Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G384000.1 | Wheat | nucleus | 91.53 | 91.99 |
| TraesCS5D01G390200.1 | Wheat | nucleus | 91.91 | 90.65 |
| HORVU5Hr1G094010.1 | Barley | plastid | 84.07 | 75.91 |
| Os03t0740700-01 | Rice | nucleus | 65.99 | 68.77 |
| EER93483 | Sorghum | nucleus | 65.11 | 67.41 |
| Zm00001d033954_P001 | Maize | nucleus | 64.48 | 66.84 |
| CDY41723 | Canola | nucleus | 40.83 | 48.07 |
| Bra027946.1-P | Field mustard | nucleus | 40.71 | 47.99 |
| CDY53572 | Canola | nucleus | 40.46 | 47.83 |
| GSMUA_Achr3P29250_001 | Banana | nucleus | 48.29 | 47.34 |
| AT1G56290.1 | Thale cress | nucleus | 41.34 | 47.25 |
| KRH35769 | Soybean | nucleus | 43.36 | 43.64 |
| KRG90984 | Soybean | nucleus | 43.24 | 43.62 |
| VIT_05s0020g04950.t01 | Wine grape | nucleus | 43.74 | 42.72 |
| PGSC0003DMT400039096 | Potato | nucleus | 41.72 | 42.64 |
| Solyc09g083420.2.1 | Tomato | nucleus | 41.59 | 42.51 |
| TraesCS5A01G192000.1 | Wheat | plastid | 13.02 | 16.94 |
Protein Annotations
| EnsemblPlants:TraesCS5A01G380400.2 | EnsemblPlantsGene:TraesCS5A01G380400 | InterPro:Cwf19-like_C_dom-1 | InterPro:Cwf19-like_C_dom-2 | InterPro:HIT-like_sf | InterPro:IPR036265 |
| ncoils:Coil | PANTHER:PTHR12072 | PANTHER:PTHR12072:SF5 | PFAM:PF04676 | PFAM:PF04677 | SEG:seg |
| SUPFAM:SSF54197 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr5A:+:577938552..577942699
Molecular Weight (calculated)
89520.1 Da
IEP (calculated)
8.740
GRAVY (calculated)
-1.141
Length
791 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLGAKVVPR DKAVLKQGGG DGSGSDGSPG KARTKRGSSK RRDREEKRRR RHRRRSRRRS DSSEEGSDDS VDEEEEKELS RSKHRRKRRR GRRDFSDEDE
101: SSAESDKGRG SGKGKQRGAA SDDDDDDDDD DEDEEEEMGG DGMRAGEVVR KEMGLEWMLK SASSSQPEGS RAQRAENEED KFEATHEEVK KPNPKEMNPY
201: LRDNGSGYPD EATAANAASQ LLASSVVGDG GASWRLKALK RAKEQAAREG RKIEEVVEER WGSLGHLAAS VSTSRVAPSY AHLQAIRGRK AGQGDYSEKS
301: SKVDRKEDQR GEESGGGRQY LQGVSSRDHA MRKPRPDSVP WKKNRQNISS EDQTLISSAL ASINKFSNDG SFMDKISNHG SKNSNVSNVE KRDSDQKAHQ
401: ESSKISSSVS TQKQQESSKI SSSVSTQKQE SSKISSSGST QKLNANQLAA KVLQLRMKGK HEEADQLSRE METVLENQSA SVEEPRHVKE NSSTRHTIKP
501: SAADRRKREE DADLHLANKI MHNKQYNMSK SVEDEYEYGD APTKKGKRTR EAHQENRGTQ RHILTQKERC LYCFENPSRP KHLVIAIGNF TYLMLPQFEP
601: LVPGHCVILP LQHESSTRTV DKNVWEEIRN FKKCLLKMFA QQDKDVVFME TVISLVKQQR HCMIECIPVP CEVSNKAPMY FKKAIDEVEE EWSQHEMKKL
701: IPTTGNLRQV IPENFAYFHV EFGLDRGFVH VIDDESKFGA GFGLNVLRGV LRLPGEDMHR RRRHESMDNQ KQAVASFMKD WEPFDWTKQL E
