Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH35769 | Soybean | nucleus | 91.84 | 91.6 |
| CDY41723 | Canola | nucleus | 47.83 | 55.8 |
| Bra027946.1-P | Field mustard | nucleus | 47.7 | 55.74 |
| CDY53572 | Canola | nucleus | 47.19 | 55.31 |
| VIT_05s0020g04950.t01 | Wine grape | nucleus | 56.51 | 54.69 |
| AT1G56290.1 | Thale cress | nucleus | 47.07 | 53.32 |
| PGSC0003DMT400039096 | Potato | nucleus | 50.77 | 51.42 |
| Solyc09g083420.2.1 | Tomato | nucleus | 50.26 | 50.9 |
| Zm00001d033954_P001 | Maize | nucleus | 44.26 | 45.48 |
| Os03t0740700-01 | Rice | nucleus | 44.01 | 45.45 |
| GSMUA_Achr3P29250_001 | Banana | nucleus | 46.56 | 45.23 |
| EER93483 | Sorghum | nucleus | 43.62 | 44.76 |
| TraesCS5A01G380400.2 | Wheat | nucleus | 43.62 | 43.24 |
| TraesCS5B01G384000.1 | Wheat | nucleus | 42.98 | 42.82 |
| TraesCS5D01G390200.1 | Wheat | nucleus | 43.49 | 42.52 |
| HORVU5Hr1G094010.1 | Barley | plastid | 42.22 | 37.79 |
| KRH19176 | Soybean | mitochondrion | 12.24 | 15.97 |
| KRH02709 | Soybean | nucleus | 10.71 | 15.56 |
Protein Annotations
| EMBL:ACUP02012657 | EnsemblPlants:KRG90984 | EnsemblPlantsGene:GLYMA_20G126100 | EntrezGene:100805594 | Gene3D:3.30.428.10 | GO:GO:0003674 |
| GO:GO:0003824 | InterPro:Cwf19-like_C_dom-1 | InterPro:Cwf19-like_C_dom-2 | InterPro:HIT-like_sf | InterPro:IPR036265 | PANTHER:PTHR12072 |
| PANTHER:PTHR12072:SF5 | PFAM:PF04676 | PFAM:PF04677 | ProteinID:KRG90984 | ProteinID:KRG90984.1 | ProteinID:KRG90985.1 |
| SEG:seg | SUPFAM:SSF54197 | UniParc:UPI000296F9A5 | UniProt:K7N341 | MapMan:35.1 | : |
Description
hypothetical protein
Coordinates
chr20:-:36818612..36823626
Molecular Weight (calculated)
89594.0 Da
IEP (calculated)
9.548
GRAVY (calculated)
-1.093
Length
784 amino acids
Sequence
(BLAST)
(BLAST)
001: MLSGVKFISR DQVHDEDLDS VSKERKKSDR RREKNKRKRR SSRDSSDDDD DGLEKIKKGS RKKKWYSSDE DSLIYTTESE SEKDEKKRRR RAKKKRDDGS
101: SRDSGERSKG RSRSRSGKKE YTSEDEEDSY SSDGSDSFSG LKGKHQKSDR KDGSKRNKIE GGTVNSTSEM EIARKEMGLD WMLRSESKKP VVTESEEKLS
201: EEVPVEESKK ANPKELNPYL KDNGSGYPEE SGAKVGADQL LSSSLVGDGG ASWRLKALKR AQEQAARDGR RFNEVVEERW SSLGELTAAV ASHAAAPARA
301: HLRAIKNRQR GITEENSQDS DKHGRRDSKR QDYLKDVSVR HHEMKAPKVR DSLSWGKRKS QQVVAEGAGV ISAAVSSLNK FANDGSFMHD FGSKMSNNSD
401: GSVLDSSELE KVSLEANRPE ESSAVVKNEM SENQLAAKVM QLRLKGKHEE ADKLMQEAKV MNTKQGNQDH SIRSRTEGSS SRYAMQKISA EQKKGEDDAD
501: MHLARKIMHN KQFRASTQAD DEYDFEDGPS RKSRKKQGGD DHKSIQKKTN RFLTQQERCL FCLENPNRPM HLVVSIANFT YLMLPKWQPV VPGHCCILPI
601: QHESATRTVD DNVWTEIRNF KKCLIMMFAK QEKEVVFLET VMGLAQQRRH CMVECIPLPQ DIAKEAPLYF KKAIDEAEDE WSQHNAKKLI DTSQKGLRNS
