Factsheet for Os09t0364000-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 8
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G198900.1	Wheat	plastid	83.52	84.21
TraesCS5B01G191100.1	Wheat	plastid	83.2	83.88
TraesCS5A01G192000.1	Wheat	plastid	83.03	83.72
KXG35490	Sorghum	plastid	81.73	82.54
Zm00001d020242_P002	Maize	plastid	77.49	82.32
HORVU5Hr1G057610.14	Barley	plastid	82.06	77.86
GSMUA_Achr8P05530_001	Banana	cytosol, extracellular, mitochondrion, nucleus	64.93	65.89
KRH19176	Soybean	mitochondrion	58.4	59.57
PGSC0003DMT400000758	Potato	cytosol, extracellular, mitochondrion, nucleus	57.75	59.4
VIT_11s0016g02130.t01	Wine grape	cytosol, extracellular, mitochondrion, plastid	57.26	59.19
Solyc12g008870.1.1	Tomato	nucleus	32.3	57.73
KRH02709	Soybean	nucleus	50.73	57.59
AT5G56900.2	Thale cress	mitochondrion	55.3	56.88
CDY32752	Canola	mitochondrion	53.67	56.53
CDY32895	Canola	mitochondrion	54.32	55.97
Bra002785.1-P	Field mustard	mitochondrion, plastid	53.67	54.47
CDY33859	Canola	cytosol	10.11	52.54
Solyc12g008890.1.1	Tomato	nucleus	10.11	49.21
Solyc05g032650.1.1	Tomato	extracellular, golgi	21.04	46.24
CDX80571	Canola	extracellular	13.87	37.28
CDY61116	Canola	cytosol	3.59	18.03
Os03t0740700-01	Rice	nucleus	16.31	13.18

Protein Annotations

MapMan:15.5.16	Gene3D:3.30.428.10	Gene3D:4.10.1000.10	EntrezGene:4346865	EMBL:AK111875	ProteinID:BAD33719.1
ProteinID:BAF24911.1	ProteinID:BAT07721.1	InterPro:Cwf19-like_C_dom-1	InterPro:Cwf19-like_C_dom-2	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005829	GO:GO:0046872	InterPro:HIT-like_sf	InterPro:IPR000571	InterPro:IPR036265	EnsemblPlantsGene:Os09g0364000
EnsemblPlants:Os09t0364000-01	PFAM:PF04676	PFAM:PF04677	PFscan:PS50103	PANTHER:PTHR12072	PANTHER:PTHR12072:SF4
UniProt:Q69NK8	SMART:SM00356	SUPFAM:SSF54197	SUPFAM:SSF90229	UniParc:UPI00003B067D	RefSeq:XP_015651291.1
InterPro:Znf_CCCH	InterPro:Znf_CCCH_sf	SEG:seg	:	:	:

Description

ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 59Histidine triad motif domain containing protein. (Os09t0364000-01)

Coordinates

chr9:+:11934577..11940113

Molecular Weight (calculated)

66912.9 Da

IEP (calculated)

6.988

GRAVY (calculated)

-0.365

Length

613 amino acids

Sequence
(BLAST)

001: MAAAAASPSP ATPPRILLAG DANGRLHQLF KRVTSVNQST GPFHALLCVG QFFSPDAGDG DGGGGGEVAD YLEGRAAVPI PTYFTGDYGP AAPRLLAKAA
101: SSARGFSPGG IQICPNLFWL RGSARFTLHG LSVVYLSGRK GPGGPGCYSQ DDVDALRALA EEPGIVDLFL TNEWPAGVVN GVDTSNAPSQ ISDPHGYDPV
201: VAELVAEIKP RYHIAGSKGV FYAREPYVSD SAAHVTRFIG LANVGNKEKQ KFIHAISPTP ASTMSSVDIH ARPPNTTLSP YISPAKSVPV EETPKRPAED
301: ADLQYWRYDV KKQRHGEAGG NRLCFKFTSS GSCPRGSKCN YRHDEEAREH YNRNVCFDFL NKGKCEKGPE CRFAHSLSDE GAVRDTKPRS ERRRVESSCW
401: FCLSSPDVES HLVISIGEGY YCALAKGPLV PNHVLVIPVE HCSSTLKMPV EAEAELGRYK DALAKYFEKQ GKIAIYFEWV SQQSRHANLQ AVPVPLSKAS
501: SVKKIFHLAA QRLGFEFSVV NPDGDANRAR ELLRSECDSK SSLFYVELPE GSVLLHLVDS NEKFPAQFGR EVLAGLLSMA DRADWRNCKV SKEEEIQMVD
601: DFKQGFREFD PAE

Best Arabidopsis Sequence Match ( AT5G56900.2 )
(BLAST)

001: MAPRILLCGD PLGRLNQLFK RVQSVSKSAG PFDALICVGQ FFPDSPEILD EFLDYVEGRA QVPIPTYFTG DYGVVAPKIL STTSKKAENQ GFKMDGLEVC
101: HNLFWLRGSG KFSLHGLSVA YLSGRQSSES QFGKYSQDDV DALRALAEEP GGVDLFLTNE WPAGVTNRAA VSDIPVGISD SSCSDSTVSE LVMEVKPRYH
201: IAGSMGVFYA REPYLNAEST HVTRFIGLAQ VGNKNKQKFL HALSPTPTST MSPAELSAKP PKTTLWPYNL QDGAAESKKR PNDSDSDSQY WRYDVPKRQK
301: SGSQGEKLCF KFVCSGSCPR GEDCHFQHNA EAREQCRRGV CLDLIIKGKC EKGPECSYKH EFQDESSIQR KPRSENANRS KECWFCLSSP SVESHLIVSV
401: GESFYCALPK GSLVEDHILI IPIEHLPNTL VLSPEVESEL SRYQNGLRNC YKSQGNDAVF FELVSKRVSH ANLQVVPVPS SRARLLPNIF SLAAEKLGFK
501: LVTKKFNDST DGRKYLQKEY NAALGLFYVE LPDGTVLSHT LEENEVFPAQ FGREVLAGLL KIPDRADWRN CKISQEEEAK LAEDFKKQFQ EFDPCQ

Arabidopsis Description

Zinc finger CCCH domain-containing protein 64 [Source:UniProtKB/Swiss-Prot;Acc:Q84WU9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.