Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY41723 | Canola | nucleus | 94.47 | 94.05 |
| AT1G56290.1 | Thale cress | nucleus | 78.48 | 75.87 |
| KRH35769 | Soybean | nucleus | 55.46 | 47.2 |
| KRG90984 | Soybean | nucleus | 55.31 | 47.19 |
| VIT_05s0020g04950.t01 | Wine grape | nucleus | 54.26 | 44.81 |
| PGSC0003DMT400039096 | Potato | nucleus | 51.27 | 44.32 |
| Solyc09g083420.2.1 | Tomato | nucleus | 50.97 | 44.06 |
| Os03t0740700-01 | Rice | nucleus | 49.33 | 43.48 |
| Zm00001d033954_P001 | Maize | nucleus | 48.73 | 42.73 |
| EER93483 | Sorghum | nucleus | 47.83 | 41.88 |
| GSMUA_Achr3P29250_001 | Banana | nucleus | 50.37 | 41.76 |
| TraesCS5B01G384000.1 | Wheat | nucleus | 47.98 | 40.79 |
| TraesCS5A01G380400.2 | Wheat | nucleus | 47.83 | 40.46 |
| TraesCS5D01G390200.1 | Wheat | nucleus | 47.53 | 39.65 |
| HORVU5Hr1G094010.1 | Barley | plastid | 46.34 | 35.39 |
| CDY32895 | Canola | mitochondrion | 13.3 | 14.96 |
| CDY32752 | Canola | mitochondrion | 13.0 | 14.95 |
| CDY61116 | Canola | cytosol | 2.54 | 13.93 |
| CDY33859 | Canola | cytosol | 2.24 | 12.71 |
| CDX80571 | Canola | extracellular | 3.74 | 10.96 |
Protein Annotations
| EnsemblPlants:CDY53572 | EnsemblPlantsGene:GSBRNA2T00011006001 | Gene3D:3.30.428.10 | GO:A0A078IUA8 | InterPro:Cwf19-like_C_dom-1 | InterPro:Cwf19-like_C_dom-2 |
| InterPro:HIT-like_sf | InterPro:IPR036265 | ncoils:Coil | PANTHER:PTHR12072 | PANTHER:PTHR12072:SF5 | PFAM:PF04676 |
| PFAM:PF04677 | ProteinID:CDY53572 | ProteinID:CDY53572.1 | SEG:seg | SUPFAM:SSF54197 | UniParc:UPI0004EDBABE |
| UniProt:A0A078IUA8 | MapMan:35.1 | : | : | : | : |
Description
BnaC09g51510DBnaC09g51510D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IUA8]
Coordinates
chrLK033216:-:18847..21829
Molecular Weight (calculated)
76827.6 Da
IEP (calculated)
8.598
GRAVY (calculated)
-1.055
Length
669 amino acids
Sequence
(BLAST)
(BLAST)
001: MFSGIKIIPR HEVLDDTSDR EDKKDRRRKN KDVDRKESKR HGKKIANSGD DDDLPDGDIA RRSNGLDFML PPTRQSDPDP ALDVEDKLEE STHEEVIKVN
101: PRELNPYLKG NGTGYPEEET DKRNGKDQLL PTSVVGDGGA SWRMKALKRA KEHAAREGQK LEEVAGERWG SLGNLVESVA SQRAAPSRAH LNAINNRRRE
201: NSGDNDKEKK PERVSEKGNG RDYLKDDSIR HRVLRAPKTD PSLSWGKRKG QTHRHEDSKL ISEAASHLNK FTNDGSFMKQ MLSKQKSELV EPREDHHHRS
301: DAETKKDVVT SLPNMESLTV NQLAAKALQL RLKGKLEEAQ KLTEEAERLK AKQAVGDDSS KEQHYVRAAR YPIKDMSGKR KKEDDDTDMH LAKSILHNKQ
401: YKTSNQAADD EYDYGEAPSK KSRKQRESNV PEKDNRVKRI MTQQERCLFC FENPKRPKHL VVSIANFTYL MLPQHQPLVP GHCCILPMQH EAASRSVDDN
