Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G384000.1 | Wheat | nucleus | 78.31 | 87.17 |
| TraesCS5D01G390200.1 | Wheat | nucleus | 79.45 | 86.78 |
| TraesCS5A01G380400.2 | Wheat | nucleus | 75.91 | 84.07 |
| Os03t0740700-01 | Rice | nucleus | 57.65 | 66.53 |
| EER93483 | Sorghum | nucleus | 57.08 | 65.44 |
| Zm00001d033954_P001 | Maize | nucleus | 56.74 | 65.14 |
| GSMUA_Achr3P29250_001 | Banana | nucleus | 43.49 | 47.21 |
| CDY41723 | Canola | nucleus | 35.73 | 46.58 |
| Bra027946.1-P | Field mustard | nucleus | 35.62 | 46.5 |
| AT1G56290.1 | Thale cress | nucleus | 36.64 | 46.39 |
| CDY53572 | Canola | nucleus | 35.39 | 46.34 |
| Solyc09g083420.2.1 | Tomato | nucleus | 37.56 | 42.51 |
| PGSC0003DMT400039096 | Potato | nucleus | 37.44 | 42.38 |
| KRH35769 | Soybean | nucleus | 38.01 | 42.37 |
| KRG90984 | Soybean | nucleus | 37.79 | 42.22 |
| VIT_05s0020g04950.t01 | Wine grape | nucleus | 38.93 | 42.1 |
| HORVU5Hr1G057610.14 | Barley | plastid | 12.79 | 17.34 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G094010.1 | EnsemblPlantsGene:HORVU5Hr1G094010 | InterPro:Cwf19-like_C_dom-1 | InterPro:Cwf19-like_C_dom-2 | InterPro:HIT-like_sf | InterPro:IPR036265 |
| ncoils:Coil | PANTHER:PTHR12072 | PANTHER:PTHR12072:SF5 | PFAM:PF04676 | PFAM:PF04677 | SEG:seg |
| SUPFAM:SSF54197 | UniParc:UPI000B46FA12 | UniProt:A0A287SB53 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chrchr5H:-:593567232..593572058
Molecular Weight (calculated)
98205.5 Da
IEP (calculated)
9.511
GRAVY (calculated)
-1.081
Length
876 amino acids
Sequence
(BLAST)
(BLAST)
001: TGSGCCNQTG AGIRRHLRSL PTAPNSPQNT PYPGRTHLQA RRPAAPSPTS RPLSTAAADL PLISSPLPSP RARTPPPPGE ILPSATMLLG AKVVPRDKAV
101: LKQGGGDGDG SGSDGSPGKV RTRRSSGSKR RDKEEKRRRR HRRRSRRRSD SSEEGSGDSV DEEEEEELSR SKRRRKRGRR GRRDFSDEDE SSAESDEGRG
201: SGKGKRGGAA SSDDDDEDEE EEEMGGDGTR ASEVVRKEMG LEWMLKSAST SQPEGSRAQR ADNDEEKFEA THEEVKKPNP KEMNPYMRDN GSGYPDEATA
301: AKAASQLLAS SVVGDGGASW RLKALKRAKE QAAREGRKIE EVVEERWGSL GHLAASVSTS RIAPSYAHLQ AIRARKAGQA NNSEKSSKVD QQEDQRGEES
401: GGGRQYLQGV SSRDHAMRKP RPDSVTWKKN RQNMSSEDRT LISSALASIN KFSNDGSFMD KISNHDSKNT NASNVEKRDS EQKAHQESSK ISSSVSTQRQ
501: ESSKISSSVN TQKQESSKIS YSVSTQKLNA NQLAAKVLQL RMKGKHEEAD QLSREMETVL ENQSASVEEP RHVKENSSTR HTIKPSAADR RKREEDADLH
601: LANKIMHNKQ YNMSKSVEDE YEYGDAPTKK GKRTREAQQD NRSTRRPILT QKERCLYCFE NPSRPKHLVI AIGNFTYLML PQFEPLVPGH CVILPLQHES
701: STRTVDKNVW EEIRNFKKCL LKMFAQQDKD VVFMETVISL VKQQRHCMIE CIPVPCEVSN KAPMYFKKAI DEAEEEWSQH EMKKLIPTSG NLRQCIPENF
801: AYFHVEFGLD RGFVHVIDDE SKFGAGFGLN VLRGVLRLPG EDMHRRRRHE SMDNQKQAVA GFMKDWEPFD WTKQLE
