Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 3
- nucleus 1
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY32752 | Canola | mitochondrion | 95.86 | 99.48 |
| AT5G56900.2 | Thale cress | mitochondrion | 87.09 | 88.25 |
| Solyc12g008890.1.1 | Tomato | nucleus | 13.08 | 62.7 |
| VIT_11s0016g02130.t01 | Wine grape | cytosol, extracellular, mitochondrion, plastid | 61.26 | 62.39 |
| KRH19176 | Soybean | mitochondrion | 60.43 | 60.73 |
| PGSC0003DMT400000758 | Potato | cytosol, extracellular, mitochondrion, nucleus | 59.6 | 60.4 |
| KRH02709 | Soybean | nucleus | 52.32 | 58.52 |
| Solyc12g008870.1.1 | Tomato | nucleus | 33.11 | 58.31 |
| Zm00001d020242_P002 | Maize | plastid | 53.81 | 56.33 |
| TraesCS5A01G192000.1 | Wheat | plastid | 55.3 | 54.93 |
| TraesCS5B01G191100.1 | Wheat | plastid | 55.3 | 54.93 |
| TraesCS5D01G198900.1 | Wheat | plastid | 55.13 | 54.77 |
| KXG35490 | Sorghum | plastid | 54.64 | 54.37 |
| GSMUA_Achr8P05530_001 | Banana | cytosol, extracellular, mitochondrion, nucleus | 54.3 | 54.3 |
| Os09t0364000-01 | Rice | plastid | 54.47 | 53.67 |
| HORVU5Hr1G057610.14 | Barley | plastid | 55.13 | 51.55 |
| Solyc05g032650.1.1 | Tomato | extracellular, golgi | 22.19 | 48.03 |
| Bra027946.1-P | Field mustard | nucleus | 14.9 | 13.41 |
Protein Annotations
| MapMan:15.5.16 | Gene3D:3.30.428.10 | Gene3D:4.10.1000.10 | EnsemblPlantsGene:Bra002785 | EnsemblPlants:Bra002785.1 | EnsemblPlants:Bra002785.1-P |
| InterPro:Cwf19-like_C_dom-1 | InterPro:Cwf19-like_C_dom-2 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0046872 | InterPro:HIT-like_sf | InterPro:IPR000571 |
| InterPro:IPR036265 | UniProt:M4CF03 | PFAM:PF04676 | PFAM:PF04677 | PFscan:PS50103 | PANTHER:PTHR12072 |
| PANTHER:PTHR12072:SF4 | SMART:SM00356 | SUPFAM:SSF54197 | SUPFAM:SSF90229 | UniParc:UPI0002544BF3 | InterPro:Znf_CCCH |
| InterPro:Znf_CCCH_sf | SEG:seg | : | : | : | : |
Description
AT5G56900 (E=6e-224) | CwfJ-like family protein / zinc finger (CCCH-type) family protein
Coordinates
chrA10:-:7598116..7601075
Molecular Weight (calculated)
67240.4 Da
IEP (calculated)
6.507
GRAVY (calculated)
-0.407
Length
604 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPRILLCGD PLGRLNQLFK RVQSVSPSDS LPPFLRVLIE SQFFSQVSKS AGPFDALICV GQFFPDSPEL LDDFLDYAQG RAQIPIPTYF TGDYGVSAPK
101: ILSATAKKAE NQGFKMDGLE VCHNLFWLRG SGKFTLHGLS VAYLSGRESS DGQFGKYSQD DVDALRALAD DSGVVDLAKE SDIPAHVSDS SFCDSNVSEL
