Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY41723 | Canola | nucleus | 99.85 | 99.7 |
| AT1G56290.1 | Thale cress | nucleus | 78.39 | 76.01 |
| KRH35769 | Soybean | nucleus | 56.04 | 47.84 |
| KRG90984 | Soybean | nucleus | 55.74 | 47.7 |
| VIT_05s0020g04950.t01 | Wine grape | nucleus | 54.84 | 45.43 |
| PGSC0003DMT400039096 | Potato | nucleus | 51.27 | 44.44 |
| Solyc09g083420.2.1 | Tomato | nucleus | 51.12 | 44.32 |
| Os03t0740700-01 | Rice | nucleus | 49.63 | 43.87 |
| Zm00001d033954_P001 | Maize | nucleus | 48.73 | 42.86 |
| GSMUA_Achr3P29250_001 | Banana | nucleus | 50.67 | 42.13 |
| EER93483 | Sorghum | nucleus | 47.69 | 41.88 |
| TraesCS5B01G384000.1 | Wheat | nucleus | 47.84 | 40.79 |
| TraesCS5A01G380400.2 | Wheat | nucleus | 47.99 | 40.71 |
| TraesCS5D01G390200.1 | Wheat | nucleus | 47.54 | 39.78 |
| HORVU5Hr1G094010.1 | Barley | plastid | 46.5 | 35.62 |
| Bra002785.1-P | Field mustard | mitochondrion, plastid | 13.41 | 14.9 |
Protein Annotations
| EnsemblPlants:Bra027946.1 | EnsemblPlants:Bra027946.1-P | EnsemblPlantsGene:Bra027946 | Gene3D:3.30.428.10 | InterPro:Cwf19-like_C_dom-1 | InterPro:Cwf19-like_C_dom-2 |
| InterPro:HIT-like_sf | InterPro:IPR036265 | ncoils:Coil | PANTHER:PTHR12072 | PANTHER:PTHR12072:SF5 | PFAM:PF04676 |
| PFAM:PF04677 | SEG:seg | SUPFAM:SSF54197 | UniParc:UPI00025421C3 | UniProt:M4EGN2 | MapMan:35.1 |
Description
AT1G56290 (E=3e-296) | CwfJ-like family protein
Coordinates
chrA09:-:10044872..10047314
Molecular Weight (calculated)
77227.0 Da
IEP (calculated)
8.590
GRAVY (calculated)
-1.072
Length
671 amino acids
Sequence
(BLAST)
(BLAST)
001: MFSGIKIIPR DEVLDDTSDR EDKKDRRRKN KDVDRKESKR HGKKITNSRD DDDLPDGDIA RRSNGLDFML PPTRKTDPDP ALDVEEKLEE STHEEVIKVN
101: PRELNPYFKG NGTGYPEEES EKRNGKDQLL PTSVVGDGGA SWRMKALRRA KEQAAREGQK LEEVAGERWG SLGNLVESVA SQRAAPSRAH LSAINNRRRE
201: NNGDNDKEKK PERVSEKGYG RDYLKDDSIR HRVLKAPKTD PSLSWGKRKG QTHRHEDSKL ISEAASHLNK FTNDGSFMKQ MLSKQKSESV EPREDHHRNE
301: AEAETKKDVV TALPNIESLS VNQLAAKALQ LRLKGKLEEA QKLTEEAERL KAKQAVGDDS SKEQQHYVRA ARYPIKDMSG KRKKEDDDTD MHLAKSIMHN
401: KQYKTSNQAA DDEYDYGDAP SKKSRKQRES NVPEKDNRVK RIMTQQERCL FCFENPKRPK HLVVSIANFT YLMLPQHQPL VPGHCCILPM QHEAASRSVD
501: DNVWDEIRNF KKCLIMMFAK EGKDAVFLET VIGLSQQRRH CMIECIPIPQ EIAKEGPLYF KKAIDEAESE WSQHNAKKLI DTSVKGLRNS LPKNFPYFHV
