Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT3G53730.1 | Thale cress | nucleus | 83.06 | 100.0 |
| HORVU2Hr1G098320.1 | Barley | nucleus | 83.06 | 100.0 |
| HORVU6Hr1G011710.1 | Barley | nucleus | 83.06 | 100.0 |
| HORVU6Hr1G066400.1 | Barley | nucleus | 83.06 | 100.0 |
| HORVU1Hr1G073680.1 | Barley | nucleus | 83.06 | 100.0 |
| KRH10345 | Soybean | nucleus | 83.06 | 100.0 |
| Os09t0553100-00 | Rice | nucleus | 83.06 | 100.0 |
| TraesCS1B01G221600.1 | Wheat | nucleus | 83.06 | 100.0 |
| TraesCS1D01G290000.1 | Wheat | nucleus | 83.06 | 100.0 |
| HORVU1Hr1G066960.1 | Barley | nucleus | 83.06 | 100.0 |
| TraesCSU01G142200.1 | Wheat | nucleus | 83.06 | 100.0 |
| HORVU1Hr1G022390.1 | Barley | nucleus | 83.06 | 100.0 |
| HORVU1Hr1G020060.1 | Barley | nucleus | 83.06 | 100.0 |
| HORVU1Hr1G020040.1 | Barley | nucleus | 83.06 | 100.0 |
| Zm00001d051478_P001 | Maize | nucleus | 83.06 | 100.0 |
| CDX79740 | Canola | nucleus | 83.06 | 100.0 |
| TraesCS7A01G178900.1 | Wheat | nucleus | 82.26 | 99.03 |
| GSMUA_Achr10P... | Banana | nucleus | 63.71 | 97.53 |
| Bra018682.1-P | Field mustard | nucleus | 79.84 | 96.12 |
| HORVU3Hr1G087170.1 | Barley | nucleus, plasma membrane | 87.9 | 90.83 |
| HORVU7Hr1G114720.1 | Barley | nucleus | 75.0 | 90.29 |
| HORVU7Hr1G114740.1 | Barley | nucleus | 75.0 | 89.42 |
| HORVU1Hr1G071760.1 | Barley | nucleus, plastid | 86.29 | 85.6 |
| HORVU6Hr1G011540.1 | Barley | nucleus, plastid | 85.48 | 84.8 |
| HORVU1Hr1G017830.1 | Barley | nucleus | 86.29 | 84.25 |
| HORVU6Hr1G011780.1 | Barley | nucleus | 84.68 | 83.33 |
| HORVU2Hr1G098340.4 | Barley | nucleus | 86.29 | 82.95 |
| HORVU3Hr1G088160.1 | Barley | nucleus | 85.48 | 82.81 |
| HORVU1Hr1G029090.2 | Barley | nucleus | 87.9 | 82.58 |
| HORVU1Hr1G070700.1 | Barley | nucleus, plastid | 84.68 | 81.4 |
| HORVU2Hr1G040050.1 | Barley | nucleus | 66.94 | 80.58 |
| HORVU1Hr1G071210.4 | Barley | nucleus | 86.29 | 80.45 |
| HORVU5Hr1G086630.1 | Barley | nucleus | 83.06 | 79.84 |
| HORVU7Hr1G100410.1 | Barley | nucleus | 82.26 | 79.69 |
| HORVU1Hr1G079440.1 | Barley | nucleus, plastid | 83.87 | 79.39 |
| HORVU5Hr1G079130.1 | Barley | nucleus | 84.68 | 78.95 |
| HORVU6Hr1G029210.3 | Barley | nucleus, plastid | 83.06 | 75.74 |
| HORVU7Hr1G043300.1 | Barley | nucleus | 83.87 | 75.36 |
| HORVU6Hr1G011510.1 | Barley | nucleus, plastid | 83.87 | 73.76 |
| HORVU3Hr1G023460.1 | Barley | nucleus | 82.26 | 72.86 |
| HORVU4Hr1G063260.2 | Barley | nucleus | 81.45 | 72.66 |
| HORVU1Hr1G071190.2 | Barley | nucleus, plastid | 84.68 | 71.92 |
| HORVU2Hr1G097990.1 | Barley | nucleus, plastid | 85.48 | 69.74 |
| HORVU1Hr1G052030.2 | Barley | nucleus, plastid | 84.68 | 69.54 |
| HORVU6Hr1G013530.1 | Barley | nucleus, plastid | 83.87 | 69.33 |
| HORVU5Hr1G087870.1 | Barley | nucleus, plastid | 83.06 | 68.67 |
| HORVU4Hr1G023200.1 | Barley | nucleus | 83.06 | 62.8 |
| HORVU5Hr1G087830.1 | Barley | nucleus | 85.48 | 62.72 |
| HORVU2Hr1G106590.1 | Barley | nucleus, plastid | 66.94 | 58.45 |
| HORVU2Hr1G099490.1 | Barley | nucleus, plastid | 83.87 | 58.1 |
| HORVU6Hr1G011030.1 | Barley | nucleus | 54.84 | 57.63 |
| OQU89898 | Sorghum | plastid | 85.48 | 56.99 |
| HORVU5Hr1G086620.4 | Barley | nucleus | 82.26 | 55.74 |
| HORVU1Hr1G090300.44 | Barley | nucleus | 85.48 | 54.92 |
| HORVU6Hr1G011020.1 | Barley | nucleus, plastid | 80.65 | 51.02 |
| HORVU1Hr1G080200.2 | Barley | plastid | 56.45 | 39.11 |
Protein Annotations
| Gene3D:1.10.20.10 | MapMan:12.1.5 | UniProt:A0A287IZC1 | InterPro:CENP-T/H4_C | GO:GO:0000786 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005694 | GO:GO:0006334 | GO:GO:0008150 | GO:GO:0009987 |
| GO:GO:0016043 | GO:GO:0046982 | EnsemblPlantsGene:HORVU2Hr1G093680 | EnsemblPlants:HORVU2Hr1G093680.3 | InterPro:Histone-fold | InterPro:Histone_H4 |
| InterPro:Histone_H4_CS | InterPro:IPR009072 | PFAM:PF15511 | PRINTS:PR00623 | ScanProsite:PS00047 | PANTHER:PTHR10484 |
| PANTHER:PTHR10484:SF160 | SMART:SM00417 | SUPFAM:SSF47113 | UniParc:UPI000B475A2A | SEG:seg | : |
Description
Histone H4 [Source:UniProtKB/TrEMBL;Acc:A0A287IZC1]
Coordinates
chrchr2H:+:659202186..659202995
Molecular Weight (calculated)
13653.9 Da
IEP (calculated)
11.881
GRAVY (calculated)
-0.441
Length
124 amino acids
Sequence
(BLAST)
(BLAST)
001: KLQHHFLFPP TTPLSELGGA AMSGRGKGGK GLGKGGAKRH RKVLRDNIQG ITKPAIRRLA RRGGVKRISG LIYEETRGVL KIFLENVIRD AVTYTEHARR
101: KTVTAMDVVY ALKRQGRTLY GFGG
101: KTVTAMDVVY ALKRQGRTLY GFGG
001: MSGRGKGGKG LGKGGAKRHR KVLRDNIQGI TKPAIRRLAR RGGVKRISGL IYEETRGVLK IFLENVIRDA VTYTEHARRK TVTAMDVVYA LKRQGRTLYG
101: FGG
101: FGG
Arabidopsis Description
Histone H4 [Source:UniProtKB/TrEMBL;Acc:A0A178VF54]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.