101: SSAESDKGRG SGKGKQRGAA SDDDDDDDDD DEDEEEEMGG DGMRAGEVVR KEMGLEWMLK SASSSQPEGS RAQRAENEED KFEATHEEVK KPNPKEMNPY
201: LRDNGSGYPD EATAANAASQ LLASSVVGDG GASWRLKALK RAKEQAAREG RKIEEVVEER WGSLGHLAAS VSTSRVAPSY AHLQAIRGRK AGQGDYSEKS
301: SKVDRKEDQR GEESGGGRQY LQGVSSRDHA MRKPRPDSVP WKKNRQNISS EDQTLISSAL ASINKFSNDG SFMDKISNHG SKNSNVSNVE KRDSDQKAHQ
401: ESSKISSSVS TQKQQESSKI SSSVSTQKQE SSKISSSGST QKLNANQLAA KVLQLRMKGK HEEADQLSRE METVLENQSA SVEEPRHVKE NSSTRHTIKP
501: SAADRRKREE DADLHLANKI MHNKQYNMSK SVEDEYEYGD APTKKGKRTR EAHQENRGTQ RHILTQKERC LYCFENPSRP KHLVIAIGNF TYLMLPQFEP
601: LVPGHCVILP LQHESSTRTV DKNVWEEIRN FKKCLLKMFA QQDKDVVFME TVISLVKQQR HCMIECIPVP CEVSNKAPMY FKKAIDEVEE EWSQHEMKKL
701: IPTTGNLRQV IPENFAYFHV EFGLDRGFVH VIDDESKFGA GFGLNVLRGV LRLPGEDMHR RRRHESMDNQ KQAVASFMKD WEPFDWTKQL E
001: MFSGIKIIPR DEVHDDSWEG EREKSKGGKD RRRKNKDVNR KERRGEGSKR DGKKIAKSGD GETVDDDLLE GDIVRKKMGL DWMLPPTRKA DPNPASDVED
101: KFEESAPEVT KVNPRELNPY LKENGTGYPE EESEKKHGKD QLLPSSVVGD GGASWRMKAL KRAKEQAARE GLRLEEVAGE RYGSLGNLVE SVASQRAAPS
201: RAHLNAINNR RRGENEKNDS EKKPKERISE KGNNREYLKG ESLNHRVLRA PKTDPSLSWG KRKSQTHRNE DSKLISEAAA HMNKFSNDGN FMKEMLSKQK
301: NVSVSPVETR GDHRSDVEQE ALPSETNKDD EGTLPSMENL SVNKLAAKAL QLRMKGKHEE AQKIMEEAER LKAKQAVGDD SSKDHHSIRT AVRYPVKDMS
401: GRRKNEDDTD MHLAKSIMQN KQYKTSNQAA DDEYEYGDAP SKKSRKRESS SNIPEKDNRV KRIMTQQERC LFCFENPKRP KHLVVSIANF TYLMLPQHQP
501: LVQGHCCILP MQHEAASRSV DDNVWDEIRN FKKCLIMMYA KEGKDAVFLE TVIGLSQQRR HCLIECIPIP QEIAKEGPLY FKKAIDEAES EWSQHNAKKL
601: IDTSVKGLRN SIPKNFPYFH VEFGLDKGFV HVIDDEQQFN SNLGLNVIRG MLELPEEDMY RRRRQESVES QKKAVATFAR EWEHFDWTKQ LD
101: KFEESAPEVT KVNPRELNPY LKENGTGYPE EESEKKHGKD QLLPSSVVGD GGASWRMKAL KRAKEQAARE GLRLEEVAGE RYGSLGNLVE SVASQRAAPS
201: RAHLNAINNR RRGENEKNDS EKKPKERISE KGNNREYLKG ESLNHRVLRA PKTDPSLSWG KRKSQTHRNE DSKLISEAAA HMNKFSNDGN FMKEMLSKQK
301: NVSVSPVETR GDHRSDVEQE ALPSETNKDD EGTLPSMENL SVNKLAAKAL QLRMKGKHEE AQKIMEEAER LKAKQAVGDD SSKDHHSIRT AVRYPVKDMS
401: GRRKNEDDTD MHLAKSIMQN KQYKTSNQAA DDEYEYGDAP SKKSRKRESS SNIPEKDNRV KRIMTQQERC LFCFENPKRP KHLVVSIANF TYLMLPQHQP
501: LVQGHCCILP MQHEAASRSV DDNVWDEIRN FKKCLIMMYA KEGKDAVFLE TVIGLSQQRR HCLIECIPIP QEIAKEGPLY FKKAIDEAES EWSQHNAKKL
601: IDTSVKGLRN SIPKNFPYFH VEFGLDKGFV HVIDDEQQFN SNLGLNVIRG MLELPEEDMY RRRRQESVES QKKAVATFAR EWEHFDWTKQ LD
Arabidopsis Description
CwfJ-like family protein [Source:UniProtKB/TrEMBL;Acc:Q93ZX4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.