Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os03t0740700-01 | Rice | nucleus | 48.95 | 52.04 |
| Zm00001d033954_P001 | Maize | nucleus | 48.45 | 51.25 |
| EER93483 | Sorghum | nucleus | 48.08 | 50.79 |
| CDY41723 | Canola | nucleus | 42.26 | 50.74 |
| Bra027946.1-P | Field mustard | nucleus | 42.13 | 50.67 |
| CDY53572 | Canola | nucleus | 41.76 | 50.37 |
| AT1G56290.1 | Thale cress | nucleus | 43.0 | 50.14 |
| TraesCS5B01G384000.1 | Wheat | nucleus | 47.71 | 48.92 |
| TraesCS5A01G380400.2 | Wheat | nucleus | 47.34 | 48.29 |
| TraesCS5D01G390200.1 | Wheat | nucleus | 47.34 | 47.63 |
| KRH35769 | Soybean | nucleus | 45.48 | 46.69 |
| KRG90984 | Soybean | nucleus | 45.23 | 46.56 |
| VIT_05s0020g04950.t01 | Wine grape | nucleus | 45.97 | 45.8 |
| PGSC0003DMT400039096 | Potato | nucleus | 43.25 | 45.09 |
| Solyc09g083420.2.1 | Tomato | nucleus | 43.0 | 44.83 |
| HORVU5Hr1G094010.1 | Barley | plastid | 47.21 | 43.49 |
| GSMUA_Achr8P05530_001 | Banana | cytosol, extracellular, mitochondrion, nucleus | 12.27 | 16.39 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr3P29250_001 | EnsemblPlants:GSMUA_Achr3T29250_001 | EnsemblPlantsGene:GSMUA_Achr3G29250_001 | InterPro:Cwf19-like_C_dom-1 | InterPro:Cwf19-like_C_dom-2 | ncoils:Coil |
| PANTHER:PTHR12072 | PANTHER:PTHR12072:SF5 | PFAM:PF04676 | PFAM:PF04677 | SEG:seg | UniParc:UPI0002959E4E |
| UniProt:M0SIU1 | MapMan:35.1 | : | : | : | : |
Description
CWF19-like 2, cell cycle control, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr3G29250_001]
Coordinates
chr3:+:28455237..28463391
Molecular Weight (calculated)
92605.6 Da
IEP (calculated)
9.211
GRAVY (calculated)
-1.093
Length
807 amino acids
Sequence
(BLAST)
(BLAST)
001: MFSGVKFVPR DQLLSSSAKK PHSDSDGSGG EEKKYSSTIK KSKTKKRSKR DGGDASSEDD VHKMISTRGK RVKNKNKKNK RSKKHHSSYD DDDDDEGDDS
101: TLRTSDSESL DVKEVKRSKS RRKRRRRRQE LSEDDYSSSS DEYAEKKGKM KHQLLKNIRE RRDAKDLHSI EDSDDDGRDL LHQNDKELAR KELGLDWMLR
201: PAGRMTENSR AEVEEETEEH KTVEVTRTNP KELNPYLKDN GSGYPDDASI SEASDRLFSS SVVGDGGASW RLKALKRAKE QAAREGRKLD EVVEERWGSL
301: GQLTATVVAH RAAPARAHLR AINDRKRGPM ELSEVAPSDE TKEGIQEVRS GGRDYLRDVS SQIPQMRKPR HDDLSWKRNK GRNMSMEDKS LISSAISSLN
401: RFANDGNFMD NIARFQSKDD GISNSSSGAS PKASSNCMEK RLHTPRDRGP DEEASAQKQV QSANQLAAKV LQLRMKGKHD EAEKLSKEME AMVDKPDAGT
501: QSVRVETEGS TSRYIRKQMS REHKRREDDA DLHLAKTITQ NKQYSLGEDE EYGFDVAPSR KRNKKKEEMP AERSISRRLL TQQERCQFCF ENPSRPKHLV
601: VSIANFTYLM LPQWQPVVEG HCCILPMQHE AATRSVDKNV WEEIRNFKKC LLKMFARDDK DVVFLETVVG LAKQRRHCLL ECIPIPHLLA SQAPMYFRKA