101: LKQGGGDGDG SGSDGSPGKV RTRRSSGSKR RDKEEKRRRR HRRRSRRRSD SSEEGSGDSV DEEEEEELSR SKRRRKRGRR GRRDFSDEDE SSAESDEGRG
201: SGKGKRGGAA SSDDDDEDEE EEEMGGDGTR ASEVVRKEMG LEWMLKSAST SQPEGSRAQR ADNDEEKFEA THEEVKKPNP KEMNPYMRDN GSGYPDEATA
301: AKAASQLLAS SVVGDGGASW RLKALKRAKE QAAREGRKIE EVVEERWGSL GHLAASVSTS RIAPSYAHLQ AIRARKAGQA NNSEKSSKVD QQEDQRGEES
401: GGGRQYLQGV SSRDHAMRKP RPDSVTWKKN RQNMSSEDRT LISSALASIN KFSNDGSFMD KISNHDSKNT NASNVEKRDS EQKAHQESSK ISSSVSTQRQ
501: ESSKISSSVN TQKQESSKIS YSVSTQKLNA NQLAAKVLQL RMKGKHEEAD QLSREMETVL ENQSASVEEP RHVKENSSTR HTIKPSAADR RKREEDADLH
601: LANKIMHNKQ YNMSKSVEDE YEYGDAPTKK GKRTREAQQD NRSTRRPILT QKERCLYCFE NPSRPKHLVI AIGNFTYLML PQFEPLVPGH CVILPLQHES
701: STRTVDKNVW EEIRNFKKCL LKMFAQQDKD VVFMETVISL VKQQRHCMIE CIPVPCEVSN KAPMYFKKAI DEAEEEWSQH EMKKLIPTSG NLRQCIPENF
801: AYFHVEFGLD RGFVHVIDDE SKFGAGFGLN VLRGVLRLPG EDMHRRRRHE SMDNQKQAVA GFMKDWEPFD WTKQLE
001: MFSGIKIIPR DEVHDDSWEG EREKSKGGKD RRRKNKDVNR KERRGEGSKR DGKKIAKSGD GETVDDDLLE GDIVRKKMGL DWMLPPTRKA DPNPASDVED
101: KFEESAPEVT KVNPRELNPY LKENGTGYPE EESEKKHGKD QLLPSSVVGD GGASWRMKAL KRAKEQAARE GLRLEEVAGE RYGSLGNLVE SVASQRAAPS
201: RAHLNAINNR RRGENEKNDS EKKPKERISE KGNNREYLKG ESLNHRVLRA PKTDPSLSWG KRKSQTHRNE DSKLISEAAA HMNKFSNDGN FMKEMLSKQK
301: NVSVSPVETR GDHRSDVEQE ALPSETNKDD EGTLPSMENL SVNKLAAKAL QLRMKGKHEE AQKIMEEAER LKAKQAVGDD SSKDHHSIRT AVRYPVKDMS
401: GRRKNEDDTD MHLAKSIMQN KQYKTSNQAA DDEYEYGDAP SKKSRKRESS SNIPEKDNRV KRIMTQQERC LFCFENPKRP KHLVVSIANF TYLMLPQHQP
501: LVQGHCCILP MQHEAASRSV DDNVWDEIRN FKKCLIMMYA KEGKDAVFLE TVIGLSQQRR HCLIECIPIP QEIAKEGPLY FKKAIDEAES EWSQHNAKKL
601: IDTSVKGLRN SIPKNFPYFH VEFGLDKGFV HVIDDEQQFN SNLGLNVIRG MLELPEEDMY RRRRQESVES QKKAVATFAR EWEHFDWTKQ LD
101: KFEESAPEVT KVNPRELNPY LKENGTGYPE EESEKKHGKD QLLPSSVVGD GGASWRMKAL KRAKEQAARE GLRLEEVAGE RYGSLGNLVE SVASQRAAPS
201: RAHLNAINNR RRGENEKNDS EKKPKERISE KGNNREYLKG ESLNHRVLRA PKTDPSLSWG KRKSQTHRNE DSKLISEAAA HMNKFSNDGN FMKEMLSKQK
301: NVSVSPVETR GDHRSDVEQE ALPSETNKDD EGTLPSMENL SVNKLAAKAL QLRMKGKHEE AQKIMEEAER LKAKQAVGDD SSKDHHSIRT AVRYPVKDMS
401: GRRKNEDDTD MHLAKSIMQN KQYKTSNQAA DDEYEYGDAP SKKSRKRESS SNIPEKDNRV KRIMTQQERC LFCFENPKRP KHLVVSIANF TYLMLPQHQP
501: LVQGHCCILP MQHEAASRSV DDNVWDEIRN FKKCLIMMYA KEGKDAVFLE TVIGLSQQRR HCLIECIPIP QEIAKEGPLY FKKAIDEAES EWSQHNAKKL
601: IDTSVKGLRN SIPKNFPYFH VEFGLDKGFV HVIDDEQQFN SNLGLNVIRG MLELPEEDMY RRRRQESVES QKKAVATFAR EWEHFDWTKQ LD
Arabidopsis Description
CwfJ-like family protein [Source:UniProtKB/TrEMBL;Acc:Q93ZX4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.