601: EFGIDKGFAH VIDDEQEFNS NLGLNVIRGM LELPEEDMYR RRRHESVESQ KKAVVSFARQ WEHFDWTKQL D
101: PRELNPYFKG NGTGYPEEES EKRNGKDQLL PTSVVGDGGA SWRMKALRRA KEQAAREGQK LEEVAGERWG SLGNLVESVA SQRAAPSRAH LSAINNRRRE
201: NNGDNDKEKK PERVSEKGYG RDYLKDDSIR HRVLKAPKTD PSLSWGKRKG QTHRHEDSKL ISEAASHLNK FTNDGSFMKQ MLSKQKSESV EPREDHHRNE
301: AEAETKKDVV TALPNIESLS VNQLAAKALQ LRLKGKLEEA QKLTEEAERL KAKQAVGDDS SKEQQHYVRA ARYPIKDMSG KRKKEDDDTD MHLAKSIMHN
401: KQYKTSNQAA DDEYDYGDAP SKKSRKQRES NVPEKDNRVK RIMTQQERCL FCFENPKRPK HLVVSIANFT YLMLPQHQPL VPGHCCILPM QHEAASRSVD
501: DNVWDEIRNF KKCLIMMFAK EGKDAVFLET VIGLSQQRRH CMIECIPIPQ EIAKEGPLYF KKAIDEAESE WSQHNAKKLI DTSVKGLRNS LPKNFPYFHV
601: EFGIDKGFAH VIDDEQEFNS NLGLNVIRGM LELPEEDMYR RRRHESVESQ KKAVVSFARQ WEHFDWTKQL D
001: MFSGIKIIPR DEVHDDSWEG EREKSKGGKD RRRKNKDVNR KERRGEGSKR DGKKIAKSGD GETVDDDLLE GDIVRKKMGL DWMLPPTRKA DPNPASDVED
101: KFEESAPEVT KVNPRELNPY LKENGTGYPE EESEKKHGKD QLLPSSVVGD GGASWRMKAL KRAKEQAARE GLRLEEVAGE RYGSLGNLVE SVASQRAAPS
201: RAHLNAINNR RRGENEKNDS EKKPKERISE KGNNREYLKG ESLNHRVLRA PKTDPSLSWG KRKSQTHRNE DSKLISEAAA HMNKFSNDGN FMKEMLSKQK
301: NVSVSPVETR GDHRSDVEQE ALPSETNKDD EGTLPSMENL SVNKLAAKAL QLRMKGKHEE AQKIMEEAER LKAKQAVGDD SSKDHHSIRT AVRYPVKDMS
401: GRRKNEDDTD MHLAKSIMQN KQYKTSNQAA DDEYEYGDAP SKKSRKRESS SNIPEKDNRV KRIMTQQERC LFCFENPKRP KHLVVSIANF TYLMLPQHQP
501: LVQGHCCILP MQHEAASRSV DDNVWDEIRN FKKCLIMMYA KEGKDAVFLE TVIGLSQQRR HCLIECIPIP QEIAKEGPLY FKKAIDEAES EWSQHNAKKL
601: IDTSVKGLRN SIPKNFPYFH VEFGLDKGFV HVIDDEQQFN SNLGLNVIRG MLELPEEDMY RRRRQESVES QKKAVATFAR EWEHFDWTKQ LD
101: KFEESAPEVT KVNPRELNPY LKENGTGYPE EESEKKHGKD QLLPSSVVGD GGASWRMKAL KRAKEQAARE GLRLEEVAGE RYGSLGNLVE SVASQRAAPS
201: RAHLNAINNR RRGENEKNDS EKKPKERISE KGNNREYLKG ESLNHRVLRA PKTDPSLSWG KRKSQTHRNE DSKLISEAAA HMNKFSNDGN FMKEMLSKQK
301: NVSVSPVETR GDHRSDVEQE ALPSETNKDD EGTLPSMENL SVNKLAAKAL QLRMKGKHEE AQKIMEEAER LKAKQAVGDD SSKDHHSIRT AVRYPVKDMS
401: GRRKNEDDTD MHLAKSIMQN KQYKTSNQAA DDEYEYGDAP SKKSRKRESS SNIPEKDNRV KRIMTQQERC LFCFENPKRP KHLVVSIANF TYLMLPQHQP
501: LVQGHCCILP MQHEAASRSV DDNVWDEIRN FKKCLIMMYA KEGKDAVFLE TVIGLSQQRR HCLIECIPIP QEIAKEGPLY FKKAIDEAES EWSQHNAKKL
601: IDTSVKGLRN SIPKNFPYFH VEFGLDKGFV HVIDDEQQFN SNLGLNVIRG MLELPEEDMY RRRRQESVES QKKAVATFAR EWEHFDWTKQ LD
Arabidopsis Description
CwfJ-like family protein [Source:UniProtKB/TrEMBL;Acc:Q93ZX4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.