701: IEEAEEEWGQ HDMKKVIPTS GNLRQVIPEN FSYFHVEFGL DKGFVHVIDK DSNFNSGFGL NVIRGLLRLP EEDMYRRRRH EPIEKQNQAV ANFAREWEHF
801: DWTRDLD
101: TLRTSDSESL DVKEVKRSKS RRKRRRRRQE LSEDDYSSSS DEYAEKKGKM KHQLLKNIRE RRDAKDLHSI EDSDDDGRDL LHQNDKELAR KELGLDWMLR
201: PAGRMTENSR AEVEEETEEH KTVEVTRTNP KELNPYLKDN GSGYPDDASI SEASDRLFSS SVVGDGGASW RLKALKRAKE QAAREGRKLD EVVEERWGSL
301: GQLTATVVAH RAAPARAHLR AINDRKRGPM ELSEVAPSDE TKEGIQEVRS GGRDYLRDVS SQIPQMRKPR HDDLSWKRNK GRNMSMEDKS LISSAISSLN
401: RFANDGNFMD NIARFQSKDD GISNSSSGAS PKASSNCMEK RLHTPRDRGP DEEASAQKQV QSANQLAAKV LQLRMKGKHD EAEKLSKEME AMVDKPDAGT
501: QSVRVETEGS TSRYIRKQMS REHKRREDDA DLHLAKTITQ NKQYSLGEDE EYGFDVAPSR KRNKKKEEMP AERSISRRLL TQQERCQFCF ENPSRPKHLV
601: VSIANFTYLM LPQWQPVVEG HCCILPMQHE AATRSVDKNV WEEIRNFKKC LLKMFARDDK DVVFLETVVG LAKQRRHCLL ECIPIPHLLA SQAPMYFRKA
701: IEEAEEEWGQ HDMKKVIPTS GNLRQVIPEN FSYFHVEFGL DKGFVHVIDK DSNFNSGFGL NVIRGLLRLP EEDMYRRRRH EPIEKQNQAV ANFAREWEHF
801: DWTRDLD
001: MFSGIKIIPR DEVHDDSWEG EREKSKGGKD RRRKNKDVNR KERRGEGSKR DGKKIAKSGD GETVDDDLLE GDIVRKKMGL DWMLPPTRKA DPNPASDVED
101: KFEESAPEVT KVNPRELNPY LKENGTGYPE EESEKKHGKD QLLPSSVVGD GGASWRMKAL KRAKEQAARE GLRLEEVAGE RYGSLGNLVE SVASQRAAPS
201: RAHLNAINNR RRGENEKNDS EKKPKERISE KGNNREYLKG ESLNHRVLRA PKTDPSLSWG KRKSQTHRNE DSKLISEAAA HMNKFSNDGN FMKEMLSKQK
301: NVSVSPVETR GDHRSDVEQE ALPSETNKDD EGTLPSMENL SVNKLAAKAL QLRMKGKHEE AQKIMEEAER LKAKQAVGDD SSKDHHSIRT AVRYPVKDMS
401: GRRKNEDDTD MHLAKSIMQN KQYKTSNQAA DDEYEYGDAP SKKSRKRESS SNIPEKDNRV KRIMTQQERC LFCFENPKRP KHLVVSIANF TYLMLPQHQP
501: LVQGHCCILP MQHEAASRSV DDNVWDEIRN FKKCLIMMYA KEGKDAVFLE TVIGLSQQRR HCLIECIPIP QEIAKEGPLY FKKAIDEAES EWSQHNAKKL
601: IDTSVKGLRN SIPKNFPYFH VEFGLDKGFV HVIDDEQQFN SNLGLNVIRG MLELPEEDMY RRRRQESVES QKKAVATFAR EWEHFDWTKQ LD
101: KFEESAPEVT KVNPRELNPY LKENGTGYPE EESEKKHGKD QLLPSSVVGD GGASWRMKAL KRAKEQAARE GLRLEEVAGE RYGSLGNLVE SVASQRAAPS
201: RAHLNAINNR RRGENEKNDS EKKPKERISE KGNNREYLKG ESLNHRVLRA PKTDPSLSWG KRKSQTHRNE DSKLISEAAA HMNKFSNDGN FMKEMLSKQK
301: NVSVSPVETR GDHRSDVEQE ALPSETNKDD EGTLPSMENL SVNKLAAKAL QLRMKGKHEE AQKIMEEAER LKAKQAVGDD SSKDHHSIRT AVRYPVKDMS
401: GRRKNEDDTD MHLAKSIMQN KQYKTSNQAA DDEYEYGDAP SKKSRKRESS SNIPEKDNRV KRIMTQQERC LFCFENPKRP KHLVVSIANF TYLMLPQHQP
501: LVQGHCCILP MQHEAASRSV DDNVWDEIRN FKKCLIMMYA KEGKDAVFLE TVIGLSQQRR HCLIECIPIP QEIAKEGPLY FKKAIDEAES EWSQHNAKKL
601: IDTSVKGLRN SIPKNFPYFH VEFGLDKGFV HVIDDEQQFN SNLGLNVIRG MLELPEEDMY RRRRQESVES QKKAVATFAR EWEHFDWTKQ LD
Arabidopsis Description
CwfJ-like family protein [Source:UniProtKB/TrEMBL;Acc:Q93ZX4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.