Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G384000.1 | Wheat | nucleus | 91.52 | 93.27 |
| TraesCS5A01G380400.2 | Wheat | nucleus | 90.65 | 91.91 |
| HORVU5Hr1G094010.1 | Barley | plastid | 86.78 | 79.45 |
| EER93483 | Sorghum | nucleus | 65.34 | 68.59 |
| Zm00001d033954_P001 | Maize | nucleus | 64.96 | 68.28 |
| Os03t0740700-01 | Rice | nucleus | 64.09 | 67.72 |
| CDY41723 | Canola | nucleus | 39.9 | 47.62 |
| Bra027946.1-P | Field mustard | nucleus | 39.78 | 47.54 |
| CDY53572 | Canola | nucleus | 39.65 | 47.53 |
| GSMUA_Achr3P29250_001 | Banana | nucleus | 47.63 | 47.34 |
| AT1G56290.1 | Thale cress | nucleus | 40.65 | 47.11 |
| KRH35769 | Soybean | nucleus | 42.77 | 43.64 |
| KRG90984 | Soybean | nucleus | 42.52 | 43.49 |
| VIT_05s0020g04950.t01 | Wine grape | nucleus | 43.52 | 43.09 |
| PGSC0003DMT400039096 | Potato | nucleus | 41.52 | 43.02 |
| Solyc09g083420.2.1 | Tomato | nucleus | 41.52 | 43.02 |
| TraesCS5D01G198900.1 | Wheat | plastid | 12.97 | 17.11 |
Protein Annotations
| EnsemblPlants:TraesCS5D01G390200.1 | EnsemblPlantsGene:TraesCS5D01G390200 | InterPro:Cwf19-like_C_dom-1 | InterPro:Cwf19-like_C_dom-2 | InterPro:HIT-like_sf | InterPro:IPR036265 |
| ncoils:Coil | PANTHER:PTHR12072 | PANTHER:PTHR12072:SF5 | PFAM:PF04676 | PFAM:PF04677 | SEG:seg |
| SUPFAM:SSF54197 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr5D:+:458903108..458907947
Molecular Weight (calculated)
90501.3 Da
IEP (calculated)
9.225
GRAVY (calculated)
-1.133
Length
802 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLGAKVVPR DKAVPKQGGG DGSGSDGSAG KTRTKRSSSK RRDKEEKRRR RHRRRSRRRS DSSEEGSDDS VDEEEEKELS RSKRRRKQRR GGRRDFSDED
101: ESSGESDKGR GSGKGKRGGA ASDDDEDEDE DEEEEEMGGE GLRASEVVRK EMGLEWMLKS ASSSQPEGSR AQRADNEEKF EATHEEVKKP NPKEMNPYLR
201: DNGSGYPDEA TAANAASQLL ASSVVGDGGA SWRLKALKRA KEQAAREGRK IEEVVEERWG SLGHLAASVS TSRVAPSYAH LQAIRGRKAG QGDYSEKSSK
301: VDRKEDQRGE ESGGGRQYLQ GVSSRDHAMR KPRPDAVPWK KRQNISSEDQ TLISSALASI NKFSNDGSFM DKISNHGSKN TNVSNVEKRD SDQKAHQESS
401: KTSSSVSTQK QQESSKISSS VSTQKQESSK ISSSVSTQKQ ESSKISSSGS TQKLNANQLA AKVLQLRMKG KHEEADQLSR EMETLLENQS ASVEEPRHVK
501: ENSSTRHTIK PSAADRRKRE EDADLHLANK IMHNKQYNMS KSVEDEYEYG DAPTKKGKRT REAHQENRGT QRHILTQKER CLYCFENPSR PKHLVIAIGN
601: FTYLMLPQFE PLVPGHCVIL PLQHESSTRT VDKNVWEEIR NFKKCLLKMF AQQDKDVVFM ETVISLVKQQ RHCMIECIPV PCEVSNKAPM YFKKAIDEVE
701: EEWSQHEMKK LIPTSGNLRQ VIPENFAYFH VEFGLDRGFV HVIDDESKFG AGFGLNVLRG VLRLPGEDMH RRRRHESMDN QKQAVAGFMK DWEPFDWTKQ
