Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH30344 | Soybean | nucleus | 91.75 | 86.41 |
| Zm00001d042954_P001 | Maize | nucleus | 91.75 | 86.41 |
| Zm00001d020585_P001 | Maize | nucleus | 91.75 | 86.41 |
| TraesCS2D01G413100.1 | Wheat | extracellular, golgi, nucleus | 91.75 | 86.41 |
| TraesCS2B01G436700.1 | Wheat | nucleus | 91.75 | 86.41 |
| KRH72633 | Soybean | nucleus | 91.75 | 86.41 |
| KRH67535 | Soybean | nucleus | 91.75 | 86.41 |
| KRH33582 | Soybean | nucleus | 91.75 | 86.41 |
| KRH30348 | Soybean | nucleus | 91.75 | 86.41 |
| KRH30347 | Soybean | nucleus | 91.75 | 86.41 |
| KRH30345 | Soybean | nucleus | 91.75 | 86.41 |
| KRH24981 | Soybean | nucleus | 91.75 | 86.41 |
| KRH19969 | Soybean | nucleus | 91.75 | 86.41 |
| KRH16996 | Soybean | nucleus | 91.75 | 86.41 |
| KRH10345 | Soybean | nucleus | 91.75 | 86.41 |
| KRH02870 | Soybean | nucleus | 91.75 | 86.41 |
| KRG98308 | Soybean | nucleus | 91.75 | 86.41 |
| KRG90333 | Soybean | nucleus | 91.75 | 86.41 |
| KRG88688 | Soybean | nucleus | 91.75 | 86.41 |
| KRH05033 | Soybean | endoplasmic reticulum | 88.66 | 83.5 |
| KRH32592 | Soybean | nucleus | 84.54 | 79.61 |
| HORVU1Hr1G070700.1 | Barley | nucleus, plastid | 91.75 | 68.99 |
| CDY06269 | Canola | endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 75.26 | 65.18 |
| Os05t0462900-00 | Rice | nucleus | 64.95 | 63.64 |
| TraesCS1A01G403600.1 | Wheat | nucleus | 61.86 | 58.25 |
| KRG95810 | Soybean | nucleus | 91.75 | 57.05 |
| KRH05416 | Soybean | nucleus | 41.24 | 48.78 |
Protein Annotations
| Gene3D:1.10.20.10 | MapMan:12.1.5 | UniProt:A0A0R0EXQ1 | EMBL:ACUP02010866 | InterPro:CENP-T/H4_C | EnsemblPlantsGene:GLYMA_18G064400 |
| GO:GO:0000786 | GO:GO:0000788 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005694 |
| GO:GO:0006334 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0042393 | GO:GO:0046982 |
| InterPro:Histone-fold | InterPro:Histone_H4 | InterPro:Histone_H4_CS | InterPro:IPR009072 | EnsemblPlants:KRG98309 | ProteinID:KRG98309 |
| ProteinID:KRG98309.1 | PFAM:PF15511 | PRINTS:PR00623 | ScanProsite:PS00047 | PANTHER:PTHR10484 | PANTHER:PTHR10484:SF160 |
| SMART:SM00417 | SUPFAM:SSF47113 | UniParc:UPI00023DA293 | : | : | : |
Description
hypothetical protein
Coordinates
chr18:-:5871943..5872236
Molecular Weight (calculated)
10851.4 Da
IEP (calculated)
11.887
GRAVY (calculated)
-0.555
Length
97 amino acids
Sequence
(BLAST)
(BLAST)
1: VARGLGKGGA KRHRKVLRDN IQGISKPAIR KIARRGGVKR ISGLIYEETR GVQKNFLENV IRDAVTYTEH ARRKTVTAMD VVYALKRQGR TLYGFGG
001: MSGRGKGGKG LGKGGAKRHR KVLRDNIQGI TKPAIRRLAR RGGVKRISGL IYEETRGVLK IFLENVIRDA VTYTEHARRK TVTAMDVVYA LKRQGRTLYG
101: FGG
101: FGG
Arabidopsis Description
Histone H4 [Source:UniProtKB/TrEMBL;Acc:A0A178VF54]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.