Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 3
- nucleus 3
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G380400.2 | Wheat | nucleus | 91.99 | 91.53 |
| TraesCS5D01G390200.1 | Wheat | nucleus | 93.27 | 91.52 |
| HORVU5Hr1G094010.1 | Barley | plastid | 87.17 | 78.31 |
| Os03t0740700-01 | Rice | nucleus | 66.45 | 68.91 |
| EER93483 | Sorghum | nucleus | 65.95 | 67.93 |
| Zm00001d033954_P001 | Maize | nucleus | 65.57 | 67.63 |
| CDY53572 | Canola | nucleus | 40.79 | 47.98 |
| CDY41723 | Canola | nucleus | 40.91 | 47.92 |
| Bra027946.1-P | Field mustard | nucleus | 40.79 | 47.84 |
| GSMUA_Achr3P29250_001 | Banana | nucleus | 48.92 | 47.71 |
| AT1G56290.1 | Thale cress | nucleus | 41.3 | 46.97 |
| KRH35769 | Soybean | nucleus | 42.95 | 43.0 |
| KRG90984 | Soybean | nucleus | 42.82 | 42.98 |
| VIT_05s0020g04950.t01 | Wine grape | nucleus | 44.22 | 42.96 |
| PGSC0003DMT400039096 | Potato | nucleus | 42.19 | 42.89 |
| Solyc09g083420.2.1 | Tomato | nucleus | 42.19 | 42.89 |
| TraesCS5B01G191100.1 | Wheat | plastid | 13.47 | 17.43 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G384000.1 | EnsemblPlantsGene:TraesCS5B01G384000 | Gene3D:3.30.428.10 | InterPro:Cwf19-like_C_dom-1 | InterPro:Cwf19-like_C_dom-2 | InterPro:HIT-like_sf |
| InterPro:IPR036265 | ncoils:Coil | PANTHER:PTHR12072 | PANTHER:PTHR12072:SF5 | PFAM:PF04676 | PFAM:PF04677 |
| SEG:seg | SUPFAM:SSF54197 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr5B:+:562957004..562961634
Molecular Weight (calculated)
88930.7 Da
IEP (calculated)
9.418
GRAVY (calculated)
-1.108
Length
787 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLGAKVVPR DKAVLKPGSG DGSGSDGSAG KARSRRGSKR RDKEEKRRRR HRRRSRRRSD SSEEEGSDDS VDEEEEKELS RSKRRRKQRR RGRRDFSDED
101: DSSAESDKGR GSGKGKRGGA ASDDDDDEDE EEEIGGDGMR ASEVVRKEMG LEWMLKSASS SQPEGSRAQR AENEEDKFEA THEEVKKPNP KEMNPYLRDN
201: GSGYPDEATA ANAASQLLAS SVVGDGGASW RLKALKRAKE QAAREGRKIE EVVEERWGSL GHLAASVSTS RVAPSYAHLQ AIRGRKAGQG DYSEKSSKVD
301: RKEDQRGEES GGGRQYLQGV SSRDHAMRKP RPDSVPWKKN RQNISSEDQT LISSALASIN KFSNDGSFMD KISNHGSKNT NVSNVEKRDS DQKAHQESSK
401: ISSSVSTQKQ QESSKISSSV STQKQESSKI SSSGSTQKLN ANQLAAKVLQ LRMKGKHEEA DQLSREMETV LENQSASVEE PRHVKENSST RHTIKPSAAD
501: RRKREEDADL HLANKIMHNK LYTMSKSVED EYEYGDAPTK KGKRTREAHQ ENRGTQRHIL TQKERCLYCF ENPSRPKHLV IAIGNFTYLM LPQFEPLVPG
601: HCVILPLQHE SSTRTVDKNV WEEIRNFKKC LLKMFAQQDK DVVFMETVIN LVKQQRHCMI ECIPVPCEVS NKAPMYFKKA IDEVEEEWSQ HEMKKLIPTS
