Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d033954_P001 | Maize | nucleus | 93.32 | 93.45 |
| Os03t0740700-01 | Rice | nucleus | 70.55 | 71.01 |
| TraesCS5B01G384000.1 | Wheat | nucleus | 67.93 | 65.95 |
| TraesCS5D01G390200.1 | Wheat | nucleus | 68.59 | 65.34 |
| TraesCS5A01G380400.2 | Wheat | nucleus | 67.41 | 65.11 |
| HORVU5Hr1G094010.1 | Barley | plastid | 65.44 | 57.08 |
| GSMUA_Achr3P29250_001 | Banana | nucleus | 50.79 | 48.08 |
| CDY53572 | Canola | nucleus | 41.88 | 47.83 |
| CDY41723 | Canola | nucleus | 42.02 | 47.77 |
| Bra027946.1-P | Field mustard | nucleus | 41.88 | 47.69 |
| AT1G56290.1 | Thale cress | nucleus | 42.67 | 47.11 |
| VIT_05s0020g04950.t01 | Wine grape | nucleus | 48.56 | 45.8 |
| KRH35769 | Soybean | nucleus | 44.9 | 43.64 |
| KRG90984 | Soybean | nucleus | 44.76 | 43.62 |
| PGSC0003DMT400039096 | Potato | nucleus | 44.11 | 43.54 |
| Solyc09g083420.2.1 | Tomato | nucleus | 43.98 | 43.41 |
| KXG35490 | Sorghum | plastid | 13.09 | 16.47 |
Protein Annotations
| EnsemblPlants:EER93483 | EnsemblPlantsGene:SORBI_3001G096000 | EntrezGene:8060494 | GO:GO:0003674 | GO:GO:0003824 | InterPro:Cwf19-like_C_dom-1 |
| InterPro:Cwf19-like_C_dom-2 | InterPro:HIT-like_sf | InterPro:IPR036265 | ncoils:Coil | PANTHER:PTHR12072 | PANTHER:PTHR12072:SF5 |
| PFAM:PF04676 | PFAM:PF04677 | ProteinID:EER93483 | ProteinID:EER93483.1 | RefSeq:XP_002466485.1 | SEG:seg |
| SUPFAM:SSF54197 | unigene:Sbi.12713 | UniParc:UPI0001A826FA | UniProt:C5X1A0 | MapMan:35.1 | : |
Description
hypothetical protein
Coordinates
chr1:-:7387299..7391050
Molecular Weight (calculated)
87296.8 Da
IEP (calculated)
9.359
GRAVY (calculated)
-1.152
Length
764 amino acids
Sequence
(BLAST)
(BLAST)
001: MLSGVKLVPR EQIQSDQRRR GDRGSDSDSS DGKRPSKHSK RGRDKKEKKK RKSSRRQRRR SKRYSSEESS ASDTDDSIGE EEEEDVSRSK RRGKDRRRRR
101: NFSDDDESES SESDRGRAPR RGKQRRNDED EEEDTEGEGL RASEVVRREM GLEWMLKPAS SSRAEGSTVG KADNIEKDET ANEEIMRPNP KELNPYLKDN
201: GTGYPEESTP SNAGSQLLAS SVVGDGGASW RLKALKRAKE QAAREGRKLE EVVEERWGSL GDLAVSVSAS RAAHSHAHLH AIRGRKSGNA DNSEERVKGN
301: PEGQLDGSSG RREYLRDVSS QHHAMRKPKP DSVPWKKRRQ NISSEDQALI SSAVASLNKF SDDGSFMEKI NNLESKNTNV STASASADEQ RDNEQKSLKE
401: SSNKVPLVSA QKLNANQMAA KILQLRMKGK HQEAEQLSRE MEALLENQDT AHEKPGHGKE RSSISHTLKP SAADRRRREE DADLHLANKI MHNKQYNMSK
501: SIEDEYYFGD APSKKDKRRN KEAHDERRNT SRLMLTQKER CLYCFENPSR PKHLVVAIGN FSYLMLPQFE PVVPGHCIIL PLQHESGTRT VDQNVWGEIR
601: NFKKCLLKMF AQQDKDVVFM ETVISLARQR RHCMIECIPV PSEVSSNAPM YFKKAIDEAE EEWTQHEMKK VIPTSASRNL RQVIPENFAY FHVEFGLDRG
