Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER93483 | Sorghum | nucleus | 71.01 | 70.55 |
| Zm00001d033954_P001 | Maize | nucleus | 69.96 | 69.59 |
| TraesCS5B01G384000.1 | Wheat | nucleus | 68.91 | 66.45 |
| TraesCS5A01G380400.2 | Wheat | nucleus | 68.77 | 65.99 |
| TraesCS5D01G390200.1 | Wheat | nucleus | 67.72 | 64.09 |
| HORVU5Hr1G094010.1 | Barley | plastid | 66.53 | 57.65 |
| CDY41723 | Canola | nucleus | 44.01 | 49.7 |
| Bra027946.1-P | Field mustard | nucleus | 43.87 | 49.63 |
| CDY53572 | Canola | nucleus | 43.48 | 49.33 |
| GSMUA_Achr3P29250_001 | Banana | nucleus | 52.04 | 48.95 |
| AT1G56290.1 | Thale cress | nucleus | 44.01 | 48.27 |
| KRG90984 | Soybean | nucleus | 45.45 | 44.01 |
| KRH35769 | Soybean | nucleus | 45.19 | 43.64 |
| VIT_05s0020g04950.t01 | Wine grape | nucleus | 46.51 | 43.58 |
| PGSC0003DMT400039096 | Potato | nucleus | 43.35 | 42.51 |
| Solyc09g083420.2.1 | Tomato | nucleus | 43.21 | 42.38 |
| Os09t0364000-01 | Rice | plastid | 13.18 | 16.31 |
Protein Annotations
| EnsemblPlants:Os03t0740700-01 | EnsemblPlantsGene:Os03g0740700 | Gene3D:3.30.428.10 | InterPro:Cwf19-like_C_dom-1 | InterPro:Cwf19-like_C_dom-2 | InterPro:HIT-like_sf |
| InterPro:IPR036265 | ncoils:Coil | PANTHER:PTHR12072 | PANTHER:PTHR12072:SF5 | PFAM:PF04676 | PFAM:PF04677 |
| ProteinID:BAF13133.1 | ProteinID:BAS86303.1 | SEG:seg | SUPFAM:SSF54197 | UniParc:UPI0000E12201 | UniProt:Q0DNQ5 |
| MapMan:35.1 | : | : | : | : | : |
Description
Protein similar to CwfJ, C-terminal 2 domain containing protein. (Os03t0740700-01)
Coordinates
chr3:+:30386616..30391989
Molecular Weight (calculated)
86025.1 Da
IEP (calculated)
7.207
GRAVY (calculated)
-1.121
Length
759 amino acids
Sequence
(BLAST)
(BLAST)
001: MLSGVKFIPR EQIGEDALGG AGSAGSDSSE DRRRRKKRGR KGRDKEERRD RRRRRRRSKY GSDSEEGSDS GDSIEEEEEK GLSRSKHRRK HQRRRHEFSD
101: DDDDDDEESS GESDKRRGNR KSKLGGAAGD DDDEEEEDEG IGGEELRASD IVRKEMGLEW MLKSASSGRA ESSQAGGADK DEEEVAPEEV KKANPKELNP
201: YLRDNGSGYP DESSPSNAGN QLLASSVVGD GGASWRLKAL KRAKEQAARE GKQLEEVVGE RWGSLGHLAA SVSASRAAPS HAHLHAIRGR KAGQAGSSEE
301: HSKENPKEGQ QGGDSGRREY LKDVSSRHHA MRKPKPDSVP WKRNRQNISS EDQALISSAI AGINKFSNDG SFLEKINNLE SKTVNVLTAE VDELKSDKGS
401: SKKAPSVSTQ KLNANQLAAK ILQLRMKGKH EEAEQLSREM EAVLENEDTA VEEPRHEVRS STRNTIKPSA ADRRKREEDA DRHLANKIMH NKQYNMSKSI
501: EDEYDFGDAP SKKGKRRNKD AHEERRSTHW LTTQKERCMY CFENPSRPKH LVVAIGNFTY LMLPQLEPVV PGHCIILPLQ HESATRTVDR SVWEEIRNFK
601: KCLLKMFAQQ DKDIVFMETV ISLAKQRRHC MIECIPIPSE VSNNAPMYFK KAIDEAEEEW TQHDMKKLIP TKGNLHQVIP ENFAYFHVEF GLDRGFAHVI
