Factsheet for HORVU2Hr1G040050.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	nucleus
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G212700.1	Wheat	nucleus	82.52	82.52
TraesCS2A01G203000.1	Wheat	nucleus	81.55	82.35
TraesCS2B01G230100.1	Wheat	nucleus	81.55	81.55
Solyc11g072840.1.1	Tomato	nucleus	81.55	81.55
HORVU6Hr1G066400.1	Barley	nucleus	80.58	80.58
HORVU6Hr1G011710.1	Barley	nucleus	80.58	80.58
PGSC0003DMT400007674	Potato	nucleus	80.58	80.58
PGSC0003DMT400022438	Potato	nucleus	80.58	80.58
PGSC0003DMT400040121	Potato	nucleus	80.58	80.58
PGSC0003DMT400040182	Potato	nucleus	80.58	80.58
PGSC0003DMT400060471	Potato	nucleus	80.58	80.58
PGSC0003DMT400060472	Potato	nucleus	80.58	80.58
PGSC0003DMT400071314	Potato	nucleus	80.58	80.58
PGSC0003DMT400078154	Potato	nucleus	80.58	80.58
PGSC0003DMT400078155	Potato	nucleus	80.58	80.58
PGSC0003DMT400078156	Potato	nucleus	80.58	80.58
PGSC0003DMT400097008	Potato	nucleus	80.58	80.58
Solyc04g011390.1.1	Tomato	nucleus	80.58	80.58
Solyc05g054610.1.1	Tomato	nucleus	80.58	80.58
Solyc06g005420.1.1	Tomato	nucleus	80.58	80.58
Solyc06g005430.1.1	Tomato	nucleus	80.58	80.58
Solyc06g072240.1.1	Tomato	nucleus	80.58	80.58
Solyc06g075830.1.1	Tomato	nucleus	80.58	80.58
Solyc06g075850.1.1	Tomato	nucleus	80.58	80.58
Solyc06g075930.1.1	Tomato	nucleus	80.58	80.58
Solyc06g075960.1.1	Tomato	nucleus	80.58	80.58
Solyc11g072860.1.1	Tomato	nucleus	80.58	80.58
HORVU1Hr1G020040.1	Barley	nucleus	80.58	80.58
HORVU1Hr1G020060.1	Barley	nucleus	80.58	80.58
HORVU1Hr1G022390.1	Barley	nucleus	80.58	80.58
HORVU1Hr1G066960.1	Barley	nucleus	80.58	80.58
HORVU1Hr1G073680.1	Barley	nucleus	80.58	80.58
HORVU2Hr1G098320.1	Barley	nucleus	80.58	80.58
KRH05033	Soybean	endoplasmic reticulum	79.61	79.61
HORVU7Hr1G114740.1	Barley	nucleus	73.79	73.08
HORVU7Hr1G114720.1	Barley	nucleus	71.84	71.84
HORVU3Hr1G087170.1	Barley	nucleus, plasma membrane	80.58	69.17
HORVU1Hr1G071760.1	Barley	nucleus, plastid	81.55	67.2
HORVU2Hr1G093680.3	Barley	nucleus	80.58	66.94
HORVU7Hr1G100410.1	Barley	nucleus	82.52	66.41
HORVU6Hr1G011540.1	Barley	nucleus, plastid	80.58	66.4
HORVU5Hr1G086630.1	Barley	nucleus	82.52	65.89
HORVU6Hr1G011780.1	Barley	nucleus	80.58	65.87
HORVU3Hr1G088160.1	Barley	nucleus	81.55	65.62
HORVU1Hr1G017830.1	Barley	nucleus	80.58	65.35
HORVU1Hr1G070700.1	Barley	nucleus, plastid	80.58	64.34
HORVU2Hr1G098340.4	Barley	nucleus	80.58	64.34
HORVU5Hr1G079130.1	Barley	nucleus	82.52	63.91
HORVU1Hr1G079440.1	Barley	nucleus, plastid	80.58	63.36
HORVU1Hr1G029090.2	Barley	nucleus	80.58	62.88
HORVU1Hr1G071210.4	Barley	nucleus	80.58	62.41
HORVU4Hr1G063260.2	Barley	nucleus	82.52	61.15
HORVU6Hr1G029210.3	Barley	nucleus, plastid	80.58	61.03
HORVU7Hr1G043300.1	Barley	nucleus	81.55	60.87
HORVU3Hr1G023460.1	Barley	nucleus	82.52	60.71
HORVU6Hr1G011510.1	Barley	nucleus, plastid	80.58	58.87
HORVU1Hr1G071190.2	Barley	nucleus, plastid	81.55	57.53
HORVU2Hr1G097990.1	Barley	nucleus, plastid	82.52	55.92
HORVU6Hr1G013530.1	Barley	nucleus, plastid	80.58	55.33
HORVU5Hr1G087870.1	Barley	nucleus, plastid	80.58	55.33
HORVU1Hr1G052030.2	Barley	nucleus, plastid	80.58	54.97
HORVU4Hr1G023200.1	Barley	nucleus	82.52	51.83
HORVU6Hr1G011030.1	Barley	nucleus	57.28	50.0
HORVU5Hr1G087830.1	Barley	nucleus	80.58	49.11
HORVU2Hr1G106590.1	Barley	nucleus, plastid	66.02	47.89
HORVU5Hr1G086620.4	Barley	nucleus	82.52	46.45
HORVU2Hr1G099490.1	Barley	nucleus, plastid	80.58	46.37
HORVU6Hr1G011020.1	Barley	nucleus, plastid	83.5	43.88
HORVU1Hr1G090300.44	Barley	nucleus	80.58	43.01
HORVU1Hr1G080200.2	Barley	plastid	56.31	32.4

Protein Annotations

Gene3D:1.10.20.10	MapMan:12.1.5	UniProt:A0A287HSP5	InterPro:CENP-T/H4_C	GO:GO:0000786	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005694	GO:GO:0046982	EnsemblPlantsGene:HORVU2Hr1G040050	EnsemblPlants:HORVU2Hr1G040050.1
InterPro:Histone-fold	InterPro:Histone_H4	InterPro:IPR009072	PFAM:PF15511	PRINTS:PR00623	PANTHER:PTHR10484
PANTHER:PTHR10484:SF160	SMART:SM00417	SUPFAM:SSF47113	UniParc:UPI000B47C62B	SEG:seg	:

Description

Histone H4 [Source:UniProtKB/TrEMBL;Acc:A0A287HSP5]

Coordinates

chrchr2H:+:193780475..193781134

Molecular Weight (calculated)

11778.7 Da

IEP (calculated)

11.977

GRAVY (calculated)

-0.398

Length

103 amino acids

Sequence
(BLAST)

001: MSGRGKGAKG LGKGGFKRHR KILRENIYGI TKPAIRRLAR RGGVKRISGI VYEETRVVLK LFLEHVIRDV VVYTQHARRK TVIATDVVYA LKRQGRTLYG
101: FDR

Best Arabidopsis Sequence Match ( AT1G07660.1 )
(BLAST)

001: MSGRGKGGKG LGKGGAKRHR KVLRDNIQGI TKPAIRRLAR RGGVKRISGL IYEETRGVLK IFLENVIRDA VTYTEHARRK TVTAMDVVYA LKRQGRTLYG
101: FGG

Arabidopsis Description

Histone H4 [Source:UniProtKB/TrEMBL;Acc:A0A178VF54]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.