501: VWDEIRNFKK CLIMMFAKEG KDAVFLETVI GLSQQRRHCM IECIPIPQEI AKEGPLYFKK AIDEAESEWS QHNAKKLIDT SVKGLRNSIP KNFPYFHVEF
601: GIDKGFAHVI DDEQEFNSNL GLNVIRGMLE LPEEDMYRKR RHESVESQKK AVVSFARQWE HFDWTKQLD
101: PRELNPYLKG NGTGYPEEET DKRNGKDQLL PTSVVGDGGA SWRMKALKRA KEHAAREGQK LEEVAGERWG SLGNLVESVA SQRAAPSRAH LNAINNRRRE
201: NSGDNDKEKK PERVSEKGNG RDYLKDDSIR HRVLRAPKTD PSLSWGKRKG QTHRHEDSKL ISEAASHLNK FTNDGSFMKQ MLSKQKSELV EPREDHHHRS
301: DAETKKDVVT SLPNMESLTV NQLAAKALQL RLKGKLEEAQ KLTEEAERLK AKQAVGDDSS KEQHYVRAAR YPIKDMSGKR KKEDDDTDMH LAKSILHNKQ
401: YKTSNQAADD EYDYGEAPSK KSRKQRESNV PEKDNRVKRI MTQQERCLFC FENPKRPKHL VVSIANFTYL MLPQHQPLVP GHCCILPMQH EAASRSVDDN
501: VWDEIRNFKK CLIMMFAKEG KDAVFLETVI GLSQQRRHCM IECIPIPQEI AKEGPLYFKK AIDEAESEWS QHNAKKLIDT SVKGLRNSIP KNFPYFHVEF
601: GIDKGFAHVI DDEQEFNSNL GLNVIRGMLE LPEEDMYRKR RHESVESQKK AVVSFARQWE HFDWTKQLD
001: MFSGIKIIPR DEVHDDSWEG EREKSKGGKD RRRKNKDVNR KERRGEGSKR DGKKIAKSGD GETVDDDLLE GDIVRKKMGL DWMLPPTRKA DPNPASDVED
101: KFEESAPEVT KVNPRELNPY LKENGTGYPE EESEKKHGKD QLLPSSVVGD GGASWRMKAL KRAKEQAARE GLRLEEVAGE RYGSLGNLVE SVASQRAAPS
201: RAHLNAINNR RRGENEKNDS EKKPKERISE KGNNREYLKG ESLNHRVLRA PKTDPSLSWG KRKSQTHRNE DSKLISEAAA HMNKFSNDGN FMKEMLSKQK
301: NVSVSPVETR GDHRSDVEQE ALPSETNKDD EGTLPSMENL SVNKLAAKAL QLRMKGKHEE AQKIMEEAER LKAKQAVGDD SSKDHHSIRT AVRYPVKDMS
401: GRRKNEDDTD MHLAKSIMQN KQYKTSNQAA DDEYEYGDAP SKKSRKRESS SNIPEKDNRV KRIMTQQERC LFCFENPKRP KHLVVSIANF TYLMLPQHQP
501: LVQGHCCILP MQHEAASRSV DDNVWDEIRN FKKCLIMMYA KEGKDAVFLE TVIGLSQQRR HCLIECIPIP QEIAKEGPLY FKKAIDEAES EWSQHNAKKL
601: IDTSVKGLRN SIPKNFPYFH VEFGLDKGFV HVIDDEQQFN SNLGLNVIRG MLELPEEDMY RRRRQESVES QKKAVATFAR EWEHFDWTKQ LD
101: KFEESAPEVT KVNPRELNPY LKENGTGYPE EESEKKHGKD QLLPSSVVGD GGASWRMKAL KRAKEQAARE GLRLEEVAGE RYGSLGNLVE SVASQRAAPS
201: RAHLNAINNR RRGENEKNDS EKKPKERISE KGNNREYLKG ESLNHRVLRA PKTDPSLSWG KRKSQTHRNE DSKLISEAAA HMNKFSNDGN FMKEMLSKQK
301: NVSVSPVETR GDHRSDVEQE ALPSETNKDD EGTLPSMENL SVNKLAAKAL QLRMKGKHEE AQKIMEEAER LKAKQAVGDD SSKDHHSIRT AVRYPVKDMS
401: GRRKNEDDTD MHLAKSIMQN KQYKTSNQAA DDEYEYGDAP SKKSRKRESS SNIPEKDNRV KRIMTQQERC LFCFENPKRP KHLVVSIANF TYLMLPQHQP
501: LVQGHCCILP MQHEAASRSV DDNVWDEIRN FKKCLIMMYA KEGKDAVFLE TVIGLSQQRR HCLIECIPIP QEIAKEGPLY FKKAIDEAES EWSQHNAKKL
601: IDTSVKGLRN SIPKNFPYFH VEFGLDKGFV HVIDDEQQFN SNLGLNVIRG MLELPEEDMY RRRRQESVES QKKAVATFAR EWEHFDWTKQ LD
Arabidopsis Description
CwfJ-like family protein [Source:UniProtKB/TrEMBL;Acc:Q93ZX4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.