Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 2
- mitochondrion 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY32752 | Canola | mitochondrion | 92.94 | 95.02 |
| AT5G56900.2 | Thale cress | mitochondrion | 90.59 | 90.44 |
| CDY33859 | Canola | cytosol | 17.31 | 87.29 |
| VIT_11s0016g02130.t01 | Wine grape | cytosol, extracellular, mitochondrion, plastid | 62.86 | 63.07 |
| Solyc12g008890.1.1 | Tomato | nucleus | 13.28 | 62.7 |
| KRH19176 | Soybean | mitochondrion | 63.19 | 62.56 |
| PGSC0003DMT400000758 | Potato | cytosol, extracellular, mitochondrion, nucleus | 61.68 | 61.58 |
| KRH02709 | Soybean | nucleus | 54.96 | 60.56 |
| Solyc12g008870.1.1 | Tomato | nucleus | 33.95 | 58.89 |
| TraesCS5B01G191100.1 | Wheat | plastid | 56.47 | 55.26 |
| TraesCS5A01G192000.1 | Wheat | plastid | 56.47 | 55.26 |
| Zm00001d020242_P002 | Maize | plastid | 53.45 | 55.11 |
| TraesCS5D01G198900.1 | Wheat | plastid | 56.3 | 55.1 |
| GSMUA_Achr8P05530_001 | Banana | cytosol, extracellular, mitochondrion, nucleus | 55.8 | 54.97 |
| KXG35490 | Sorghum | plastid | 55.63 | 54.53 |
| Os09t0364000-01 | Rice | plastid | 55.97 | 54.32 |
| HORVU5Hr1G057610.14 | Barley | plastid | 56.3 | 51.86 |
| CDX80571 | Canola | extracellular | 19.33 | 50.44 |
| Solyc05g032650.1.1 | Tomato | extracellular, golgi | 22.52 | 48.03 |
| CDY61116 | Canola | cytosol | 3.03 | 14.75 |
| CDY53572 | Canola | nucleus | 14.96 | 13.3 |
| CDY41723 | Canola | nucleus | 14.96 | 13.24 |
Protein Annotations
| MapMan:15.5.16 | Gene3D:3.30.428.10 | Gene3D:4.10.1000.10 | GO:A0A078H2R1 | UniProt:A0A078H2R1 | EnsemblPlants:CDY32895 |
| ProteinID:CDY32895 | ProteinID:CDY32895.1 | InterPro:Cwf19-like_C_dom-1 | InterPro:Cwf19-like_C_dom-2 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0046872 | EnsemblPlantsGene:GSBRNA2T00053047001 | InterPro:HIT-like_sf | InterPro:IPR000571 | InterPro:IPR036265 | PFAM:PF04676 |
| PFAM:PF04677 | PFscan:PS50103 | PANTHER:PTHR12072 | PANTHER:PTHR12072:SF4 | SMART:SM00356 | SUPFAM:SSF54197 |
| SUPFAM:SSF90229 | UniParc:UPI0004EE4FEB | InterPro:Znf_CCCH | InterPro:Znf_CCCH_sf | SEG:seg | : |
Description
BnaC09g33420DBnaC09g33420D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H2R1]
Coordinates
chrLK032301:-:427240..430717
Molecular Weight (calculated)
66179.2 Da
IEP (calculated)
6.563
GRAVY (calculated)
-0.408
Length
595 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPRILLCGD PLGRLNQLFK RVQSVSKSAG PFDALICVGQ FFPDSPELLD EFMNYVEGRA QVPIPTYFTG DYGVSAPKIL SATSKKTENQ GFKMDGLVVA