801: LE
101: ESSGESDKGR GSGKGKRGGA ASDDDEDEDE DEEEEEMGGE GLRASEVVRK EMGLEWMLKS ASSSQPEGSR AQRADNEEKF EATHEEVKKP NPKEMNPYLR
201: DNGSGYPDEA TAANAASQLL ASSVVGDGGA SWRLKALKRA KEQAAREGRK IEEVVEERWG SLGHLAASVS TSRVAPSYAH LQAIRGRKAG QGDYSEKSSK
301: VDRKEDQRGE ESGGGRQYLQ GVSSRDHAMR KPRPDAVPWK KRQNISSEDQ TLISSALASI NKFSNDGSFM DKISNHGSKN TNVSNVEKRD SDQKAHQESS
401: KTSSSVSTQK QQESSKISSS VSTQKQESSK ISSSVSTQKQ ESSKISSSGS TQKLNANQLA AKVLQLRMKG KHEEADQLSR EMETLLENQS ASVEEPRHVK
501: ENSSTRHTIK PSAADRRKRE EDADLHLANK IMHNKQYNMS KSVEDEYEYG DAPTKKGKRT REAHQENRGT QRHILTQKER CLYCFENPSR PKHLVIAIGN
601: FTYLMLPQFE PLVPGHCVIL PLQHESSTRT VDKNVWEEIR NFKKCLLKMF AQQDKDVVFM ETVISLVKQQ RHCMIECIPV PCEVSNKAPM YFKKAIDEVE
701: EEWSQHEMKK LIPTSGNLRQ VIPENFAYFH VEFGLDRGFV HVIDDESKFG AGFGLNVLRG VLRLPGEDMH RRRRHESMDN QKQAVAGFMK DWEPFDWTKQ
801: LE
001: MFSGIKIIPR DEVHDDSWEG EREKSKGGKD RRRKNKDVNR KERRGEGSKR DGKKIAKSGD GETVDDDLLE GDIVRKKMGL DWMLPPTRKA DPNPASDVED
101: KFEESAPEVT KVNPRELNPY LKENGTGYPE EESEKKHGKD QLLPSSVVGD GGASWRMKAL KRAKEQAARE GLRLEEVAGE RYGSLGNLVE SVASQRAAPS
201: RAHLNAINNR RRGENEKNDS EKKPKERISE KGNNREYLKG ESLNHRVLRA PKTDPSLSWG KRKSQTHRNE DSKLISEAAA HMNKFSNDGN FMKEMLSKQK
301: NVSVSPVETR GDHRSDVEQE ALPSETNKDD EGTLPSMENL SVNKLAAKAL QLRMKGKHEE AQKIMEEAER LKAKQAVGDD SSKDHHSIRT AVRYPVKDMS
401: GRRKNEDDTD MHLAKSIMQN KQYKTSNQAA DDEYEYGDAP SKKSRKRESS SNIPEKDNRV KRIMTQQERC LFCFENPKRP KHLVVSIANF TYLMLPQHQP
501: LVQGHCCILP MQHEAASRSV DDNVWDEIRN FKKCLIMMYA KEGKDAVFLE TVIGLSQQRR HCLIECIPIP QEIAKEGPLY FKKAIDEAES EWSQHNAKKL
601: IDTSVKGLRN SIPKNFPYFH VEFGLDKGFV HVIDDEQQFN SNLGLNVIRG MLELPEEDMY RRRRQESVES QKKAVATFAR EWEHFDWTKQ LD
101: KFEESAPEVT KVNPRELNPY LKENGTGYPE EESEKKHGKD QLLPSSVVGD GGASWRMKAL KRAKEQAARE GLRLEEVAGE RYGSLGNLVE SVASQRAAPS
201: RAHLNAINNR RRGENEKNDS EKKPKERISE KGNNREYLKG ESLNHRVLRA PKTDPSLSWG KRKSQTHRNE DSKLISEAAA HMNKFSNDGN FMKEMLSKQK
301: NVSVSPVETR GDHRSDVEQE ALPSETNKDD EGTLPSMENL SVNKLAAKAL QLRMKGKHEE AQKIMEEAER LKAKQAVGDD SSKDHHSIRT AVRYPVKDMS
401: GRRKNEDDTD MHLAKSIMQN KQYKTSNQAA DDEYEYGDAP SKKSRKRESS SNIPEKDNRV KRIMTQQERC LFCFENPKRP KHLVVSIANF TYLMLPQHQP
501: LVQGHCCILP MQHEAASRSV DDNVWDEIRN FKKCLIMMYA KEGKDAVFLE TVIGLSQQRR HCLIECIPIP QEIAKEGPLY FKKAIDEAES EWSQHNAKKL
601: IDTSVKGLRN SIPKNFPYFH VEFGLDKGFV HVIDDEQQFN SNLGLNVIRG MLELPEEDMY RRRRQESVES QKKAVATFAR EWEHFDWTKQ LD
Arabidopsis Description
CwfJ-like family protein [Source:UniProtKB/TrEMBL;Acc:Q93ZX4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.