Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU1Hr1G020040.1 | Barley | nucleus | 57.04 | 78.64 |
| TraesCSU01G121200.1 | Wheat | nucleus | 57.04 | 78.64 |
| TraesCS6B01G100200.1 | Wheat | nucleus | 57.04 | 78.64 |
| KRH67535 | Soybean | nucleus | 57.04 | 78.64 |
| KRH30348 | Soybean | nucleus | 57.04 | 78.64 |
| HORVU6Hr1G066400.1 | Barley | nucleus | 57.04 | 78.64 |
| HORVU6Hr1G011710.1 | Barley | nucleus | 57.04 | 78.64 |
| HORVU2Hr1G098320.1 | Barley | nucleus | 57.04 | 78.64 |
| HORVU1Hr1G073680.1 | Barley | nucleus | 57.04 | 78.64 |
| HORVU1Hr1G020060.1 | Barley | nucleus | 57.04 | 78.64 |
| HORVU1Hr1G022390.1 | Barley | nucleus | 57.04 | 78.64 |
| HORVU1Hr1G066960.1 | Barley | nucleus | 57.04 | 78.64 |
| HORVU7Hr1G114720.1 | Barley | nucleus | 52.11 | 71.84 |
| HORVU7Hr1G114740.1 | Barley | nucleus | 52.11 | 71.15 |
| HORVU1Hr1G071760.1 | Barley | nucleus, plastid | 61.27 | 69.6 |
| HORVU3Hr1G087170.1 | Barley | nucleus, plasma membrane | 58.45 | 69.17 |
| HORVU1Hr1G017830.1 | Barley | nucleus | 61.27 | 68.5 |
| HORVU7Hr1G100410.1 | Barley | nucleus | 61.27 | 67.97 |
| HORVU6Hr1G011540.1 | Barley | nucleus, plastid | 59.15 | 67.2 |
| HORVU2Hr1G093680.3 | Barley | nucleus | 58.45 | 66.94 |
| HORVU2Hr1G040050.1 | Barley | nucleus | 47.89 | 66.02 |
| HORVU6Hr1G011780.1 | Barley | nucleus | 58.45 | 65.87 |
| HORVU1Hr1G070700.1 | Barley | nucleus, plastid | 59.15 | 65.12 |
| HORVU2Hr1G098340.4 | Barley | nucleus | 59.15 | 65.12 |
| HORVU1Hr1G071210.4 | Barley | nucleus | 59.86 | 63.91 |
| HORVU7Hr1G043300.1 | Barley | nucleus | 61.97 | 63.77 |
| HORVU5Hr1G086630.1 | Barley | nucleus | 57.75 | 63.57 |
| HORVU1Hr1G079440.1 | Barley | nucleus, plastid | 58.45 | 63.36 |
| HORVU3Hr1G088160.1 | Barley | nucleus | 57.04 | 63.28 |
| HORVU5Hr1G079130.1 | Barley | nucleus | 59.15 | 63.16 |
| HORVU1Hr1G029090.2 | Barley | nucleus | 58.45 | 62.88 |
| HORVU6Hr1G029210.3 | Barley | nucleus, plastid | 59.15 | 61.76 |
| HORVU6Hr1G011510.1 | Barley | nucleus, plastid | 61.27 | 61.7 |
| HORVU3Hr1G023460.1 | Barley | nucleus | 59.86 | 60.71 |
| HORVU1Hr1G052030.2 | Barley | nucleus, plastid | 62.68 | 58.94 |
| HORVU1Hr1G071190.2 | Barley | nucleus, plastid | 60.56 | 58.9 |
| HORVU4Hr1G063260.2 | Barley | nucleus | 57.04 | 58.27 |
| HORVU5Hr1G087870.1 | Barley | nucleus, plastid | 60.56 | 57.33 |
| HORVU6Hr1G013530.1 | Barley | nucleus, plastid | 58.45 | 55.33 |
| HORVU2Hr1G097990.1 | Barley | nucleus, plastid | 59.15 | 55.26 |
| HORVU5Hr1G087830.1 | Barley | nucleus | 64.79 | 54.44 |
| HORVU6Hr1G011030.1 | Barley | nucleus | 45.07 | 54.24 |
| HORVU4Hr1G023200.1 | Barley | nucleus | 60.56 | 52.44 |
| HORVU5Hr1G086620.4 | Barley | nucleus | 64.08 | 49.73 |
| HORVU2Hr1G099490.1 | Barley | nucleus, plastid | 61.97 | 49.16 |
| HORVU6Hr1G011020.1 | Barley | nucleus, plastid | 61.27 | 44.39 |
| HORVU1Hr1G080200.2 | Barley | plastid | 54.93 | 43.58 |
| HORVU1Hr1G090300.44 | Barley | nucleus | 59.15 | 43.52 |
Protein Annotations
| Gene3D:1.10.20.10 | MapMan:12.1.5 | UniProt:A0A287JC73 | GO:GO:0000786 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005694 | GO:GO:0006334 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 |
| GO:GO:0046982 | EnsemblPlantsGene:HORVU2Hr1G106590 | EnsemblPlants:HORVU2Hr1G106590.1 | InterPro:Histone-fold | InterPro:Histone_H4 | InterPro:Histone_H4_CS |
| InterPro:IPR009072 | PRINTS:PR00623 | ScanProsite:PS00047 | PANTHER:PTHR10484 | PANTHER:PTHR10484:SF160 | SMART:SM00417 |
| SUPFAM:SSF47113 | UniParc:UPI000B462A43 | SEG:seg | : | : | : |
Description
Histone H4 [Source:UniProtKB/TrEMBL;Acc:A0A287JC73]
Coordinates
chrchr2H:+:709782321..709782749
Molecular Weight (calculated)
15307.7 Da
IEP (calculated)
12.563
GRAVY (calculated)
-0.500
Length
142 amino acids
Sequence
(BLAST)
(BLAST)
001: HLGSRSRPSI FVRIQRQAAP SSLVKSPFGS HSRAAAAATT APPPLPSKIH STPSARGSTI MSGRGKGGKG LGKGGAKRHR KVLRDNIQGI TKPAIRRLAR
101: RGGVKRISGL IYEETRGVLK IFLENVIRDA VTYTEHARRK TV
101: RGGVKRISGL IYEETRGVLK IFLENVIRDA VTYTEHARRK TV
001: MSGRGKGGKG LGKGGAKRHR KVLRDNIQGI TKPAIRRLAR RGGVKRISGL IYEETRGVLK IFLENVIRDA VTYTEHARRK TVTAMDVVYA LKRQGRTLYG
101: FGG
101: FGG
Arabidopsis Description
Histone H4 [Source:UniProtKB/TrEMBL;Acc:A0A178VF54]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.