701: FVHVIDDESK FSAGFGLNVI RGMLQLPEED MHRRRRHESM DNQRQAVASF MKDWEPFDWT KQLD
101: NFSDDDESES SESDRGRAPR RGKQRRNDED EEEDTEGEGL RASEVVRREM GLEWMLKPAS SSRAEGSTVG KADNIEKDET ANEEIMRPNP KELNPYLKDN
201: GTGYPEESTP SNAGSQLLAS SVVGDGGASW RLKALKRAKE QAAREGRKLE EVVEERWGSL GDLAVSVSAS RAAHSHAHLH AIRGRKSGNA DNSEERVKGN
301: PEGQLDGSSG RREYLRDVSS QHHAMRKPKP DSVPWKKRRQ NISSEDQALI SSAVASLNKF SDDGSFMEKI NNLESKNTNV STASASADEQ RDNEQKSLKE
401: SSNKVPLVSA QKLNANQMAA KILQLRMKGK HQEAEQLSRE MEALLENQDT AHEKPGHGKE RSSISHTLKP SAADRRRREE DADLHLANKI MHNKQYNMSK
501: SIEDEYYFGD APSKKDKRRN KEAHDERRNT SRLMLTQKER CLYCFENPSR PKHLVVAIGN FSYLMLPQFE PVVPGHCIIL PLQHESGTRT VDQNVWGEIR
601: NFKKCLLKMF AQQDKDVVFM ETVISLARQR RHCMIECIPV PSEVSSNAPM YFKKAIDEAE EEWTQHEMKK VIPTSASRNL RQVIPENFAY FHVEFGLDRG
701: FVHVIDDESK FSAGFGLNVI RGMLQLPEED MHRRRRHESM DNQRQAVASF MKDWEPFDWT KQLD
001: MFSGIKIIPR DEVHDDSWEG EREKSKGGKD RRRKNKDVNR KERRGEGSKR DGKKIAKSGD GETVDDDLLE GDIVRKKMGL DWMLPPTRKA DPNPASDVED
101: KFEESAPEVT KVNPRELNPY LKENGTGYPE EESEKKHGKD QLLPSSVVGD GGASWRMKAL KRAKEQAARE GLRLEEVAGE RYGSLGNLVE SVASQRAAPS
201: RAHLNAINNR RRGENEKNDS EKKPKERISE KGNNREYLKG ESLNHRVLRA PKTDPSLSWG KRKSQTHRNE DSKLISEAAA HMNKFSNDGN FMKEMLSKQK
301: NVSVSPVETR GDHRSDVEQE ALPSETNKDD EGTLPSMENL SVNKLAAKAL QLRMKGKHEE AQKIMEEAER LKAKQAVGDD SSKDHHSIRT AVRYPVKDMS
401: GRRKNEDDTD MHLAKSIMQN KQYKTSNQAA DDEYEYGDAP SKKSRKRESS SNIPEKDNRV KRIMTQQERC LFCFENPKRP KHLVVSIANF TYLMLPQHQP
501: LVQGHCCILP MQHEAASRSV DDNVWDEIRN FKKCLIMMYA KEGKDAVFLE TVIGLSQQRR HCLIECIPIP QEIAKEGPLY FKKAIDEAES EWSQHNAKKL
601: IDTSVKGLRN SIPKNFPYFH VEFGLDKGFV HVIDDEQQFN SNLGLNVIRG MLELPEEDMY RRRRQESVES QKKAVATFAR EWEHFDWTKQ LD
101: KFEESAPEVT KVNPRELNPY LKENGTGYPE EESEKKHGKD QLLPSSVVGD GGASWRMKAL KRAKEQAARE GLRLEEVAGE RYGSLGNLVE SVASQRAAPS
201: RAHLNAINNR RRGENEKNDS EKKPKERISE KGNNREYLKG ESLNHRVLRA PKTDPSLSWG KRKSQTHRNE DSKLISEAAA HMNKFSNDGN FMKEMLSKQK
301: NVSVSPVETR GDHRSDVEQE ALPSETNKDD EGTLPSMENL SVNKLAAKAL QLRMKGKHEE AQKIMEEAER LKAKQAVGDD SSKDHHSIRT AVRYPVKDMS
401: GRRKNEDDTD MHLAKSIMQN KQYKTSNQAA DDEYEYGDAP SKKSRKRESS SNIPEKDNRV KRIMTQQERC LFCFENPKRP KHLVVSIANF TYLMLPQHQP
501: LVQGHCCILP MQHEAASRSV DDNVWDEIRN FKKCLIMMYA KEGKDAVFLE TVIGLSQQRR HCLIECIPIP QEIAKEGPLY FKKAIDEAES EWSQHNAKKL
601: IDTSVKGLRN SIPKNFPYFH VEFGLDKGFV HVIDDEQQFN SNLGLNVIRG MLELPEEDMY RRRRQESVES QKKAVATFAR EWEHFDWTKQ LD
Arabidopsis Description
CwfJ-like family protein [Source:UniProtKB/TrEMBL;Acc:Q93ZX4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.