Factsheet for Zm00001d020242_P002

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	peroxisome, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG35490	Sorghum	plastid	93.93	89.29
Os09t0364000-01	Rice	plastid	82.32	77.49
TraesCS5D01G198900.1	Wheat	plastid	80.76	76.64
TraesCS5B01G191100.1	Wheat	plastid	80.76	76.64
TraesCS5A01G192000.1	Wheat	plastid	80.42	76.32
HORVU5Hr1G057610.14	Barley	plastid	80.76	72.14
GSMUA_Achr8P05530_001	Banana	cytosol, extracellular, mitochondrion, nucleus	65.51	62.58
VIT_11s0016g02130.t01	Wine grape	cytosol, extracellular, mitochondrion, plastid	59.27	57.67
KRH19176	Soybean	mitochondrion	59.27	56.91
PGSC0003DMT400000758	Potato	cytosol, extracellular, mitochondrion, nucleus	58.75	56.88
Solyc12g008870.1.1	Tomato	nucleus	33.45	56.27
CDY32752	Canola	mitochondrion	56.33	55.84
KRH02709	Soybean	nucleus	51.13	54.63
AT5G56900.2	Thale cress	mitochondrion	56.15	54.36
Bra002785.1-P	Field mustard	mitochondrion, plastid	56.33	53.81
CDY32895	Canola	mitochondrion	55.11	53.45
Solyc12g008890.1.1	Tomato	nucleus	10.92	50.0
Solyc05g032650.1.1	Tomato	extracellular, golgi	22.18	45.88
CDY33859	Canola	cytosol	9.36	45.76
CDX80571	Canola	extracellular	13.17	33.33
CDY61116	Canola	cytosol	3.64	17.21
Zm00001d033954_P001	Maize	nucleus	15.6	11.8

Protein Annotations

MapMan:15.5.16	Gene3D:3.30.428.10	Gene3D:4.10.1000.10	UniProt:A0A1D6I370	InterPro:Cwf19-like_C_dom-1	InterPro:Cwf19-like_C_dom-2
GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005829	GO:GO:0046872	InterPro:HIT-like_sf	InterPro:IPR000571	InterPro:IPR036265	ProteinID:ONM54603.1
PFAM:PF04676	PFAM:PF04677	PFscan:PS50103	PANTHER:PTHR12072	PANTHER:PTHR12072:SF4	SMART:SM00356
SUPFAM:SSF54197	UniParc:UPI0008458A0C	EnsemblPlantsGene:Zm00001d020242	EnsemblPlants:Zm00001d020242_P002	EnsemblPlants:Zm00001d020242_T002	InterPro:Znf_CCCH
SEG:seg	:	:	:	:	:

Description

Zinc finger CCCH domain-containing protein 64

Coordinates

chr7:+:101925496..101931975

Molecular Weight (calculated)

63485.5 Da

IEP (calculated)

7.079

GRAVY (calculated)

-0.305

Length

577 amino acids

Sequence
(BLAST)

001: MAATSPAPAP PRILLAGDAH GRLHQLFKRV KSVNQSTGPF HALLCVGQFF SPEGAAEGSP EDVTDYLEGR ASVPIPTYFT GDYGPAAPRL LSKAAAGARG
101: FAPGGIEICP NVFWLRGSNR FTLHGLSVVY LSGRKGLGGP GCYSQDDVDA LRALAEEPGI DDLFLTYPFF PYTVLDPNGY DPIVAELVAE IKPRYHIAGT
201: KGVFYSREPY VNDSAAHVTR FIGLANVGNK EKQKFIHAIS PTPASVMSSA DINAKPPNAT LSPYVGSAKS VPIEEAPKRA AENIDSQYWR YDVKRQRHGE
301: AGGGGLCFKF VSSGSCQRGS RCSYRHDEEA VEHYQRNVCF DFLNKGKCER GPECNERRRV ESSCWFCLSS PDVESHLVIS IGEGYYCTLA KGPLVPNHVL
401: MIPVEHCPST LMMPPEAEAE LGRYKIALSK YFEKQGKTAV YFEWVSPRSH HANLQAVPVP LSKADAVNKI FHLAAKKLGF EFSMVNPDGA KTARESLMSQ
501: CESKSGLFYV ELPEGRILLH MVDSNEKFPV QFGREVLAGL LSMADRADWR NCKISKEEEI KLVDDFKQGF REFDPAE

Best Arabidopsis Sequence Match ( AT5G56900.2 )
(BLAST)

001: MAPRILLCGD PLGRLNQLFK RVQSVSKSAG PFDALICVGQ FFPDSPEILD EFLDYVEGRA QVPIPTYFTG DYGVVAPKIL STTSKKAENQ GFKMDGLEVC
101: HNLFWLRGSG KFSLHGLSVA YLSGRQSSES QFGKYSQDDV DALRALAEEP GGVDLFLTNE WPAGVTNRAA VSDIPVGISD SSCSDSTVSE LVMEVKPRYH
201: IAGSMGVFYA REPYLNAEST HVTRFIGLAQ VGNKNKQKFL HALSPTPTST MSPAELSAKP PKTTLWPYNL QDGAAESKKR PNDSDSDSQY WRYDVPKRQK
301: SGSQGEKLCF KFVCSGSCPR GEDCHFQHNA EAREQCRRGV CLDLIIKGKC EKGPECSYKH EFQDESSIQR KPRSENANRS KECWFCLSSP SVESHLIVSV
401: GESFYCALPK GSLVEDHILI IPIEHLPNTL VLSPEVESEL SRYQNGLRNC YKSQGNDAVF FELVSKRVSH ANLQVVPVPS SRARLLPNIF SLAAEKLGFK
501: LVTKKFNDST DGRKYLQKEY NAALGLFYVE LPDGTVLSHT LEENEVFPAQ FGREVLAGLL KIPDRADWRN CKISQEEEAK LAEDFKKQFQ EFDPCQ

Arabidopsis Description

Zinc finger CCCH domain-containing protein 64 [Source:UniProtKB/Swiss-Prot;Acc:Q84WU9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.