Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400078157 | Potato | nucleus | 50.0 | 87.69 |
| CDX71090 | Canola | nucleus | 28.95 | 82.5 |
| Zm00001d012668_P001 | Maize | nucleus | 80.7 | 75.41 |
| TraesCS2D01G469600.1 | Wheat | nucleus | 57.02 | 65.66 |
| Zm00001d008669_P001 | Maize | nucleus | 57.89 | 64.08 |
| Zm00001d051478_P001 | Maize | nucleus | 57.89 | 64.08 |
| Zm00001d042954_P001 | Maize | nucleus | 57.89 | 64.08 |
| Zm00001d039733_P001 | Maize | nucleus | 57.89 | 64.08 |
| Zm00001d027394_P001 | Maize | nucleus | 57.89 | 64.08 |
| Zm00001d026015_P001 | Maize | nucleus | 57.89 | 64.08 |
| Zm00001d021477_P001 | Maize | nucleus | 57.89 | 64.08 |
| Zm00001d020585_P001 | Maize | nucleus | 57.89 | 64.08 |
| Zm00001d020584_P001 | Maize | nucleus | 57.89 | 64.08 |
| Zm00001d012439_P001 | Maize | nucleus | 57.89 | 64.08 |
| Zm00001d010575_P001 | Maize | nucleus | 57.89 | 64.08 |
| Zm00001d005791_P001 | Maize | nucleus | 57.89 | 64.08 |
| Zm00001d002546_P001 | Maize | nucleus | 57.89 | 64.08 |
| Zm00001d002543_P001 | Maize | nucleus | 57.89 | 64.08 |
| TraesCSU01G121200.1 | Wheat | nucleus | 57.89 | 64.08 |
| TraesCS6B01G100200.1 | Wheat | nucleus | 57.89 | 64.08 |
| KRH67535 | Soybean | nucleus | 57.89 | 64.08 |
| KRH30348 | Soybean | nucleus | 57.89 | 64.08 |
| Solyc09g007590.1.1 | Tomato | nucleus | 38.6 | 63.77 |
| Solyc09g007610.1.1 | Tomato | nucleus | 37.72 | 62.32 |
| Zm00001d021422_P001 | Maize | plastid | 59.65 | 49.63 |
| HORVU1Hr1G080200.2 | Barley | plastid | 53.51 | 34.08 |
Protein Annotations
| Gene3D:1.10.20.10 | EntrezGene:103626054 | MapMan:12.1.5 | UniProt:A0A1D6GLQ7 | ProteinID:AQK64245.1 | GO:GO:0000786 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005694 | GO:GO:0006334 | GO:GO:0008150 |
| GO:GO:0009987 | GO:GO:0016043 | GO:GO:0046982 | InterPro:Histone-fold | InterPro:Histone_H4 | InterPro:IPR009072 |
| PRINTS:PR00623 | PANTHER:PTHR10484 | PANTHER:PTHR10484:SF160 | SMART:SM00417 | SUPFAM:SSF47113 | UniParc:UPI0004DE82E1 |
| EnsemblPlantsGene:Zm00001d013727 | EnsemblPlants:Zm00001d013727_P001 | EnsemblPlants:Zm00001d013727_T001 | SEG:seg | : | : |
Description
Histone H4
Coordinates
chr5:-:18698615..18702973
Molecular Weight (calculated)
12503.8 Da
IEP (calculated)
12.464
GRAVY (calculated)
-0.268
Length
114 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGRGKGGKG LGKGGALRHR KVLRDNIPGI TNLAIRRLAR RGGVKRISGL IYEETRGVLK IFLEQCCWFR GSSRAHPARP PRSVAMAQCR HHLLLMVIAA
101: PRQARAMGKP LLSS
101: PRQARAMGKP LLSS
001: MSGRGKGGKG LGKGGAKRHR KVLRDNIQGI TKPAIRRLAR RGGVKRISGL IYEETRGVLK IFLENVIRDA VTYTEHARRK TVTAMDVVYA LKRQGRTLYG
101: FGG
101: FGG
Arabidopsis Description
Histone H4 [Source:UniProtKB/TrEMBL;Acc:A0A178VF54]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.