701: IPKHFPYFHV EFGLNKGFVH VIDDEKQFNI SLGLNVIRGM LHLAEEDMYR RRRYEAVEVQ KQAVESFSKE WKHFDWTKQL HETS
101: SRDSGERSKG RSRSRSGKKE YTSEDEEDSY SSDGSDSFSG LKGKHQKSDR KDGSKRNKIE GGTVNSTSEM EIARKEMGLD WMLRSESKKP VVTESEEKLS
201: EEVPVEESKK ANPKELNPYL KDNGSGYPEE SGAKVGADQL LSSSLVGDGG ASWRLKALKR AQEQAARDGR RFNEVVEERW SSLGELTAAV ASHAAAPARA
301: HLRAIKNRQR GITEENSQDS DKHGRRDSKR QDYLKDVSVR HHEMKAPKVR DSLSWGKRKS QQVVAEGAGV ISAAVSSLNK FANDGSFMHD FGSKMSNNSD
401: GSVLDSSELE KVSLEANRPE ESSAVVKNEM SENQLAAKVM QLRLKGKHEE ADKLMQEAKV MNTKQGNQDH SIRSRTEGSS SRYAMQKISA EQKKGEDDAD
501: MHLARKIMHN KQFRASTQAD DEYDFEDGPS RKSRKKQGGD DHKSIQKKTN RFLTQQERCL FCLENPNRPM HLVVSIANFT YLMLPKWQPV VPGHCCILPI
601: QHESATRTVD DNVWTEIRNF KKCLIMMFAK QEKEVVFLET VMGLAQQRRH CMVECIPLPQ DIAKEAPLYF KKAIDEAEDE WSQHNAKKLI DTSQKGLRNS
701: IPKHFPYFHV EFGLNKGFVH VIDDEKQFNI SLGLNVIRGM LHLAEEDMYR RRRYEAVEVQ KQAVESFSKE WKHFDWTKQL HETS
001: MFSGIKIIPR DEVHDDSWEG EREKSKGGKD RRRKNKDVNR KERRGEGSKR DGKKIAKSGD GETVDDDLLE GDIVRKKMGL DWMLPPTRKA DPNPASDVED
101: KFEESAPEVT KVNPRELNPY LKENGTGYPE EESEKKHGKD QLLPSSVVGD GGASWRMKAL KRAKEQAARE GLRLEEVAGE RYGSLGNLVE SVASQRAAPS
201: RAHLNAINNR RRGENEKNDS EKKPKERISE KGNNREYLKG ESLNHRVLRA PKTDPSLSWG KRKSQTHRNE DSKLISEAAA HMNKFSNDGN FMKEMLSKQK
301: NVSVSPVETR GDHRSDVEQE ALPSETNKDD EGTLPSMENL SVNKLAAKAL QLRMKGKHEE AQKIMEEAER LKAKQAVGDD SSKDHHSIRT AVRYPVKDMS
401: GRRKNEDDTD MHLAKSIMQN KQYKTSNQAA DDEYEYGDAP SKKSRKRESS SNIPEKDNRV KRIMTQQERC LFCFENPKRP KHLVVSIANF TYLMLPQHQP
501: LVQGHCCILP MQHEAASRSV DDNVWDEIRN FKKCLIMMYA KEGKDAVFLE TVIGLSQQRR HCLIECIPIP QEIAKEGPLY FKKAIDEAES EWSQHNAKKL
601: IDTSVKGLRN SIPKNFPYFH VEFGLDKGFV HVIDDEQQFN SNLGLNVIRG MLELPEEDMY RRRRQESVES QKKAVATFAR EWEHFDWTKQ LD
101: KFEESAPEVT KVNPRELNPY LKENGTGYPE EESEKKHGKD QLLPSSVVGD GGASWRMKAL KRAKEQAARE GLRLEEVAGE RYGSLGNLVE SVASQRAAPS
201: RAHLNAINNR RRGENEKNDS EKKPKERISE KGNNREYLKG ESLNHRVLRA PKTDPSLSWG KRKSQTHRNE DSKLISEAAA HMNKFSNDGN FMKEMLSKQK
301: NVSVSPVETR GDHRSDVEQE ALPSETNKDD EGTLPSMENL SVNKLAAKAL QLRMKGKHEE AQKIMEEAER LKAKQAVGDD SSKDHHSIRT AVRYPVKDMS
401: GRRKNEDDTD MHLAKSIMQN KQYKTSNQAA DDEYEYGDAP SKKSRKRESS SNIPEKDNRV KRIMTQQERC LFCFENPKRP KHLVVSIANF TYLMLPQHQP
501: LVQGHCCILP MQHEAASRSV DDNVWDEIRN FKKCLIMMYA KEGKDAVFLE TVIGLSQQRR HCLIECIPIP QEIAKEGPLY FKKAIDEAES EWSQHNAKKL
601: IDTSVKGLRN SIPKNFPYFH VEFGLDKGFV HVIDDEQQFN SNLGLNVIRG MLELPEEDMY RRRRQESVES QKKAVATFAR EWEHFDWTKQ LD
Arabidopsis Description
CwfJ-like family protein [Source:UniProtKB/TrEMBL;Acc:Q93ZX4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.