701: GNLRQVIPEN FAYFHVEFGL DRGFVHVIDD ESKFGAGFGL NVLRGVLRLP GEDMHRRRRH ESMDNQKQAV AGFMKGWEPF DWTKQLE
101: DSSAESDKGR GSGKGKRGGA ASDDDDDEDE EEEIGGDGMR ASEVVRKEMG LEWMLKSASS SQPEGSRAQR AENEEDKFEA THEEVKKPNP KEMNPYLRDN
201: GSGYPDEATA ANAASQLLAS SVVGDGGASW RLKALKRAKE QAAREGRKIE EVVEERWGSL GHLAASVSTS RVAPSYAHLQ AIRGRKAGQG DYSEKSSKVD
301: RKEDQRGEES GGGRQYLQGV SSRDHAMRKP RPDSVPWKKN RQNISSEDQT LISSALASIN KFSNDGSFMD KISNHGSKNT NVSNVEKRDS DQKAHQESSK
401: ISSSVSTQKQ QESSKISSSV STQKQESSKI SSSGSTQKLN ANQLAAKVLQ LRMKGKHEEA DQLSREMETV LENQSASVEE PRHVKENSST RHTIKPSAAD
501: RRKREEDADL HLANKIMHNK LYTMSKSVED EYEYGDAPTK KGKRTREAHQ ENRGTQRHIL TQKERCLYCF ENPSRPKHLV IAIGNFTYLM LPQFEPLVPG
601: HCVILPLQHE SSTRTVDKNV WEEIRNFKKC LLKMFAQQDK DVVFMETVIN LVKQQRHCMI ECIPVPCEVS NKAPMYFKKA IDEVEEEWSQ HEMKKLIPTS
701: GNLRQVIPEN FAYFHVEFGL DRGFVHVIDD ESKFGAGFGL NVLRGVLRLP GEDMHRRRRH ESMDNQKQAV AGFMKGWEPF DWTKQLE
001: MFSGIKIIPR DEVHDDSWEG EREKSKGGKD RRRKNKDVNR KERRGEGSKR DGKKIAKSGD GETVDDDLLE GDIVRKKMGL DWMLPPTRKA DPNPASDVED
101: KFEESAPEVT KVNPRELNPY LKENGTGYPE EESEKKHGKD QLLPSSVVGD GGASWRMKAL KRAKEQAARE GLRLEEVAGE RYGSLGNLVE SVASQRAAPS
201: RAHLNAINNR RRGENEKNDS EKKPKERISE KGNNREYLKG ESLNHRVLRA PKTDPSLSWG KRKSQTHRNE DSKLISEAAA HMNKFSNDGN FMKEMLSKQK
301: NVSVSPVETR GDHRSDVEQE ALPSETNKDD EGTLPSMENL SVNKLAAKAL QLRMKGKHEE AQKIMEEAER LKAKQAVGDD SSKDHHSIRT AVRYPVKDMS
401: GRRKNEDDTD MHLAKSIMQN KQYKTSNQAA DDEYEYGDAP SKKSRKRESS SNIPEKDNRV KRIMTQQERC LFCFENPKRP KHLVVSIANF TYLMLPQHQP
501: LVQGHCCILP MQHEAASRSV DDNVWDEIRN FKKCLIMMYA KEGKDAVFLE TVIGLSQQRR HCLIECIPIP QEIAKEGPLY FKKAIDEAES EWSQHNAKKL
601: IDTSVKGLRN SIPKNFPYFH VEFGLDKGFV HVIDDEQQFN SNLGLNVIRG MLELPEEDMY RRRRQESVES QKKAVATFAR EWEHFDWTKQ LD
101: KFEESAPEVT KVNPRELNPY LKENGTGYPE EESEKKHGKD QLLPSSVVGD GGASWRMKAL KRAKEQAARE GLRLEEVAGE RYGSLGNLVE SVASQRAAPS
201: RAHLNAINNR RRGENEKNDS EKKPKERISE KGNNREYLKG ESLNHRVLRA PKTDPSLSWG KRKSQTHRNE DSKLISEAAA HMNKFSNDGN FMKEMLSKQK
301: NVSVSPVETR GDHRSDVEQE ALPSETNKDD EGTLPSMENL SVNKLAAKAL QLRMKGKHEE AQKIMEEAER LKAKQAVGDD SSKDHHSIRT AVRYPVKDMS
401: GRRKNEDDTD MHLAKSIMQN KQYKTSNQAA DDEYEYGDAP SKKSRKRESS SNIPEKDNRV KRIMTQQERC LFCFENPKRP KHLVVSIANF TYLMLPQHQP
501: LVQGHCCILP MQHEAASRSV DDNVWDEIRN FKKCLIMMYA KEGKDAVFLE TVIGLSQQRR HCLIECIPIP QEIAKEGPLY FKKAIDEAES EWSQHNAKKL
601: IDTSVKGLRN SIPKNFPYFH VEFGLDKGFV HVIDDEQQFN SNLGLNVIRG MLELPEEDMY RRRRQESVES QKKAVATFAR EWEHFDWTKQ LD
Arabidopsis Description
CwfJ-like family protein [Source:UniProtKB/TrEMBL;Acc:Q93ZX4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.