Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU1Hr1G020040.1 | Barley | nucleus | 81.75 | 100.0 |
| Zm00001d027394_P001 | Maize | nucleus | 81.75 | 100.0 |
| Zm00001d002543_P001 | Maize | nucleus | 81.75 | 100.0 |
| VIT_13s0067g03650.t01 | Wine grape | nucleus | 81.75 | 100.0 |
| TraesCS6B01G084300.1 | Wheat | nucleus | 81.75 | 100.0 |
| Solyc11g066160.1.1 | Tomato | nucleus | 81.75 | 100.0 |
| Os04t0583600-01 | Rice | nucleus | 81.75 | 100.0 |
| KRH30344 | Soybean | nucleus | 81.75 | 100.0 |
| HORVU6Hr1G066400.1 | Barley | nucleus | 81.75 | 100.0 |
| HORVU6Hr1G011710.1 | Barley | nucleus | 81.75 | 100.0 |
| HORVU2Hr1G098320.1 | Barley | nucleus | 81.75 | 100.0 |
| HORVU1Hr1G073680.1 | Barley | nucleus | 81.75 | 100.0 |
| HORVU1Hr1G020060.1 | Barley | nucleus | 81.75 | 100.0 |
| HORVU1Hr1G022390.1 | Barley | nucleus | 81.75 | 100.0 |
| HORVU1Hr1G066960.1 | Barley | nucleus | 81.75 | 100.0 |
| HORVU7Hr1G114720.1 | Barley | nucleus | 73.81 | 90.29 |
| HORVU7Hr1G114740.1 | Barley | nucleus | 73.81 | 89.42 |
| HORVU7Hr1G100410.1 | Barley | nucleus | 88.89 | 87.5 |
| HORVU3Hr1G087170.1 | Barley | nucleus, plasma membrane | 82.54 | 86.67 |
| HORVU1Hr1G071760.1 | Barley | nucleus, plastid | 85.71 | 86.4 |
| HORVU1Hr1G017830.1 | Barley | nucleus | 85.71 | 85.04 |
| HORVU2Hr1G093680.3 | Barley | nucleus | 83.33 | 84.68 |
| HORVU6Hr1G011540.1 | Barley | nucleus, plastid | 83.33 | 84.0 |
| HORVU6Hr1G011510.1 | Barley | nucleus, plastid | 92.86 | 82.98 |
| HORVU1Hr1G070700.1 | Barley | nucleus, plastid | 84.92 | 82.95 |
| HORVU2Hr1G098340.4 | Barley | nucleus | 84.92 | 82.95 |
| HORVU1Hr1G071210.4 | Barley | nucleus | 86.51 | 81.95 |
| HORVU1Hr1G079440.1 | Barley | nucleus, plastid | 84.13 | 80.92 |
| HORVU6Hr1G029210.3 | Barley | nucleus, plastid | 87.3 | 80.88 |
| HORVU2Hr1G040050.1 | Barley | nucleus | 65.87 | 80.58 |
| HORVU3Hr1G088160.1 | Barley | nucleus | 81.75 | 80.47 |
| HORVU5Hr1G086630.1 | Barley | nucleus | 81.75 | 79.84 |
| HORVU1Hr1G029090.2 | Barley | nucleus | 82.54 | 78.79 |
| HORVU5Hr1G079130.1 | Barley | nucleus | 80.95 | 76.69 |
| HORVU7Hr1G043300.1 | Barley | nucleus | 83.33 | 76.09 |
| HORVU3Hr1G023460.1 | Barley | nucleus | 83.33 | 75.0 |
| HORVU4Hr1G063260.2 | Barley | nucleus | 80.16 | 72.66 |
| HORVU6Hr1G013530.1 | Barley | nucleus, plastid | 85.71 | 72.0 |
| HORVU1Hr1G052030.2 | Barley | nucleus, plastid | 84.92 | 70.86 |
| HORVU1Hr1G071190.2 | Barley | nucleus, plastid | 81.75 | 70.55 |
| HORVU5Hr1G087870.1 | Barley | nucleus, plastid | 81.75 | 68.67 |
| HORVU2Hr1G097990.1 | Barley | nucleus, plastid | 82.54 | 68.42 |
| HORVU5Hr1G087830.1 | Barley | nucleus | 84.13 | 62.72 |
| HORVU4Hr1G023200.1 | Barley | nucleus | 80.16 | 61.59 |
| HORVU2Hr1G106590.1 | Barley | nucleus, plastid | 65.87 | 58.45 |
| HORVU2Hr1G099490.1 | Barley | nucleus, plastid | 82.54 | 58.1 |
| HORVU6Hr1G011030.1 | Barley | nucleus | 53.17 | 56.78 |
| HORVU5Hr1G086620.4 | Barley | nucleus | 80.16 | 55.19 |
| HORVU1Hr1G090300.44 | Barley | nucleus | 81.75 | 53.37 |
| HORVU6Hr1G011020.1 | Barley | nucleus, plastid | 80.16 | 51.53 |
| HORVU1Hr1G080200.2 | Barley | plastid | 56.35 | 39.66 |
Protein Annotations
| Gene3D:1.10.20.10 | MapMan:12.1.5 | UniProt:A0A287TBB5 | InterPro:CENP-T/H4_C | GO:GO:0000786 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005694 | GO:GO:0006334 | GO:GO:0008150 | GO:GO:0009987 |
| GO:GO:0016043 | GO:GO:0046982 | EnsemblPlantsGene:HORVU6Hr1G011780 | EnsemblPlants:HORVU6Hr1G011780.1 | InterPro:Histone-fold | InterPro:Histone_H4 |
| InterPro:Histone_H4_CS | InterPro:IPR009072 | PFAM:PF15511 | PRINTS:PR00623 | ScanProsite:PS00047 | PANTHER:PTHR10484 |
| PANTHER:PTHR10484:SF160 | SMART:SM00417 | SUPFAM:SSF47113 | UniParc:UPI000B462366 | SEG:seg | : |
Description
Histone H4 [Source:UniProtKB/TrEMBL;Acc:A0A287TBB5]
Coordinates
chrchr6H:-:21802795..21803839
Molecular Weight (calculated)
14046.3 Da
IEP (calculated)
12.243
GRAVY (calculated)
-0.601
Length
126 amino acids
Sequence
(BLAST)
(BLAST)
001: FLPTSSRRHH LHLSQLQGRK PSAMSGRGKG GKGLGKGGAK RHRKVLRDNI QGITKPAIRR LARRGGVKRI SGLIYEETRG VLKIFLENVI RDAVTYTEHA
101: RRKTVTAMDV VYALKRQGRT LYGFGG
101: RRKTVTAMDV VYALKRQGRT LYGFGG
001: MSGRGKGGKG LGKGGAKRHR KVLRDNIQGI TKPAIRRLAR RGGVKRISGL IYEETRGVLK IFLENVIRDA VTYTEHARRK TVTAMDVVYA LKRQGRTLYG
101: FGG
101: FGG
Arabidopsis Description
Histone H4 [Source:UniProtKB/TrEMBL;Acc:A0A178VF54]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.