Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| endoplasmic reticulum:
27224218
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc04g011390.1.1 | Tomato | nucleus | 97.09 | 97.09 |
| PGSC0003DMT400022438 | Potato | nucleus | 97.09 | 97.09 |
| PGSC0003DMT400040121 | Potato | nucleus | 97.09 | 97.09 |
| PGSC0003DMT400040182 | Potato | nucleus | 97.09 | 97.09 |
| PGSC0003DMT400060471 | Potato | nucleus | 97.09 | 97.09 |
| PGSC0003DMT400060472 | Potato | nucleus | 97.09 | 97.09 |
| PGSC0003DMT400071314 | Potato | nucleus | 97.09 | 97.09 |
| PGSC0003DMT400078154 | Potato | nucleus | 97.09 | 97.09 |
| PGSC0003DMT400078155 | Potato | nucleus | 97.09 | 97.09 |
| PGSC0003DMT400078156 | Potato | nucleus | 97.09 | 97.09 |
| PGSC0003DMT400097008 | Potato | nucleus | 97.09 | 97.09 |
| KRG88688 | Soybean | nucleus | 97.09 | 97.09 |
| Solyc05g054610.1.1 | Tomato | nucleus | 97.09 | 97.09 |
| Solyc06g005420.1.1 | Tomato | nucleus | 97.09 | 97.09 |
| Solyc06g005430.1.1 | Tomato | nucleus | 97.09 | 97.09 |
| Solyc06g072240.1.1 | Tomato | nucleus | 97.09 | 97.09 |
| Solyc06g075830.1.1 | Tomato | nucleus | 97.09 | 97.09 |
| Solyc06g075850.1.1 | Tomato | nucleus | 97.09 | 97.09 |
| Solyc06g075930.1.1 | Tomato | nucleus | 97.09 | 97.09 |
| Solyc06g075960.1.1 | Tomato | nucleus | 97.09 | 97.09 |
| Solyc11g072860.1.1 | Tomato | nucleus | 97.09 | 97.09 |
| KRH72633 | Soybean | nucleus | 97.09 | 97.09 |
| KRG90333 | Soybean | nucleus | 97.09 | 97.09 |
| KRG98308 | Soybean | nucleus | 97.09 | 97.09 |
| KRH02870 | Soybean | nucleus | 97.09 | 97.09 |
| KRH10345 | Soybean | nucleus | 97.09 | 97.09 |
| KRH16996 | Soybean | nucleus | 97.09 | 97.09 |
| KRH19969 | Soybean | nucleus | 97.09 | 97.09 |
| KRH24981 | Soybean | nucleus | 97.09 | 97.09 |
| KRH30345 | Soybean | nucleus | 97.09 | 97.09 |
| PGSC0003DMT400007674 | Potato | nucleus | 97.09 | 97.09 |
| KRH67535 | Soybean | nucleus | 97.09 | 97.09 |
| KRH33582 | Soybean | nucleus | 97.09 | 97.09 |
| KRH30348 | Soybean | nucleus | 97.09 | 97.09 |
| KRH30347 | Soybean | nucleus | 97.09 | 97.09 |
| KRH30344 | Soybean | nucleus | 97.09 | 97.09 |
| TraesCS4B01G350800.1 | Wheat | nucleus | 96.12 | 96.12 |
| Solyc11g072840.1.1 | Tomato | nucleus | 95.15 | 95.15 |
| KRG98309 | Soybean | nucleus | 83.5 | 88.66 |
| KRH32592 | Soybean | nucleus | 88.35 | 88.35 |
| TraesCS2B01G230100.1 | Wheat | nucleus | 86.41 | 86.41 |
| TraesCS2A01G203000.1 | Wheat | nucleus | 85.44 | 86.27 |
| TraesCS2D01G212700.1 | Wheat | nucleus | 85.44 | 85.44 |
| HORVU2Hr1G040050.1 | Barley | nucleus | 79.61 | 79.61 |
| KRG95810 | Soybean | nucleus | 97.09 | 64.1 |
| KRH05416 | Soybean | nucleus | 37.86 | 47.56 |
Protein Annotations
| Gene3D:1.10.20.10 | EntrezGene:100804633 | MapMan:12.1.5 | EMBL:ACUP02010659 | InterPro:CENP-T/H4_C | EnsemblPlantsGene:GLYMA_17G203400 |
| GO:GO:0000786 | GO:GO:0000788 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005694 |
| GO:GO:0006334 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0042393 | GO:GO:0046982 |
| InterPro:Histone-fold | InterPro:Histone_H4 | InterPro:Histone_H4_CS | InterPro:IPR009072 | UniProt:K7MMV2 | EnsemblPlants:KRH05033 |
| ProteinID:KRH05033 | ProteinID:KRH05033.1 | PFAM:PF15511 | PRINTS:PR00623 | ScanProsite:PS00047 | PANTHER:PTHR10484 |
| PANTHER:PTHR10484:SF160 | SMART:SM00417 | SUPFAM:SSF47113 | UniParc:UPI000233F4FA | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr17:-:32507014..32507325
Molecular Weight (calculated)
11388.2 Da
IEP (calculated)
11.731
GRAVY (calculated)
-0.377
Length
103 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGRGKGGKG LGKGGAKRHR KVLRDNIQGI TKPAIRRLAR RGGVKRISGL IYEETRGVLM IFLENVICDV VTYTEHARRK TVTAMDVVYA LKRQGRTLYG
101: FGG
101: FGG
001: MSGRGKGGKG LGKGGAKRHR KVLRDNIQGI TKPAIRRLAR RGGVKRISGL IYEETRGVLK IFLENVIRDA VTYTEHARRK TVTAMDVVYA LKRQGRTLYG
101: FGG
101: FGG
Arabidopsis Description
Histone H4 [Source:UniProtKB/TrEMBL;Acc:A0A178VF54]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.