101: HNLFWLRGSG KFTLHGLSVA YLSGRESSDG QFGKYSQDDV DALRALADDS GVVDFLFTNE WPAGVTNRAA ESDIPADVSD SSCCDFNVSE LVKEVKPRYH
201: IAGSMGVFYA REPYLNVDSS HVTRFLGLAQ VGNKNKQKFL HALSPTPTSV MSPSELCAKP PNTTLCPYTL QEGAADSKKR SNDDASDSQY WRYDVSKRQK
301: NGSDGEKLCF KFVCSGSCPR GESCHFQHNA EAREQCRRGV CLDLIIKGKC EKGPECSYKH EFQDLSVQRK PRSENANRSK ECWFCLSSPS VESHLIVSVG
401: ESFYCALPKG SLVDDHILII PIEHLPNTLA LSPEGESELS RYQNGLRNCY KSQGNDAVFF ELVSKRVSHA NLQVVPVPSS RARLLPNIFS LAAEKLGFKL
501: VTKKFSDSSE GRKYLQKEYD AALGLFYVEL PDGTVLSHTL EENEVFPAQF GREVLAGLLK IPDRADWRNC KISQEEEAKL AEDFKKRFQE FDPCQ
101: HNLFWLRGSG KFTLHGLSVA YLSGRESSDG QFGKYSQDDV DALRALADDS GVVDFLFTNE WPAGVTNRAA ESDIPADVSD SSCCDFNVSE LVKEVKPRYH
201: IAGSMGVFYA REPYLNVDSS HVTRFLGLAQ VGNKNKQKFL HALSPTPTSV MSPSELCAKP PNTTLCPYTL QEGAADSKKR SNDDASDSQY WRYDVSKRQK
301: NGSDGEKLCF KFVCSGSCPR GESCHFQHNA EAREQCRRGV CLDLIIKGKC EKGPECSYKH EFQDLSVQRK PRSENANRSK ECWFCLSSPS VESHLIVSVG
401: ESFYCALPKG SLVDDHILII PIEHLPNTLA LSPEGESELS RYQNGLRNCY KSQGNDAVFF ELVSKRVSHA NLQVVPVPSS RARLLPNIFS LAAEKLGFKL
501: VTKKFSDSSE GRKYLQKEYD AALGLFYVEL PDGTVLSHTL EENEVFPAQF GREVLAGLLK IPDRADWRNC KISQEEEAKL AEDFKKRFQE FDPCQ
001: MAPRILLCGD PLGRLNQLFK RVQSVSKSAG PFDALICVGQ FFPDSPEILD EFLDYVEGRA QVPIPTYFTG DYGVVAPKIL STTSKKAENQ GFKMDGLEVC
101: HNLFWLRGSG KFSLHGLSVA YLSGRQSSES QFGKYSQDDV DALRALAEEP GGVDLFLTNE WPAGVTNRAA VSDIPVGISD SSCSDSTVSE LVMEVKPRYH
201: IAGSMGVFYA REPYLNAEST HVTRFIGLAQ VGNKNKQKFL HALSPTPTST MSPAELSAKP PKTTLWPYNL QDGAAESKKR PNDSDSDSQY WRYDVPKRQK
301: SGSQGEKLCF KFVCSGSCPR GEDCHFQHNA EAREQCRRGV CLDLIIKGKC EKGPECSYKH EFQDESSIQR KPRSENANRS KECWFCLSSP SVESHLIVSV
401: GESFYCALPK GSLVEDHILI IPIEHLPNTL VLSPEVESEL SRYQNGLRNC YKSQGNDAVF FELVSKRVSH ANLQVVPVPS SRARLLPNIF SLAAEKLGFK
501: LVTKKFNDST DGRKYLQKEY NAALGLFYVE LPDGTVLSHT LEENEVFPAQ FGREVLAGLL KIPDRADWRN CKISQEEEAK LAEDFKKQFQ EFDPCQ
101: HNLFWLRGSG KFSLHGLSVA YLSGRQSSES QFGKYSQDDV DALRALAEEP GGVDLFLTNE WPAGVTNRAA VSDIPVGISD SSCSDSTVSE LVMEVKPRYH
201: IAGSMGVFYA REPYLNAEST HVTRFIGLAQ VGNKNKQKFL HALSPTPTST MSPAELSAKP PKTTLWPYNL QDGAAESKKR PNDSDSDSQY WRYDVPKRQK
301: SGSQGEKLCF KFVCSGSCPR GEDCHFQHNA EAREQCRRGV CLDLIIKGKC EKGPECSYKH EFQDESSIQR KPRSENANRS KECWFCLSSP SVESHLIVSV
401: GESFYCALPK GSLVEDHILI IPIEHLPNTL VLSPEVESEL SRYQNGLRNC YKSQGNDAVF FELVSKRVSH ANLQVVPVPS SRARLLPNIF SLAAEKLGFK
501: LVTKKFNDST DGRKYLQKEY NAALGLFYVE LPDGTVLSHT LEENEVFPAQ FGREVLAGLL KIPDRADWRN CKISQEEEAK LAEDFKKQFQ EFDPCQ
Arabidopsis Description
Zinc finger CCCH domain-containing protein 64 [Source:UniProtKB/Swiss-Prot;Acc:Q84WU9]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.