYLRDVSSQ HHAMRKPKPD SVPWKKRRQN ISSEDQALIS SAVASLNKFS DDGSFMEKIS NVESKNTNVS TASASADEQR DNGQKTPKES
401: SNKVQLVSTQ KLNANQMAAK ILQLRMKGKH QEAEQLSREM EALLENQDTA HEKPGHGKER SSIRPTLKPT AADHRRREDD ADLHLANKIM HNKQYNMSKS
501: IEDEYDFGDA PTKKDKRKNK EARDERKSTD RRMLTQKERC MYCFENPSRP KHLVVAIGNF SYLMLPQFEP VVPGHCIILP LQHESGTRTV DQNVWGEIRN
601: FKKCLLKMFA QQDKDVLFME TVISLARQRR HCMIECIPVP CEVSSNAPMY FKKAIDEAEE EWTQHEMKKV IPTSASRNLR QVIPENFAYF HVEFGLDRGF
701: VHVIDDESKF SAGFGLNVIR GMLQLPEEDM HRRRRHESMD NQRQAVASFM KDWEPFDWTK QLD
001: MFSGIKIIPR DEVHDDSWEG EREKSKGGKD RRRKNKDVNR KERRGEGSKR DGKKIAKSGD GETVDDDLLE GDIVRKKMGL DWMLPPTRKA DPNPASDVED
101: KFEESAPEVT KVNPRELNPY LKENGTGYPE EESEKKHGKD QLLPSSVVGD GGASWRMKAL KRAKEQAARE GLRLEEVAGE RYGSLGNLVE SVASQRAAPS
201: RAHLNAINNR RRGENEKNDS EKKPKERISE KGNNREYLKG ESLNHRVLRA PKTDPSLSWG KRKSQTHRNE DSKLISEAAA HMNKFSNDGN FMKEMLSKQK
301: NVSVSPVETR GDHRSDVEQE ALPSETNKDD EGTLPSMENL SVNKLAAKAL QLRMKGKHEE AQKIMEEAER LKAKQAVGDD SSKDHHSIRT AVRYPVKDMS
401: GRRKNEDDTD MHLAKSIMQN KQYKTSNQAA DDEYEYGDAP SKKSRKRESS SNIPEKDNRV KRIMTQQERC LFCFENPKRP KHLVVSIANF TYLMLPQHQP
501: LVQGHCCILP MQHEAASRSV DDNVWDEIRN FKKCLIMMYA KEGKDAVFLE TVIGLSQQRR HCLIECIPIP QEIAKEGPLY FKKAIDEAES EWSQHNAKKL
601: IDTSVKGLRN SIPKNFPYFH VEFGLDKGFV HVIDDEQQFN SNLGLNVIRG MLELPEEDMY RRRRQESVES QKKAVATFAR EWEHFDWTKQ LD
101: KFEESAPEVT KVNPRELNPY LKENGTGYPE EESEKKHGKD QLLPSSVVGD GGASWRMKAL KRAKEQAARE GLRLEEVAGE RYGSLGNLVE SVASQRAAPS
201: RAHLNAINNR RRGENEKNDS EKKPKERISE KGNNREYLKG ESLNHRVLRA PKTDPSLSWG KRKSQTHRNE DSKLISEAAA HMNKFSNDGN FMKEMLSKQK
301: NVSVSPVETR GDHRSDVEQE ALPSETNKDD EGTLPSMENL SVNKLAAKAL QLRMKGKHEE AQKIMEEAER LKAKQAVGDD SSKDHHSIRT AVRYPVKDMS
401: GRRKNEDDTD MHLAKSIMQN KQYKTSNQAA DDEYEYGDAP SKKSRKRESS SNIPEKDNRV KRIMTQQERC LFCFENPKRP KHLVVSIANF TYLMLPQHQP
501: LVQGHCCILP MQHEAASRSV DDNVWDEIRN FKKCLIMMYA KEGKDAVFLE TVIGLSQQRR HCLIECIPIP QEIAKEGPLY FKKAIDEAES EWSQHNAKKL
601: IDTSVKGLRN SIPKNFPYFH VEFGLDKGFV HVIDDEQQFN SNLGLNVIRG MLELPEEDMY RRRRQESVES QKKAVATFAR EWEHFDWTKQ LD
Arabidopsis Description
CwfJ-like family protein [Source:UniProtKB/TrEMBL;Acc:Q93ZX4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.