201: VKEVKPRYHI AGSMGVFYAR EPYLNVDSSH VTRFLGLAQV GNKNKQKFLH ALSPTPTSTM SPSELSAKPP NTTLCPYTLQ EGAAESKKRS NDDASDSQYW
301: RYDVSKRQKN GSDGEKLCFK FVCSGSCPRG ESCHFQHNAE AREQCRRGVC LDLIIKGKCE KGPECSYKHE FQDLSVQRKP RSENANRSKE CWFCLSSPSV
401: ESHLIVSVGE SFYCALPKGS LVDDHILIIP IEHLPNTLAL SPEGESELSR YRNGLRNCYK SQGNDAVFFE LVSKRVSHAN LQVVPVPSSR ARLLPNIFSL
501: AAEKLGFKLV TKKFSDSSEG RKYLQKEYDA ALGLFYVELP DGTVLSHTLE ENEVFPAQFG REVLAGLLKI PDRADWRNCK ISQEEEAKLV EDFKKQFQEF
601: DPFE
101: ILSATAKKAE NQGFKMDGLE VCHNLFWLRG SGKFTLHGLS VAYLSGRESS DGQFGKYSQD DVDALRALAD DSGVVDLAKE SDIPAHVSDS SFCDSNVSEL
201: VKEVKPRYHI AGSMGVFYAR EPYLNVDSSH VTRFLGLAQV GNKNKQKFLH ALSPTPTSTM SPSELSAKPP NTTLCPYTLQ EGAAESKKRS NDDASDSQYW
301: RYDVSKRQKN GSDGEKLCFK FVCSGSCPRG ESCHFQHNAE AREQCRRGVC LDLIIKGKCE KGPECSYKHE FQDLSVQRKP RSENANRSKE CWFCLSSPSV
401: ESHLIVSVGE SFYCALPKGS LVDDHILIIP IEHLPNTLAL SPEGESELSR YRNGLRNCYK SQGNDAVFFE LVSKRVSHAN LQVVPVPSSR ARLLPNIFSL
501: AAEKLGFKLV TKKFSDSSEG RKYLQKEYDA ALGLFYVELP DGTVLSHTLE ENEVFPAQFG REVLAGLLKI PDRADWRNCK ISQEEEAKLV EDFKKQFQEF
601: DPFE
001: MAPRILLCGD PLGRLNQLFK RVQSVSKSAG PFDALICVGQ FFPDSPEILD EFLDYVEGRA QVPIPTYFTG DYGVVAPKIL STTSKKAENQ GFKMDGLEVC
101: HNLFWLRGSG KFSLHGLSVA YLSGRQSSES QFGKYSQDDV DALRALAEEP GGVDLFLTNE WPAGVTNRAA VSDIPVGISD SSCSDSTVSE LVMEVKPRYH
201: IAGSMGVFYA REPYLNAEST HVTRFIGLAQ VGNKNKQKFL HALSPTPTST MSPAELSAKP PKTTLWPYNL QDGAAESKKR PNDSDSDSQY WRYDVPKRQK
301: SGSQGEKLCF KFVCSGSCPR GEDCHFQHNA EAREQCRRGV CLDLIIKGKC EKGPECSYKH EFQDESSIQR KPRSENANRS KECWFCLSSP SVESHLIVSV
401: GESFYCALPK GSLVEDHILI IPIEHLPNTL VLSPEVESEL SRYQNGLRNC YKSQGNDAVF FELVSKRVSH ANLQVVPVPS SRARLLPNIF SLAAEKLGFK
501: LVTKKFNDST DGRKYLQKEY NAALGLFYVE LPDGTVLSHT LEENEVFPAQ FGREVLAGLL KIPDRADWRN CKISQEEEAK LAEDFKKQFQ EFDPCQ
101: HNLFWLRGSG KFSLHGLSVA YLSGRQSSES QFGKYSQDDV DALRALAEEP GGVDLFLTNE WPAGVTNRAA VSDIPVGISD SSCSDSTVSE LVMEVKPRYH
201: IAGSMGVFYA REPYLNAEST HVTRFIGLAQ VGNKNKQKFL HALSPTPTST MSPAELSAKP PKTTLWPYNL QDGAAESKKR PNDSDSDSQY WRYDVPKRQK
301: SGSQGEKLCF KFVCSGSCPR GEDCHFQHNA EAREQCRRGV CLDLIIKGKC EKGPECSYKH EFQDESSIQR KPRSENANRS KECWFCLSSP SVESHLIVSV
401: GESFYCALPK GSLVEDHILI IPIEHLPNTL VLSPEVESEL SRYQNGLRNC YKSQGNDAVF FELVSKRVSH ANLQVVPVPS SRARLLPNIF SLAAEKLGFK
501: LVTKKFNDST DGRKYLQKEY NAALGLFYVE LPDGTVLSHT LEENEVFPAQ FGREVLAGLL KIPDRADWRN CKISQEEEAK LAEDFKKQFQ EFDPCQ
Arabidopsis Description
Zinc finger CCCH domain-containing protein 64 [Source:UniProtKB/Swiss-Prot;Acc:Q84WU9]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.