Factsheet for Zm00001d051478_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d005791_P001	Maize	nucleus	100.0	100.0
Zm00001d042954_P001	Maize	nucleus	100.0	100.0
Zm00001d039733_P001	Maize	nucleus	100.0	100.0
Zm00001d027394_P001	Maize	nucleus	100.0	100.0
Zm00001d026015_P001	Maize	nucleus	100.0	100.0
Zm00001d021477_P001	Maize	nucleus	100.0	100.0
Zm00001d020585_P001	Maize	nucleus	100.0	100.0
Zm00001d020584_P001	Maize	nucleus	100.0	100.0
Zm00001d012439_P001	Maize	nucleus	100.0	100.0
Zm00001d010575_P001	Maize	nucleus	100.0	100.0
Zm00001d008669_P001	Maize	nucleus	100.0	100.0
AT3G53730.1	Thale cress	nucleus	100.0	100.0
Zm00001d002546_P001	Maize	nucleus	100.0	100.0
Zm00001d002543_P001	Maize	nucleus	100.0	100.0
TraesCSU01G142200.1	Wheat	nucleus	100.0	100.0
TraesCS1D01G290000.1	Wheat	nucleus	100.0	100.0
TraesCS1B01G221600.1	Wheat	nucleus	100.0	100.0
Os09t0553100-00	Rice	nucleus	100.0	100.0
KRH10345	Soybean	nucleus	100.0	100.0
CDX93616	Canola	nucleus	100.0	100.0
TraesCS7A01G178900.1	Wheat	nucleus	99.03	99.03
GSMUA_Achr10P...	Banana	nucleus	76.7	97.53
Bra018682.1-P	Field mustard	nucleus	96.12	96.12
HORVU2Hr1G093680.3	Barley	nucleus	100.0	83.06
Zm00001d021422_P001	Maize	plastid	98.06	73.72
Zm00001d013727_P001	Maize	cytosol, mitochondrion, nucleus	64.08	57.89
OQU89898	Sorghum	plastid	100.0	55.38
Zm00001d012668_P001	Maize	nucleus	62.14	52.46

Protein Annotations

Gene3D:1.10.20.10	EntrezGene:100192931	EntrezGene:100278340	EntrezGene:100282268	EntrezGene:103631010	EntrezGene:103634846
EntrezGene:103635780	EntrezGene:103636523	EntrezGene:103646024	EntrezGene:103646028	EntrezGene:103649716	EntrezGene:103651039
MapMan:12.1.5	ProteinID:AAA33474.1	ProteinID:AAA33475.1	ProteinID:AAA33476.1	ProteinID:AQK45299.1	ProteinID:AQK54299.1
ProteinID:AQK90411.1	ProteinID:AQK94391.1	ProteinID:AQK99537.1	UniProt:B4FD59	EMBL:BT035047	EMBL:BT035823
EMBL:BT037220	EMBL:BT037283	EMBL:BT038224	EMBL:BT038570	EMBL:BT038760	EMBL:BT039253
EMBL:BT041275	EMBL:BT042209	EMBL:BT043252	EMBL:BT068602	EMBL:BT086626	EMBL:BT086837
EMBL:BT087753	EMBL:BT087814	EMBL:BT087849	EMBL:BT088129	InterPro:CENP-T/H4_C	EMBL:EU952495
EMBL:EU952528	EMBL:EU952532	EMBL:EU952703	EMBL:EU952956	EMBL:EU953038	EMBL:EU953219
EMBL:EU953382	EMBL:EU958304	EMBL:EU958334	EMBL:EU958566	EMBL:EU958627	EMBL:EU958632
EMBL:EU958633	EMBL:EU958652	EMBL:EU958716	EMBL:EU958718	EMBL:EU958750	EMBL:EU958751
EMBL:EU958755	EMBL:EU958799	EMBL:EU958878	EMBL:EU958927	EMBL:EU958939	EMBL:EU959111
EMBL:EU959112	EMBL:EU959116	EMBL:EU959182	EMBL:EU959197	EMBL:EU959801	EMBL:EU960491
EMBL:EU961309	EMBL:EU962295	EMBL:EU962748	EMBL:EU963833	EMBL:EU963858	EMBL:EU963897
EMBL:EU964186	EMBL:EU964504	EMBL:EU964882	EMBL:EU965132	EMBL:EU965487	EMBL:EU965707
EMBL:EU966694	EMBL:EU967103	EMBL:EU976361	EMBL:EU976372	EMBL:EU976391	EMBL:EU976526
EMBL:EU976575	EMBL:EU977003	GO:GO:0000786	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005694	GO:GO:0005730	GO:GO:0005737	GO:GO:0005773	GO:GO:0005774	GO:GO:0005829
GO:GO:0005886	GO:GO:0006334	GO:GO:0006950	GO:GO:0008150	GO:GO:0009414	GO:GO:0009506
GO:GO:0009507	GO:GO:0009536	GO:GO:0009579	GO:GO:0009628	GO:GO:0009987	GO:GO:0016020
GO:GO:0016043	GO:GO:0046982	InterPro:Histone-fold	InterPro:Histone_H4	InterPro:Histone_H4_CS	InterPro:IPR009072
ProteinID:ONL93034.1	ProteinID:ONM14629.1	ProteinID:ONM14650.1	ProteinID:ONM22111.1	ProteinID:ONM29854.1	ProteinID:ONM36601.1
ProteinID:ONM55158.1	ProteinID:ONM55159.1	ProteinID:ONM57249.1	UniProt:P62787	PFAM:PF15511	PRINTS:PR00623
ScanProsite:PS00047	PANTHER:PTHR10484	PANTHER:PTHR10484:SF160	SMART:SM00417	SUPFAM:SSF47113	UniParc:UPI0000000084
EnsemblPlantsGene:Zm00001d051478	EnsemblPlants:Zm00001d051478_P001	EnsemblPlants:Zm00001d051478_T001	SEG:seg	:	:

Description

H4C7Histone H4

Coordinates

chr4:-:160007880..160008267

Molecular Weight (calculated)

11410.2 Da

IEP (calculated)

12.005

GRAVY (calculated)

-0.524

Length

103 amino acids

Sequence
(BLAST)

001: MSGRGKGGKG LGKGGAKRHR KVLRDNIQGI TKPAIRRLAR RGGVKRISGL IYEETRGVLK IFLENVIRDA VTYTEHARRK TVTAMDVVYA LKRQGRTLYG
101: FGG

Best Arabidopsis Sequence Match ( AT5G59970.2 )
(BLAST)

001: MSGRGKGGKG LGKGGAKRHR KVLRDNIQGI TKPAIRRLAR RGGVKRISGL IYEETRGVLK IFLENVIRDA VTYTEHARRK TVTAMDVVYA LKRQGRTLYG
101: FGG

Arabidopsis Description

Histone H4 [Source:UniProtKB/TrEMBL;Acc:A0A178VF54]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.