Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400039096 | Potato | nucleus | 54.32 | 56.85 |
| KRH35769 | Soybean | nucleus | 55.06 | 56.74 |
| Solyc09g083420.2.1 | Tomato | nucleus | 54.2 | 56.72 |
| KRG90984 | Soybean | nucleus | 54.69 | 56.51 |
| CDY41723 | Canola | nucleus | 45.56 | 54.91 |
| Bra027946.1-P | Field mustard | nucleus | 45.43 | 54.84 |
| CDY53572 | Canola | nucleus | 44.81 | 54.26 |
| AT1G56290.1 | Thale cress | nucleus | 46.17 | 54.05 |
| EER93483 | Sorghum | nucleus | 45.8 | 48.56 |
| Zm00001d033954_P001 | Maize | nucleus | 45.31 | 48.1 |
| Os03t0740700-01 | Rice | nucleus | 43.58 | 46.51 |
| GSMUA_Achr3P29250_001 | Banana | nucleus | 45.8 | 45.97 |
| TraesCS5B01G384000.1 | Wheat | nucleus | 42.96 | 44.22 |
| TraesCS5A01G380400.2 | Wheat | nucleus | 42.72 | 43.74 |
| TraesCS5D01G390200.1 | Wheat | nucleus | 43.09 | 43.52 |
| HORVU5Hr1G094010.1 | Barley | plastid | 42.1 | 38.93 |
| VIT_11s0016g02130.t01 | Wine grape | cytosol, extracellular, mitochondrion, plastid | 10.86 | 14.84 |
Protein Annotations
| EntrezGene:100264750 | wikigene:100264750 | MapMan:35.1 | ProteinID:CBI26380 | ProteinID:CBI26380.3 | ncoils:Coil |
| InterPro:Cwf19-like_C_dom-1 | InterPro:Cwf19-like_C_dom-2 | UniProt:D7T7A9 | EMBL:FN595749 | InterPro:HIT-like_sf | InterPro:IPR036265 |
| EntrezGene:LOC100264750 | wikigene:LOC100264750 | PFAM:PF04676 | PFAM:PF04677 | PANTHER:PTHR12072 | PANTHER:PTHR12072:SF5 |
| SUPFAM:SSF54197 | UniParc:UPI0001BE291F | ArrayExpress:VIT_05s0020g04950 | EnsemblPlantsGene:VIT_05s0020g04950 | EnsemblPlants:VIT_05s0020g04950.t01 | RefSeq:XP_002280477 |
| RefSeq:XP_002280477.2 | RefSeq:XP_010650013.1 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr5:-:6821647..6837187
Molecular Weight (calculated)
92345.1 Da
IEP (calculated)
9.595
GRAVY (calculated)
-1.143
Length
810 amino acids
Sequence
(BLAST)
(BLAST)
001: MLSGVKFIPR GRIDRAQDEK SSDSTKERKK SGNRKEKNRK KKKISRYSSS DDEEIEKIRK GSKKNKKWYS SEEYTSSSSE RESESSSERD GKKSRRRRNE
101: KKAYGDRSRD EASDRSKKRP QTMRELDSSE DYSSSDLEDE GGDGFSGRKD RNRRSGKEER TMSKKRGTKK DVAGEESLDD AGGSHSLTDK EIVRKEMGLE
201: WMLRPSDNSE RKPATTSDQV PEEPQADETM KVNPRELNPY LKDDGNGYPE EMDGTKVGGN RLLSSSVVGD GGASWRMKAL KRAQEQAARE GRKFDEVVEE
301: RWGSLGQLTV SLASHAAAPS RAHLHAIKSR KKGLTQEQQT PIQDYQRDSE KNSGREYLKD VSVRNPEMKA PKVHNSLSWG KRKGQNVSTK DVGLISDAVA
401: SLNKFANDGS FMHEVVHRQN IDTGGPLGSS YANCEGDVMS KSVSLETNQP GEASKQALSA NQLAAKALRL RMEGKHKEAE ELLKQTEIIK AKQGTEENTG
501: ERSGGGTSRY VMHDSSVRRK RKEDDADLHL AQKIMQSKQY NMSSRADDEY DFDDAPSRKT RKKEGGNDRK LTEKNNFANR ILTQQERCQF CFENPTRPRH
601: LVVAIANFSY LMLPQWQPVV PGHCCILPMQ HESSTRTLDN NVWDEIRNFK KCLIMMFAKQ EKDLVFLETV MGLAQQRRHC LVECIPLPRE TAKQAPLYFK
