Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU1Hr1G020040.1 | Barley | nucleus | 73.91 | 99.03 |
| Solyc11g066160.1.1 | Tomato | nucleus | 73.91 | 99.03 |
| Os02t0684500-00 | Rice | nucleus | 73.91 | 99.03 |
| HORVU6Hr1G066400.1 | Barley | nucleus | 73.91 | 99.03 |
| HORVU6Hr1G011710.1 | Barley | nucleus | 73.91 | 99.03 |
| HORVU2Hr1G098320.1 | Barley | nucleus | 73.91 | 99.03 |
| HORVU1Hr1G073680.1 | Barley | nucleus | 73.91 | 99.03 |
| HORVU1Hr1G066960.1 | Barley | nucleus | 73.91 | 99.03 |
| HORVU1Hr1G020060.1 | Barley | nucleus | 73.91 | 99.03 |
| HORVU1Hr1G022390.1 | Barley | nucleus | 73.91 | 99.03 |
| HORVU7Hr1G114720.1 | Barley | nucleus | 66.67 | 89.32 |
| HORVU7Hr1G114740.1 | Barley | nucleus | 66.67 | 88.46 |
| HORVU3Hr1G087170.1 | Barley | nucleus, plasma membrane | 76.81 | 88.33 |
| HORVU1Hr1G071760.1 | Barley | nucleus, plastid | 77.54 | 85.6 |
| HORVU1Hr1G017830.1 | Barley | nucleus | 77.54 | 84.25 |
| HORVU2Hr1G093680.3 | Barley | nucleus | 75.36 | 83.87 |
| HORVU3Hr1G088160.1 | Barley | nucleus | 77.54 | 83.59 |
| HORVU6Hr1G011780.1 | Barley | nucleus | 76.09 | 83.33 |
| HORVU1Hr1G079440.1 | Barley | nucleus, plastid | 78.99 | 83.21 |
| HORVU6Hr1G011540.1 | Barley | nucleus, plastid | 75.36 | 83.2 |
| HORVU1Hr1G070700.1 | Barley | nucleus, plastid | 77.54 | 82.95 |
| HORVU2Hr1G040050.1 | Barley | nucleus | 60.87 | 81.55 |
| HORVU2Hr1G098340.4 | Barley | nucleus | 76.09 | 81.4 |
| HORVU1Hr1G071210.4 | Barley | nucleus | 78.26 | 81.2 |
| HORVU5Hr1G086630.1 | Barley | nucleus | 75.36 | 80.62 |
| HORVU7Hr1G100410.1 | Barley | nucleus | 74.64 | 80.47 |
| HORVU1Hr1G029090.2 | Barley | nucleus | 76.81 | 80.3 |
| HORVU5Hr1G079130.1 | Barley | nucleus | 76.09 | 78.95 |
| HORVU6Hr1G029210.3 | Barley | nucleus, plastid | 77.54 | 78.68 |
| HORVU3Hr1G023460.1 | Barley | nucleus | 78.99 | 77.86 |
| HORVU6Hr1G011510.1 | Barley | nucleus, plastid | 76.09 | 74.47 |
| HORVU4Hr1G063260.2 | Barley | nucleus | 73.91 | 73.38 |
| HORVU1Hr1G071190.2 | Barley | nucleus, plastid | 77.54 | 73.29 |
| HORVU6Hr1G013530.1 | Barley | nucleus, plastid | 76.81 | 70.67 |
| HORVU1Hr1G052030.2 | Barley | nucleus, plastid | 76.81 | 70.2 |
| HORVU5Hr1G087870.1 | Barley | nucleus, plastid | 75.36 | 69.33 |
| HORVU2Hr1G097990.1 | Barley | nucleus, plastid | 76.09 | 69.08 |
| HORVU5Hr1G087830.1 | Barley | nucleus | 78.99 | 64.5 |
| HORVU4Hr1G023200.1 | Barley | nucleus | 75.36 | 63.41 |
| HORVU2Hr1G106590.1 | Barley | nucleus, plastid | 63.77 | 61.97 |
| HORVU5Hr1G086620.4 | Barley | nucleus | 77.54 | 58.47 |
| HORVU2Hr1G099490.1 | Barley | nucleus, plastid | 75.36 | 58.1 |
| HORVU6Hr1G011030.1 | Barley | nucleus | 49.28 | 57.63 |
| HORVU6Hr1G011020.1 | Barley | nucleus, plastid | 79.71 | 56.12 |
| HORVU1Hr1G090300.44 | Barley | nucleus | 74.64 | 53.37 |
| HORVU1Hr1G080200.2 | Barley | plastid | 51.45 | 39.66 |
Protein Annotations
| Gene3D:1.10.20.10 | MapMan:12.1.5 | UniProt:A0A287W955 | InterPro:CENP-T/H4_C | GO:GO:0000786 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005694 | GO:GO:0006334 | GO:GO:0008150 | GO:GO:0009987 |
| GO:GO:0016043 | GO:GO:0046982 | EnsemblPlantsGene:HORVU7Hr1G043300 | EnsemblPlants:HORVU7Hr1G043300.1 | InterPro:Histone-fold | InterPro:Histone_H4 |
| InterPro:Histone_H4_CS | InterPro:IPR009072 | PFAM:PF15511 | PRINTS:PR00623 | ScanProsite:PS00047 | PANTHER:PTHR10484 |
| PANTHER:PTHR10484:SF160 | SMART:SM00417 | SUPFAM:SSF47113 | UniParc:UPI000B46ACAA | SEG:seg | : |
Description
Histone H4 [Source:UniProtKB/TrEMBL;Acc:A0A287W955]
Coordinates
chrchr7H:+:130413936..130414812
Molecular Weight (calculated)
15326.6 Da
IEP (calculated)
12.088
GRAVY (calculated)
-0.776
Length
138 amino acids
Sequence
(BLAST)
(BLAST)
001: PHGRHHRPHH TAATTITHAS QVKRRSSPER EEASAMSGRG KGGKGLGKGG AKRHRKVLRD NIQGITKPAI RRLARRGGVK RISGLIYEET RGVLKIFLEN
101: VIRDAVTYTE HARRKTVTAM DVVYALKRQG RTLYGFGG
101: VIRDAVTYTE HARRKTVTAM DVVYALKRQG RTLYGFGG
001: MSGRGKGGKG LGKGGAKRHR KVLRDNIQGI TKPAIRRLAR RGGVKRISGL IYEETRGVLK IFLENVIRDA VTYTEHARRK TVTAMDVVYA LKRQGRTLYG
101: FGG
101: FGG
Arabidopsis Description
Histone H4 [Source:UniProtKB/TrEMBL;Acc:A0A178VF54]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.