701: DDESKFSAGF GLNVIRGMLQ LREEDMHRRR RHESMDNQKQ AVANFMKDWE PFDWTKQLD
101: DDDDDDEESS GESDKRRGNR KSKLGGAAGD DDDEEEEDEG IGGEELRASD IVRKEMGLEW MLKSASSGRA ESSQAGGADK DEEEVAPEEV KKANPKELNP
201: YLRDNGSGYP DESSPSNAGN QLLASSVVGD GGASWRLKAL KRAKEQAARE GKQLEEVVGE RWGSLGHLAA SVSASRAAPS HAHLHAIRGR KAGQAGSSEE
301: HSKENPKEGQ QGGDSGRREY LKDVSSRHHA MRKPKPDSVP WKRNRQNISS EDQALISSAI AGINKFSNDG SFLEKINNLE SKTVNVLTAE VDELKSDKGS
401: SKKAPSVSTQ KLNANQLAAK ILQLRMKGKH EEAEQLSREM EAVLENEDTA VEEPRHEVRS STRNTIKPSA ADRRKREEDA DRHLANKIMH NKQYNMSKSI
501: EDEYDFGDAP SKKGKRRNKD AHEERRSTHW LTTQKERCMY CFENPSRPKH LVVAIGNFTY LMLPQLEPVV PGHCIILPLQ HESATRTVDR SVWEEIRNFK
601: KCLLKMFAQQ DKDIVFMETV ISLAKQRRHC MIECIPIPSE VSNNAPMYFK KAIDEAEEEW TQHDMKKLIP TKGNLHQVIP ENFAYFHVEF GLDRGFAHVI
701: DDESKFSAGF GLNVIRGMLQ LREEDMHRRR RHESMDNQKQ AVANFMKDWE PFDWTKQLD
001: MFSGIKIIPR DEVHDDSWEG EREKSKGGKD RRRKNKDVNR KERRGEGSKR DGKKIAKSGD GETVDDDLLE GDIVRKKMGL DWMLPPTRKA DPNPASDVED
101: KFEESAPEVT KVNPRELNPY LKENGTGYPE EESEKKHGKD QLLPSSVVGD GGASWRMKAL KRAKEQAARE GLRLEEVAGE RYGSLGNLVE SVASQRAAPS
201: RAHLNAINNR RRGENEKNDS EKKPKERISE KGNNREYLKG ESLNHRVLRA PKTDPSLSWG KRKSQTHRNE DSKLISEAAA HMNKFSNDGN FMKEMLSKQK
301: NVSVSPVETR GDHRSDVEQE ALPSETNKDD EGTLPSMENL SVNKLAAKAL QLRMKGKHEE AQKIMEEAER LKAKQAVGDD SSKDHHSIRT AVRYPVKDMS
401: GRRKNEDDTD MHLAKSIMQN KQYKTSNQAA DDEYEYGDAP SKKSRKRESS SNIPEKDNRV KRIMTQQERC LFCFENPKRP KHLVVSIANF TYLMLPQHQP
501: LVQGHCCILP MQHEAASRSV DDNVWDEIRN FKKCLIMMYA KEGKDAVFLE TVIGLSQQRR HCLIECIPIP QEIAKEGPLY FKKAIDEAES EWSQHNAKKL
601: IDTSVKGLRN SIPKNFPYFH VEFGLDKGFV HVIDDEQQFN SNLGLNVIRG MLELPEEDMY RRRRQESVES QKKAVATFAR EWEHFDWTKQ LD
101: KFEESAPEVT KVNPRELNPY LKENGTGYPE EESEKKHGKD QLLPSSVVGD GGASWRMKAL KRAKEQAARE GLRLEEVAGE RYGSLGNLVE SVASQRAAPS
201: RAHLNAINNR RRGENEKNDS EKKPKERISE KGNNREYLKG ESLNHRVLRA PKTDPSLSWG KRKSQTHRNE DSKLISEAAA HMNKFSNDGN FMKEMLSKQK
301: NVSVSPVETR GDHRSDVEQE ALPSETNKDD EGTLPSMENL SVNKLAAKAL QLRMKGKHEE AQKIMEEAER LKAKQAVGDD SSKDHHSIRT AVRYPVKDMS
401: GRRKNEDDTD MHLAKSIMQN KQYKTSNQAA DDEYEYGDAP SKKSRKRESS SNIPEKDNRV KRIMTQQERC LFCFENPKRP KHLVVSIANF TYLMLPQHQP
501: LVQGHCCILP MQHEAASRSV DDNVWDEIRN FKKCLIMMYA KEGKDAVFLE TVIGLSQQRR HCLIECIPIP QEIAKEGPLY FKKAIDEAES EWSQHNAKKL
601: IDTSVKGLRN SIPKNFPYFH VEFGLDKGFV HVIDDEQQFN SNLGLNVIRG MLELPEEDMY RRRRQESVES QKKAVATFAR EWEHFDWTKQ LD
Arabidopsis Description
CwfJ-like family protein [Source:UniProtKB/TrEMBL;Acc:Q93ZX4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.