701: KAIDEAEDEW SQHNAKKLID TSEKGLRGSI PKDFPYFHVE FGLNKGFVHV IDDEKQFKSS LGLDVIRGML RLPEEDMHRR RRHESAEAQK QAVVNFARDW
801: EPFDWTKQLE
101: KKAYGDRSRD EASDRSKKRP QTMRELDSSE DYSSSDLEDE GGDGFSGRKD RNRRSGKEER TMSKKRGTKK DVAGEESLDD AGGSHSLTDK EIVRKEMGLE
201: WMLRPSDNSE RKPATTSDQV PEEPQADETM KVNPRELNPY LKDDGNGYPE EMDGTKVGGN RLLSSSVVGD GGASWRMKAL KRAQEQAARE GRKFDEVVEE
301: RWGSLGQLTV SLASHAAAPS RAHLHAIKSR KKGLTQEQQT PIQDYQRDSE KNSGREYLKD VSVRNPEMKA PKVHNSLSWG KRKGQNVSTK DVGLISDAVA
401: SLNKFANDGS FMHEVVHRQN IDTGGPLGSS YANCEGDVMS KSVSLETNQP GEASKQALSA NQLAAKALRL RMEGKHKEAE ELLKQTEIIK AKQGTEENTG
501: ERSGGGTSRY VMHDSSVRRK RKEDDADLHL AQKIMQSKQY NMSSRADDEY DFDDAPSRKT RKKEGGNDRK LTEKNNFANR ILTQQERCQF CFENPTRPRH
601: LVVAIANFSY LMLPQWQPVV PGHCCILPMQ HESSTRTLDN NVWDEIRNFK KCLIMMFAKQ EKDLVFLETV MGLAQQRRHC LVECIPLPRE TAKQAPLYFK
701: KAIDEAEDEW SQHNAKKLID TSEKGLRGSI PKDFPYFHVE FGLNKGFVHV IDDEKQFKSS LGLDVIRGML RLPEEDMHRR RRHESAEAQK QAVVNFARDW
801: EPFDWTKQLE
001: MFSGIKIIPR DEVHDDSWEG EREKSKGGKD RRRKNKDVNR KERRGEGSKR DGKKIAKSGD GETVDDDLLE GDIVRKKMGL DWMLPPTRKA DPNPASDVED
101: KFEESAPEVT KVNPRELNPY LKENGTGYPE EESEKKHGKD QLLPSSVVGD GGASWRMKAL KRAKEQAARE GLRLEEVAGE RYGSLGNLVE SVASQRAAPS
201: RAHLNAINNR RRGENEKNDS EKKPKERISE KGNNREYLKG ESLNHRVLRA PKTDPSLSWG KRKSQTHRNE DSKLISEAAA HMNKFSNDGN FMKEMLSKQK
301: NVSVSPVETR GDHRSDVEQE ALPSETNKDD EGTLPSMENL SVNKLAAKAL QLRMKGKHEE AQKIMEEAER LKAKQAVGDD SSKDHHSIRT AVRYPVKDMS
401: GRRKNEDDTD MHLAKSIMQN KQYKTSNQAA DDEYEYGDAP SKKSRKRESS SNIPEKDNRV KRIMTQQERC LFCFENPKRP KHLVVSIANF TYLMLPQHQP
501: LVQGHCCILP MQHEAASRSV DDNVWDEIRN FKKCLIMMYA KEGKDAVFLE TVIGLSQQRR HCLIECIPIP QEIAKEGPLY FKKAIDEAES EWSQHNAKKL
601: IDTSVKGLRN SIPKNFPYFH VEFGLDKGFV HVIDDEQQFN SNLGLNVIRG MLELPEEDMY RRRRQESVES QKKAVATFAR EWEHFDWTKQ LD
101: KFEESAPEVT KVNPRELNPY LKENGTGYPE EESEKKHGKD QLLPSSVVGD GGASWRMKAL KRAKEQAARE GLRLEEVAGE RYGSLGNLVE SVASQRAAPS
201: RAHLNAINNR RRGENEKNDS EKKPKERISE KGNNREYLKG ESLNHRVLRA PKTDPSLSWG KRKSQTHRNE DSKLISEAAA HMNKFSNDGN FMKEMLSKQK
301: NVSVSPVETR GDHRSDVEQE ALPSETNKDD EGTLPSMENL SVNKLAAKAL QLRMKGKHEE AQKIMEEAER LKAKQAVGDD SSKDHHSIRT AVRYPVKDMS
401: GRRKNEDDTD MHLAKSIMQN KQYKTSNQAA DDEYEYGDAP SKKSRKRESS SNIPEKDNRV KRIMTQQERC LFCFENPKRP KHLVVSIANF TYLMLPQHQP
501: LVQGHCCILP MQHEAASRSV DDNVWDEIRN FKKCLIMMYA KEGKDAVFLE TVIGLSQQRR HCLIECIPIP QEIAKEGPLY FKKAIDEAES EWSQHNAKKL
601: IDTSVKGLRN SIPKNFPYFH VEFGLDKGFV HVIDDEQQFN SNLGLNVIRG MLELPEEDMY RRRRQESVES QKKAVATFAR EWEHFDWTKQ LD
Arabidopsis Description
CwfJ-like family protein [Source:UniProtKB/TrEMBL;Acc:Q93ZX4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.