Factsheet for TraesCS2A01G203000.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G230100.1	Wheat	nucleus	100.0	99.03
TraesCS2D01G212700.1	Wheat	nucleus	97.06	96.12
TraesCS2A01G469400.1	Wheat	nucleus	86.27	85.44
TraesCS5A01G347900.1	Wheat	nucleus	86.27	85.44
TraesCS5A01G299500.1	Wheat	nucleus	86.27	85.44
TraesCS4A01G067800.1	Wheat	nucleus	86.27	85.44
TraesCS3A01G354300.1	Wheat	nucleus	86.27	85.44
TraesCS3A01G347200.1	Wheat	nucleus	86.27	85.44
TraesCS3A01G133900.1	Wheat	nucleus	86.27	85.44
TraesCS5A01G348000.1	Wheat	nucleus	86.27	85.44
TraesCS2A01G417700.1	Wheat	nucleus	86.27	85.44
TraesCS2A01G417600.1	Wheat	nucleus	86.27	85.44
TraesCS2A01G416300.1	Wheat	nucleus	86.27	85.44
TraesCS2A01G393600.1	Wheat	nucleus	86.27	85.44
TraesCS1A01G360100.1	Wheat	nucleus	86.27	85.44
TraesCS1A01G359900.1	Wheat	nucleus	86.27	85.44
TraesCS1A01G295700.1	Wheat	nucleus	86.27	85.44
TraesCS1A01G363000.1	Wheat	nucleus	86.27	85.44
TraesCS5A01G348500.1	Wheat	nucleus	86.27	85.44
TraesCS5A01G353600.1	Wheat	nucleus	86.27	85.44
TraesCS6A01G055000.1	Wheat	nucleus	86.27	85.44
TraesCS6A01G055200.1	Wheat	nucleus	86.27	85.44
TraesCS6A01G055400.1	Wheat	nucleus	86.27	85.44
TraesCS6A01G059000.1	Wheat	nucleus	86.27	85.44
TraesCS6A01G061300.1	Wheat	nucleus	86.27	85.44
TraesCS6A01G061600.1	Wheat	nucleus	86.27	85.44
TraesCS6A01G062800.1	Wheat	nucleus	86.27	85.44
TraesCS6A01G063100.1	Wheat	nucleus	86.27	85.44
TraesCS6A01G075200.1	Wheat	nucleus	86.27	85.44
TraesCS6A01G076700.1	Wheat	nucleus	86.27	85.44
TraesCS6A01G260700.1	Wheat	nucleus	86.27	85.44
TraesCS7A01G434600.1	Wheat	nucleus	86.27	85.44
TraesCS7A01G434800.1	Wheat	nucleus	86.27	85.44
PGSC0003DMT400078154	Potato	nucleus	86.27	85.44
TraesCS1A01G295400.1	Wheat	nucleus	86.27	85.44
Solyc06g005430.1.1	Tomato	nucleus	86.27	85.44
Solyc06g005420.1.1	Tomato	nucleus	86.27	85.44
Solyc05g054610.1.1	Tomato	nucleus	86.27	85.44
Solyc04g011390.1.1	Tomato	nucleus	86.27	85.44
PGSC0003DMT400097008	Potato	nucleus	86.27	85.44
PGSC0003DMT400078156	Potato	nucleus	86.27	85.44
PGSC0003DMT400078155	Potato	nucleus	86.27	85.44
Solyc06g072240.1.1	Tomato	nucleus	86.27	85.44
PGSC0003DMT400071314	Potato	nucleus	86.27	85.44
PGSC0003DMT400060472	Potato	nucleus	86.27	85.44
PGSC0003DMT400060471	Potato	nucleus	86.27	85.44
PGSC0003DMT400040182	Potato	nucleus	86.27	85.44
PGSC0003DMT400040121	Potato	nucleus	86.27	85.44
PGSC0003DMT400022438	Potato	nucleus	86.27	85.44
PGSC0003DMT400007674	Potato	nucleus	86.27	85.44
KRH05033	Soybean	endoplasmic reticulum	86.27	85.44
TraesCS1A01G262000.1	Wheat	nucleus	86.27	85.44
TraesCS1A01G291700.1	Wheat	nucleus	86.27	85.44
TraesCS1A01G291600.1	Wheat	nucleus	86.27	85.44
TraesCS1A01G291500.1	Wheat	nucleus	86.27	85.44
TraesCS1A01G287800.1	Wheat	nucleus	86.27	85.44
TraesCS1A01G287700.1	Wheat	nucleus	86.27	85.44
Solyc06g075830.1.1	Tomato	nucleus	86.27	85.44
TraesCS1A01G201300.1	Wheat	nucleus	86.27	85.44
TraesCS1A01G079900.1	Wheat	nucleus	86.27	85.44
Solyc11g072860.1.1	Tomato	nucleus	86.27	85.44
Solyc11g072840.1.1	Tomato	nucleus	86.27	85.44
Solyc06g075960.1.1	Tomato	nucleus	86.27	85.44
Solyc06g075930.1.1	Tomato	nucleus	86.27	85.44
Solyc06g075850.1.1	Tomato	nucleus	86.27	85.44
TraesCS2A01G417800.1	Wheat	nucleus	85.29	84.47
TraesCS7A01G178900.1	Wheat	nucleus	85.29	84.47
TraesCS5A01G216600.1	Wheat	nucleus	85.29	84.47
TraesCS7A01G434500.1	Wheat	nucleus	83.33	82.52
HORVU2Hr1G040050.1	Barley	nucleus	82.35	81.55
TraesCS7A01G408100.1	Wheat	nucleus	69.61	68.93
TraesCS1A01G403600.1	Wheat	nucleus	58.82	58.25

Protein Annotations

Gene3D:1.10.20.10	MapMan:12.1.5	InterPro:CENP-T/H4_C	GO:GO:0000786	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006334	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	GO:GO:0046982
InterPro:Histone-fold	InterPro:Histone_H4	InterPro:Histone_H4_CS	InterPro:IPR009072	PFAM:PF15511	PRINTS:PR00623
ScanProsite:PS00047	PANTHER:PTHR10484	PANTHER:PTHR10484:SF160	SMART:SM00417	SUPFAM:SSF47113	EnsemblPlantsGene:TraesCS2A01G203000
EnsemblPlants:TraesCS2A01G203000.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr2A:+:178171049..178171359

Molecular Weight (calculated)

11264.1 Da

IEP (calculated)

12.242

GRAVY (calculated)

-0.275

Length

102 amino acids

Sequence
(BLAST)

001: MSGRGKGAKG LGKGGAKRHR KILRDNIGIT KPAIRRLARR GGVKRIAGLV YGETRGVLHI FLEEVIRDVV AYTQHARRKT VTAMDVVFAL KRHGRTLYGF
101: GV

Best Arabidopsis Sequence Match ( AT1G07660.1 )
(BLAST)

001: MSGRGKGGKG LGKGGAKRHR KVLRDNIQGI TKPAIRRLAR RGGVKRISGL IYEETRGVLK IFLENVIRDA VTYTEHARRK TVTAMDVVYA LKRQGRTLYG
101: FGG

Arabidopsis Description

Histone H4 [Source:UniProtKB/TrEMBL;Acc:A0A178VF54]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.